Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                                                                                                 <---                    --------->AHL20(2)                                                     <---------ARR11(3)                    <---------AHL20(2)                                   <----------DOF2   --------->ARR11(3)            <---------TOE2(3)          <---------YAB1                <---------GLK1(2)  --------->AHL20(2)  <-----------GT1 <---------YAB1    --------->ICU4      <---------AHL20(2)              <---------AHL20(2)   ttttatactggattaatgttattaaaacattttcgaacattatgaaattttccaacattttataacaaatagatactttatattatacatataaatcttc  16043100           --------->CCA1(2)                                <---------WOX13(1)          --------->ARR14(2)                               <------------CBF          <---------ARR14(2)                              <---------ICU4        --------->ANAC58                                  --------->ATHB12        --------->ANAC46                                 --------->AHL20(2)        --------->ARR14(2)        --------->ANAC58                               --------->YAB1             <---------CCA1(2)  <-----------HVH21                                    --------->TOE2(3)    <---------AHL20(2) ----------->HVH21                              --------->ZAT6             <---------AHL20(2)       < -------->At5g28300                      <---------ANAC46<---------AHL20(2)--------->AHL20(2)    ---- -----------HVH21              <-----------GT1<-----------GT1         ------------>CBF        <------ ------At5g28300     <-----------GT1--------->ATHB12--------->YAB1   <-----------GT1         <-------   accgtgacacacgatacgagtattatccactagtaacttcattgggtttaacactaatattaattgctatttaacaattaaatcaaatctccattttacc  16043200                                                          <---------AHL20(2)                   <-----     <-------TEIL                                     --------->AHL20(2)                  ----------- ---------ALFIN1                                      --------->AHL20(1)                 --------->TOE2(3) ----->ANAC46                           --------->YAB1<---------AHL20(2)             --------->MYB46(3) ---At5g28300                         ------>ZmHOX2a(1)   --------->AHL20(2)        ------------>CBF ----GT1                      ------->TEIL           --------->AHL20(2) ---------->ID1   --------->YAB1   ctccacatacagagccactgtttcaaattttgaatctctccttcataaaaaaaaaaaaaattaaacacatttttgtttttttcttcaacaatctcaatgt  16043300                                         --------->bZIP60(2)                                     <-----------HVH21                                              <                             --------->AtMYB61                                                      -                             <---------ALFIN1                        --------->ANAC46          <-----     --------->ARR14(2)  --------->WRKY38(1)           <---------WRKY18(1)                   ========     <---------ARR11(3)  --------->WRKY45--------->O2 --------->WRKY38(1)                    --------     <---------ARR14(2)  --------->WRKY12--------->bZIP60(1)     ----------->RAV1(1)   --------->GLK1(2)     --------->ARR11(3)<----------DOF2   <---------bZIP60(1)    --------->MYB46(3)    <---------GLK1(2) ----ARR11(3)<----------DOF2--------->MYB46(3)        ----------->HVH21   --------->ANAC46=========== ->CBF   ------>ZmHOX2a(1)<---------WRKY18(1)         --------->WRKY12----------->RAV1(1) <----------DOF2   cttcaaaaatcctctctttctctctctttgaccacctcgagtcacatcacagagccttgaccatcaacaacacaacacaaaacccatagattctttaaag  16043400                   <---------O2                   --------->TGA1a     <----------DOF2     ========================bZIP_DOF                                          <---------ICU4  --------->ARR11(3)                                                         ------->TEIL  <---------ARR11(3)        --------->YAB1                                  <---------CCA1(2) ---------HSFC1(2) --------->O2                                       <---------ARR14(2) -------->HSFC1(2) <---------TGA1a  <<<<<<<<<TBF1 --------->YAB1      <---------ARR11(1) ----TOE2(3)<----------DOF2<------ZmHOX2a(2)     --------->ICU4       --------->ARR14(2) ============================bZIP_DOF            <---------YAB1       --------->ARR11(3) -->DOF2    =================bZIP_DOF         <---------MYB52(1)      <---------ARR11(3)        <<<<< ============================bZIP_DOF  <<<<<<<<<TBF1<---------YAB1   <---------CCA1(2)  <---------GLK1(2)   gaaacatctttcttctttctcacttgtcgatcatcttcttcttcttcagttattatgagtaaacaaactccaaatcttgaatctttacaagattgttctt  16043500                                            --------->ANAC58                                            --------->ANAC58                                        --------->ANAC46                                        --------->ANAC58                                        --------->ANAC58                                       ------>ZmHOX2a(2)                                       <---------LBD16                                      <------ZmHOX2a(2)                                     --------->ARR14(2)                                     <---------ARR14(2)                                  --------->HSFB2a(2)                                  <---------HSFB2a(2)                                 <---------LBD16                                                   --                               --------->GLK1(2)                                            ---------     --------->YAB1           <---------GLK1(2)                                         --------->ZAT6 <<<<TBF1                 <---------ZAT18--------->LBD16                      <---------MYB52(1)   <-   cttccaattacaacaatgccaatgctagtccagtttctggatccgcaagcttcaaaactagcagtaatggctctgaagacgttaggcttaacaatagtat  16043600                 --------->At5g28300          <-----------RAV1(1)                                 <---------------------WRI1 ------->At4g35610                              ---------->DOF2                               <------ >YAB1 --------->GLK1(2)<---------ZAT6      <---------HSFB2a(2)   --------->AtLEC2      --------->DAG2 --------At4g35610----------->HVH21  <---------At4g35610  <---------ATHB12            ---------->DOF2   cagcttaagtttctgtagcagtaacagtgtaagcagtgaagctaatctcgaaaagactcaatctttcgatgcaaacgaggctaatttcaaaagggtcttt  16043700                                                                                      <---------ZAT18                                                                          <------ZmHOX2a(2)                           ------>ZmHOX2a(2)                             <-----------ARR10                         <---------ARR11(3)                              <---------AGP1                 <---------TOE2(3)                                       --------->ARR14(3)                --------->DAG2                                           --------->ARR11(3)               ---------->DOF2        --------->ANAC58    <---------ZAT14<---------ARR14(3)           --------->LBD16<------ZmHOX2a(2)               --------->ZAT18--------->GLK1(2)        <--          --------->RAP2.6(2)         --------->ANAC58    --------->ZAT14--------->ARR14(2)      ----  ===============================HOX2a_HOX2a             --------->ALFIN1<---------ARR14(2)      <---  ------>ZmHOX2a(1)      --------->ARR11(3)     <---------GLK1(2)        <---------ARR11(3)  --------  ================================HOX2a_HOX2a--------->YAB1 ----------->GT1------>ZmHOX2a(2) <------- ----DOF2 ----------->RAV1(1)      ----------->HVH21   <---------ANAC46 <------ZmHOX2a(1)    <-------   gctccttcgaagccgcataaaggaaacgatcttagatgggacgcgattcagaatgtgaagtgtagtaaaaacgaggatctgggtttagggcattttaggt  16043800                      --------->CCA1(2)                     --------->ARR11(3)       <---------At4g35610                                   -     --------->ARR11(3)                       --------->At4g35610                                  <- -----GAMYB          <---------ARR14(2)       --------->ZAT2                               <---------TOE2(3) ----->MYB111(2)     <---------ARR11(3)       <---------ZAT2                 ---------->DOF2    ----- ------MYB46(3)    ----------->ARR10     <---------At4g35610        <----------DOF2       --------->DAG2 ->MYB59        --------->ALFIN1         --------->At4g35610   --------->HSFC1(2)   <---------WOX13(1) --TOE1(3)    <---------ANAC46 --------->ALFIN1                <---------HSFC1(2)   <---------ANAC46< --TOE2(3)    --------->ALFIN1 <---------ANAC46        --------->CCA1(2)   <---------YAB1---------->DOF2   tgttgaagaaattgggatgtggagatattgggagtgtgtatttagctgagctcagagagatgggatgtttctttgctatgaaagtgatggataaaggaat  16043900         <------ZmHOX2a(1)        <------MYB46(1)                                              <---------ANAC58        <------MYB83                                        <------ZmHOX2a(2)      <--------P                                           <---------ARR11(3)    <------MYB46(1)                                  --------->MYB52(2)  <---------ANAC58    <------MYB83                           <---------GLK1(2)=============HOX2a_HOX2a  <---------WOX13(1)                       <---------ARR11(3)        <---------ANAC58 -------->ATHB12         <---------At4g35610         <---------MYB46(3)  <---------ANAC58 --------YAB1            --------->At4g35610--------->GLK1(2)     ------>ZmHOX2a(1)           ------- ---->ICU4   --------->ARR11(3)            --------->ARR11(3)     <----------DOF2--------->ZAT14 ---------MYB46(3)<---------MYB46(3)      <---------RVE1(1)--------->ARR11(3)   <----------DOF2   gttgattggtaggaagaaattggttagagctcagactgagagagagattttgggtttgttagatcatcctttcttgcctactctttactctcatttcgag  16044000  Previous    Next  AGI:  At5g40030.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G47750.1); similar to stpk1 protein kinase [Solanum tuberosum] (GB:CAA62476.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 16043455    to: 16045511    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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