Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->ANAC58                                                                          <----------DOF2                                                                         <---------ANAC58                                    <XXXXXXXXXXXXXXXXXXXXMIR844          <---------ANAC58                                 <---------ANAC58                       <---------At4g35610   -------                                 <---------ANAC46                  <---------MYB46(3)   --------->GLK1(2)         <-----------RAV1(1)     <---------ANAC58              <---------TOE1(3)--------->ANAC58  ------>MYB83            ------->TEIL                         <---------TOE2(3)--------->ANAC46  ------>MYB46(1)       <---------ZAT14                       ---------->DOF2 <---------------AGL15 ---------MYB59         --------->ZAT14                       <---------DOF5.7(2)  ---------->DOF2 -------->AtMYB61       <---------ZAT18             --------->MYB46(3)  --------->At4g35610   ------- ->GT1   <---------MYB46(3) <---------DAG2          <---------ALFIN1 <---------MYB52(1)<---------GLK1(2)   aaccaaaccaattgttgcagtttcagtgaacctttccttgtaagtagttttgccacaactgagttaaagttgttagctttccactcaaagaatctatctt  16058500                              --------->ZAT6                           <---------ATHB12       --------->ZAT6  --------->MYB46(3)    ------>ZmHOX2a(1) --------->ANAC58                                                             <-   <---------MYB59    --------->ANAC58      --------->YAB1        ----------->GT1                ---- -->TOE2(3)         --------->MYB46(3)     --------->ICU4        <---------ZAT6          ------------ -->YAB1          --------->ANAC46         <---------ATHB12      ----------->GT1     <---------GLK1(2)   aaattcctaacacttggttcaaacaaccaataacacaagattgcaattatcaactaaactaaaacaagtgttaaatagaaatgaactgattctcaaaatt  16058600          <---------ANAC58                                                       <---------GLK1(1)          <---------ANAC58                                                       --------->GLK1(1)          <---------ANAC46                                                      <---------ARR14(2)   <---------DAG2                                           <------ZmHOX2a(1)   --------->ARR11(3)  <---------HSFB2a(1)     <------MYB46(1)                --------->HSFB2a(2)    --------->ARR14(2)  --------->HSFB2a(1)     <------MYB83         --------->HSFB2a(2)              <---------ARR11(3) -----ZmHOX2a(1)        <--------P             <---------HSFB2a(2)     <---------LBD16          <---- ----->MYB59           <---------MYB52(1)     --------->REM1(2)       <---------ANAC46         ------ ----->AGL3 <---------ANAC46           <-----------GT1   <---------HSFB2a(2)   <------ZmHOX2a(1)-----   aggaaccttttctcgtgtggaaaccagtaggtttgcagtttttgcccttgtagaagtctctaggagctcgttttggggagaggatatcaagagaagaagc  16058700                ------>ZmHOX2a(2)             --------->YAB1                                                                ==========           <---------WOX13(1)                                                              ------>ZmHOX2a(2)        <---------YAB1--------->ARR14(2)  ------>ZmHOX2a(1)                              <---------ARR11(3)      <---------At4g35610      --------->YAB1                                            --------->ARR11(3)      --------->At4g35610      <-----------GT1   <-----------TGA1            --------->bZIP60(1) <----------DOF2=================================HOX2a_HOX2a                 --------->GLK1(1) -----ARR11(3)  ==============================HOX2a_HOX2a                    <---------GLK1(1) --->At4g35610<---------ARR11(3)       ------>ZmHOX2a(1)                     <---------bZIP60(1) ---->ARR11(3)--------->ARR11(3) --------->MYB46(3)        ----------->RAV1(1)      <---------MYB46(3)   tctctttcttctgaatgatcttccaatccccattaacaatcctcctatcgtcgtcattctccaacaatgtattagactgatatcagtcgttgatcttaaa  16058800                                                                                                   --                                                                                                   <-                                                                        <------MYB83            <----                                                                        <------MYB46(1)         <----          ----------->HVH21                                            <---------TOE1(2)        <----      <------ZmHOX2a(1)             ----------->GT1                   <--------P               <-----  ---------->DOF2         <---------ARR14(2)                        <---------REM1(1)   <---------DOF5.7(2) ============HOX2a_HOX2a <---------CCA1(2)         *TSS         <---------TOE2(3)    --------->At5g28300   aaaaaaaaggacctgatagaagagtgcaaatctcagagaggtcaaattaggggtttttgttcaagtgaggttgtaggttgaagacactgtaaacgatgtc  16058900         ----------->ARR10      --------->At5g28300     ----------->GT1   <---------ANAC46 ------->ARR14(2) --------ARR14(2) -----ANAC46        <------------CBF -----ANAC58   ----------->GT1    <------ZmHOX2a(1)                                 <-----------GT1 -----ANAC58 <---------LBD16     --------->ANAC46              ----------->GT1   <---------ICU4 ------------------TaNAC69(2)  <---------LBD16--------->ZAT6------->TEIL        --------->ICU4  -----   gtatagggggtaaaattcggaaaattgttgttttcaggaaactatctgactctaaacaaatgaaactgaaaatataggggtcatatttacaaattagtta  16059000            <---------ANAC55(2)            --------->ANAC58            --------->ANAC58            --------->ANAC55(2)            --------->ANAC55(1)           ------->TEIL   <-------GAMYB                                         >>>>>>>>>ARR2           <---------TOE1(2)     <---------ARR11(3)                             >>>>>>>>>ARR1           <---------TOE2(2)<---------REM1(1)                                  --------->ATHB12        --------->ANAC46 <---------MYB46(3)                             <---------ANAC58        --------->ANAC58 <-----------RAV1(1)                            <---------ANAC58 --------->ANAC58        --------->ANAC58 --------->MYB52(2)      <---------ICU4         <---------ANAC46 --------->ANAC58 ---->ARR11(3)    <---------AHL20(2)  <---------AHL20(2) --------->MYB52(1)   <---------YAB1   tcttcgatttacgcacgtattatatgtttgttgtagatgtttattttctaagtattgcataacgcataatgttttcttgtatgattgtatcaagctattc  16059100                                                            <---------AHL20(2)                                                            --------->AHL20(1)                      <                                                           --------->YAB1                           <                                                           <---------AHL20(2)                       -                                                           <---------ICU4                           -                              <---------ARR11(3)           --------->AHL20(2)                      --                            <---------ARR11(3)             -------->ATHB1                         <--                            --------->ARR11(3)             <--------HAHB4                      <-----                            <---------AHL20(1)             --------->ATHB51 <---------ANAC58   <-----                     <---------ANAC55(2)--------->LBD16   --------->ICU4    <---------ANAC55(2)<-----                     ----------->GT1   --------->DEAR3(1) <---------ATHB12  <---------ANAC58   ------                --------->YAB1--------->ARR11(3)          <---------ATHB51  ----------->GT1   ------>MYB83               <---------ATHB12       --------->ANAC46  --------->WOX13(1)  <---------ANAC46  ------>MYB46(1)               --------->ICU4 --------->AHL20(1)      <---------YAB1<---------CCA1(2)     >>>>>>>>>>MYB80   tactatgtgaacatccaattatcaagtgaatatatattccaccgcataaacatgttatcaattattttgtatatcgtttcgtgaaaatatcaaaccaaat  16059200 --------------->AGL15 <---------------AGL15 -----------------AGL2 -----------------AGL3 ---------------->AGL2 ---------------->AGL3            <---------YAB1 ------>P                       <------ZmHOX2a(1)                                --------->ZAT6 ---------GT1                   --------->YAB1             ---------->DOF2 --------->At4g35610 ----ARR11(1)                 <---------TOE1(3)         --------->TOE2(3)  --------->HSFC1(2) ------ARR10                  <---------TOE2(3)        >>>>>>>>>MYB98      <---------HSFB2a(1)      - ----ARR14(2)            <------ZmHOX2a(1)           ------>ZmHOX2a(1)     <---------HSFC1(2) ------- --->ARR14(2)        ---------->DOF2                <---------MYB59     <------ZmHOX2a(1)  >>>>>>>>>>GATA-1   ctaccatttttagaatagcacaaaaaaggattaaggataatagaagaacagagtcctaacttaaagcttagtgaggaagcttcacactcgtattatcgtc  16059300                                        --------->ATHB51                                        --------->YAB1                                        -------->ATHB1         <---------ANAC58                               --------->ANAC46                <---------ANAC58      <---------At4g35610                               --------->ZAT6             <---------ICU4          <---------ZAT14                <-------TEIL<---------REM1(2)   --------->ARR11(3)   ------>ZmHOX2a(1)     ---------->DOF2        --------->ZAT14    <---------CCA1(2)<----------DOF2   <---------At4g35610 -------->AHL20(2)   <---------ATHB12  <---------YAB1    --------->ICU4           --------->At4g35610 -->TOE2(3)    --------->CCA1(2)    <---------YAB1       <---------YAB1 --------->YAB1     --------->ZAT14   aataaaacaaagacgagatacaaatgactcttcacactactattattgtttatcttgtgatgattcctttcctatcaaaatgtctgcagcaacttcactc  16059400  Previous    Next  AGI:  At5g40080.1    Description:  60S ribosomal protein-related. similar to 60S ribosomal protein-related [Arabidopsis thaliana] (TAIR:AT5G39800.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82662.1); contains domain PTHR21338 (PTHR21338) Range:  from: 16057173    to: 16058851    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g40090.1    Description:  ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor. similar to disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT1G17610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16318.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain NB-ARC; (InterPro:IPR002182) Range:  from: 16059147    to: 16060722    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version