Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->TOE2(3)                  <-----------GT1  <-----------GT1                         --------->TOE1(3)      --------->YAB1 -->ZmHOX2a(1)                   --------->AtLEC2               <---------ATHB12 ----ANAC58                      ----------->GT1            --------->AHL20(2)              --------- ----ANAC58               --------->AtMYB61                 <---------AHL20(2)  <----------DOF2    --   tgtgataccatctatttcaatagttgcaccataccatgtaaaaacctgaatagtagagcaatataaatcatcaagagtataactttctatgttatctcaa  16004200                               <----------DOF2                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                                    ---------->DOF2                            --------->AGP1                                   --------->ANAC58                            <---------AGP1------->GAMYB                      ----------->GT1                            <---------ARR11(3)                               --------->ANAC58                   ---------->DOF2      -------->P                       <---------ANAC55(2)                 <---------MYB59       --------->MYB52(1)                --------->ANAC55(2)                 --------->TOE2(3)   <---------MYB52(2)                  <---------ANAC58           <---------ICU4   --------->ARR11(3)                           <---------ANAC55(1)      <--      <---------YAB1       <---------CCA1(2)      <---------ZAT18        <---------ANAC58   --------- >TOE2(3)  --------->YAB1 ----------->ARR10--------->ANAC46  ------->TEIL<---------ANAC46--------->SPL7 ------->YAB1   <---------ANAC55(2)<-----------GT1--------->ZAT18       <-----------------------TaNAC69(2)   ttcataacatcattcattacctaaagcttagatctttaaactaacccacaagtccacaagatgaattttgaagttgcgtaagtaaaaagcataccgcaaa  16004300                                                            <---------ANAC58                                                            <---------ANAC58                                                    <-----------ARR10                            <---             <---------GLK1(1)                      --------->ARR11(3)                           <---  <---------YAB1                                    <---------ARR11(3)                          ----- ---------HVH21      ------>ZmHOX2a(2)         --------->RAP2.6(2)                      ----------->GT1 >LBD16  --------->ALFIN1               <-------TEIL--------->GLK1(2)     --------->MYB52(1)    -----   tgtcatgagaggtggaaatgtgatccaaacttcatgtggaagttcatagccgaaaatctcagccttgccatcgagcaaacggagtctgagaggtgaagta  16004400                                                                       ---------->ID1          --------->GLK1(2)                                  <---------ATHB12 ---MYB46(1)                                                ------>MYB46(1)                       --- ---MYB83<---------GLK1(2)                                  ------>MYB83          --------->GLK1(1) ---->MYB111(1)   <---------ZAT18                         <---------MYB59         <---------GLK1(1)-- ---->MYB59       --------->ZAT18    --------->ZAT14   <------ZmHOX2a(1)      --------->YAB1<--------   ggttgcaattcgattctgagttcgctctgtttctccaacttcactcgtcttatttgaggaccaaacatgttttgtctctatcagatttctcaagaagaca  16004500                                                    --------->At4g35610                                          <---------HSFB2a(2) ------->DOF2                            <---------LBD16 ---------->DOF2 ------->DAG2              ---------->DOF2--------->HSFB2a(2)        <----------DOF2          ------- --ID1                    <---------AHL20(2)     <------ZmHOX2a(1) *TSS                    ------->TEIL   aaaagtttgatgggacttaagttcggatttaaagagttcaatttctggagaggaagatgaaaagtttctaactttgaattccatattccgatgtatcgag  16004600                                                <------NtERF2                                               ------>NtERF2                                               ----------->RAV1(1)                                              <---------DEAR3(1)                                             --------->At4g35610                                             <---------LBD16                                       <-                                          <---------At4g35610                                      --                                --------->AHL20(2)                                                 <-                  --------->ANAC58        <---------ZAT2                                          ---                  --------->ANAC46        --------->At4g35610                                   <----        <-----------HVH21       <---------AHL20(2)                                       <------NtERF2      --------->HSFC1(2)       <---------AHL20(1)                                       ------>NtERF2      --------->HSFB2a(1)      <---------AHL20(2)                    ---------->ID1    <---------ANAC46      <---------HSFC1(2)       --------->AHL20(1)  --------->ANAC58  <---------CCA1(2) <---------DEAR3(1)      <---------HSFB2a(1)      --------->AHL20(2)  --------->ANAC58<---------ANAC58    --------->DEAR3(1) -->HSFB2a(2)     --------->ANAC58        --------->ZAT2           <---------ANAC58 --------->ANAC46   aattacgaagcgtcgcattcaaggaagaaagaatttatttagatagctgcggcacaaaactccattctttcgtctctctcatgtaaacggcgtcgtttta  16004700                <------NtERF2               ------>NtERF2              --------->DEAR3(1)              <---------ANAC46         --------->MYB52(1)      --------->ANAC58      --------->ANAC58                      --------->ATHB12 --------DAG2 <---------DEAR3(1)   --------->YAB1 ------------->AGL15               <---------ICU4                                *TSS<---------AHL20(2) --------------AGL15              <---------ATHB12        <------------CBF   <-----------GT1 -------------->AG                --------->ICU4  <---------ANAC58           --------->MYB52(1)    -- -------GT1 ------->GAMYB       --------->YAB1    <---------ANAC58   --------->MYB52(1)         <----   gccttatgaagcaacggcgtcgttttggtatctctaatcatcatcttcatttgcttctcaaattgagaacttaagggtttaacggatttattttggtcat  16004800                        <---------TOE1(3)                        <---------TOE2(3)                       <---------DOF5.7(2)                      --------->WRKY12                                                          -----    <---------GLK1(2) ----------->TGA1                           <---------ANAC58           <-------- --------->YAB1       ----------->HVH21          ---------->DOF2 <---------ANAC46           --------- ----->TEIL          --------->DOF5.7(2)       <------ZmHOX2a(2) <---------ANAC58          --------->GLK1(1) -----YAB1         <---------MYB46(3)        <------ZmHOX2a(1) <---------YAB1              <---------GLK1(1)   gaatcagagtctttgcaatagtcgttgacgttagaattcgataagtaggatcaaagttcggaattttgagtgtgtaatgagcttgaatttggcaaatcct  16004900                                                                                 <---------RAP2.6(3)                                                <---------KAN4(2)                ------>NtERF2                                            <------ZmHOX2a(1)                   <---------ETT(1)                                      <------ZmHOX2a(1)                         ----------->HVH21                                   <-----------RAV1(2)           <---------------AGL15----------->GT1        ------>ZmHOX2a(1)          --------->YAB1                <----------DOF2--------->RAP2.6(2) ->ZmHOX2a(1)           <---------ANAC46   ----------->GT1 <---------ALFIN1     --------->DEAR3(1) -ARR14(2)       <----------DOF2  <---------ATHB12    <---------At5g28300     --------->At4g35610 >ARR14(2)  ---------->DOF2     --------->WOX13(1)   <-----------GT1          <---------At4g35610   gtatgggttcctgtaaaagctttgttatgtagaacaatcaggagaaggagaattttcactgccactgctataactagtttagccgacaaggtaaaaactt  16005000                                                                      --------->DAG2                <                                                                     ---------->DOF2                <                                                           <---------ANAC58                         <                                                           <------MYB46(1)                        <--                                                           <---------ANAC58                    <-----                                                           <------MYB83--------->DAG2      <---------ZAT18                  --------->GLK1(2)                       <---------MYB46(3)               --------->ZAT18                 <---------ARR14(2)                   <-----------RAV1(1)         <------ZmHOX2a(1)<-        <---------AHL20(2)<----------DOF2             <---------MYB46(3)      ---------->DOF2<-------   cgcttagtaatttatagcagtttctgttctttgtttgttttgttttgtctgaattgttgttgggttcttaaaaaagggggaaaaggatgagagtgagctt  16005100  Previous    Next  AGI:  At5g39930.1    Description:  similar to pre-mRNA cleavage complex family protein [Arabidopsis thaliana] (TAIR:AT3G04680.2); similar to pre-mRNA cleavage complex family protein [Arabidopsis thaliana] (TAIR:AT3G04680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14899.1); contains InterPro domain Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655) Range:  from: 16002253    to: 16004567    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g39940.1    Description:  oxidoreductase. similar to unnamed protein product [Vitis vinifera] (GB:CAO14889.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain HI0933-like protein (InterPro:IPR004792) Range:  from: 16004781    to: 16007929    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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