Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                      <xxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      <xxxxxxxxxxxxxx                                    --------->YAB1                                 xxxxxxxxxxxxxxxxxx                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          xxxxxxxxxxxxxxxxxxxxx                            --------->ANAC46                      <---------AHL20(2)xxxxxxxxxxxxxxxxx                            --------->ANAC58                  <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxx                         <---------WRKY38(1)                  --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxx                      <---------At4g35610              <---------WRKY12        --------->YAB1             <-----------GT1--------->ANAC58           <---------WRKY38(1)     <---------ICU4 ------>STY1(2)       --------->At4g35610             --------->WRKY18(1) --------->AHL20(2)xxxxxxxxx   agatagcgatatgtttttctggtctgctcaacgcattttcatatttcaaactgctggtcaatgtttaatttatgtataaaataatcacatgtgaagttga  15959600            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           <xxxxxxxxxxxxxxxxsmallRNA(i)        <-----------HVH21 xxxxxxxxx>smallRNA(le3) xxxxxxxxx>smallRNA(fl3) xxxxsmallRNA(s) xxxsmallRNA(s) xxsmallRNA(s) xxxxx>smallRNA(le3) xxxxxxxxsmallRNA(i2)                                             --------->DEAR3(2) xxxxx>smallRNA(l2)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xx>smallRNA(i2)                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxx>smallRNA(i2)             <---------AHL20(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) x>smallRNA(i2)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   ----------->GT1                         < x>smallRNA(l2)    ---------->DOF2            <-----------GT1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) - xxxxxxxxxxxxx>smallRNA(fl3)    --------->AHL20(2)   <---------YAB1                    ---------->DOF2   tgtataaaactgtcacaatttgaaagttggagtattaaatgacatttttctcatttcgattatggtgaaacgacgttgtattggaaactaaaagagacta  15959700                           <--------P    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          --------->At5g28300                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->AHL20(2)                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     <---------ATHB12          <---------WRKY12                       --------->At4g35610                      --------->AHL20(2)        <---------WRKY38(1)                 ------>ZmHOX2a(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)        ------>NtERF2                <------ZmHOX2a(2)    <---------ANAC58           <---------ATHB51   <---------ZAT18               <---------ARR14(2)    <---------ANAC58           <---------AHL20(2) --------->ZAT18 --               <---------AGP1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               --------->ARR14(2)    <---------ANAC46       --------->MYB46(3) <-----------RAV1(1) <-              <---------ARR14(1)--------->MYB52(1)   --------->ICU4       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <---------CCA1(2) <---------DOF5.7(2)<---------AtLEC2     <---------AtLEC2 <------ZmHOX2a(2)     xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---------DOF5.7(2) <---------MYB52(1) <---------ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     ----- -------->MYB52(1) <-----------HVH21xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   gttaacggatgttatcggatctgttagcggtagataacgtcgtgtgtattttggcatgatcaacaaataattttgtatgaaatggtgcccgatcaacgta  15959800                                                 <---------DAG2                                                 <----------DOF2                                              <---------AHL20(2)                                           --------->YAB1                                           -                                           <---------ICU4                                           -         <---------AHL20(2)               --------->AHL20(2)                                        <        xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------AHL20(2)                                        <        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <-----------GT1                                      --    <---------AHL20(1)                    <---------ATHB51                                     ------    --------->AHL20(1)                    --------->ICU4                                       <----- --------->AHL20(2)   --------->ANAC46   <---------AHL20(1)                                --------->AHL20(2) <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     --------->YAB1                                     <---------AHL20(2) ------->AHL20(2)  --------->ARR14(2) --------->AHL20(2)                                --------->YAB1 --------AHL20(2)  <---------ARR14(2)--------->AHL20(2)        <---------ANAC46         --------->AHL20(2) -->TEIL--------->AHL20(2)           <---------AHL20(2)      <---------ANAC46     --------->TOE2(3)--   tttttatatattaaatggccatatacgaagttcacatatttaaaataattactttttaaaatttcgcgtataaaatgcaatatttcttaataaaaaaata  15959900      <---------DAG2                                      --------->AHL20(2)      <---------------AGL15                               <---------AHL20(2)      <----------DOF2                                    --------->AHL20(2)      --------------->AGL15                          <---------ATHB12 -------->ARR14(2)                                --------->AHL20(2) -------->ARR11(3)                                <---------AHL20(2) ---------ARR11(3)                               <---------AHL20(2)                                 < ---------ARR14(2)                               --------->AHL20(2)                                 - ------->CCA1(1)                              --------->AHL20(2)                                    - --->AHL20(2)                                --------->AHL20(2)                                     < ----AHL20(2)        <-----------GT1         <---------AHL20(2)                          <---------MYB52(1) ------->RVE1(1)   <-----------GT1       --------->AHL20(2)                        <----------DOF2  <   aatatctgcttttttgggttttttcacaacaaaataacacatataaaataaataaatcatttattttctaaattactagagagggcatttcggtatttca  15960000                --------->At4g35610               --------->ANAC58               --------->ANAC58             ------>ZmHOX2a(1)                    <-----------GT1       <<<<<<<<<TBF1                     --------->TOE2(3) -----------ARR10                      --------->GLK1(2) -------->ARR11(3)        --------->AHL20(2)    <---------AHL20(2) -------->ARR14(2)        <---------AHL20(2)   --------->AHL20(2)                              <----- ---------ARR11(3)       *TSS       <---------TOE2(3) --------->LBD16                    --------->HSFB2a(2) ---------ARR14(2)    --------->ANAC46<---------GLK1(2)      <-----------GT1            <-----------GT1   agtatcttcttcttcctaagctacacaaaaaattatctaagattcttaattttatccaggtttttgccaaatcgactggtctcagagttttctcgatttt  15960100                                                                 ------>NtERF2                                                              <---------ATERF1(1)                                                             <---------ETT(2)                                                             <---------DEAR3(1)                                                             --------->ETT(2)                                                             <---------WRKY38(1)                                                             <---------WRKY12            --------->ANAC58                              <------MYB46(1)            --------->ANAC58                       ------->TEIL --------->ANAC46          <-----------RAV1(2)              --------->YAB1 <---------MYB46(3)         <-------TEIL                   ------>MYB46(1)   <------MYB83   ---------->DOF2                    <---------MYB59    <---------AtMYB61=========================== ----AHL20(2)           <----------DOF2 ------>MYB83  <-----------RAV1(1) <----------DOF2   ttttggaaagatgcaggtaatagcatctttctgttcgaaacctaatgagaatgaatttgttggtcgacgacaacttctttcttcagtctgttccaaaatt  15960200                       ------>MYB83                       ------>MYB46(1)                      <---------ALFIN1                     --------->DEAR3(1)                     <---------MYB111(2)                     --------->MYB46(3)              <-----------HVH21            <---------DEAR3(2)        --------->TGA1a--------->MYB52(1)        <---------TGA1a-------->P        --------->bZIP60(2)        --------->DEAR3(1)        <---------bZIP60(1)        <---------bZIP60(2)                 --------->ANAC58        --------->bZIP60(1)  --------->ARR14(2)        <---------O2 <---------MYB55(2)     --------->ANAC58        --------->O2--------->ANAC58    --------->ANAC58        ========================MYC_MYB --------->ANAC58       --------->ATERF1(1)   <---------ARR14(2)       <------NtERF2--------->ANAC46    --------->ANAC55(2)      ------>NtERF2 --------->ANAC58<-----------HVH21                                        <-------      <---------ATERF1(1)   <---------CCA1(2)        <---------At4g35610     <---------At4g35610     ----------->HVH21--------->MYB55(1)<---------ANAC55(2)                  --------->At4g35610----- =================bZIP_DOF  <---------MYB52(1)     <-----------GT1   <---------ALFIN1    ---------->ID1   tctcaaggcgacgtcgtttcacacccacccgtttcttctgtcaagtaagcattttagcttcttccattgccccaaattttgctgaaaatttgttcctttg  15960300      --------->At4g35610                                   <---------YAB1    <---------ZAT6    <--------P                                         <---------ZAT6     <---------MYB52(1)   <---------ANAC58                             <---------TOE2(3)        --------->TOE1(3)   <---------ANAC58         ------>ZmHOX2a(1) --------------->AGL15      --------->TOE2(3)  ---------   <-------GAMYB      <----------DOF2  <---------TOE1(3)    <---------ANAC55(1)        <---------At5g28300 ---DOF2      <---------GLK1(2)        <---------TOE2(3)    <---------ANAC46--------->MYB52(2)   <--- ---->ATHB12  --------->ARR11(3)    <----------DOF2  ----------->GT1   <---------TOE2(3)  --------->At5g28300   atttgggttgctcaaagattatgtcttttcctgatgggctttaggttactaagaatggtgttatgtgtgaatcaacgttagtgaaaaatcaccgtaaagc  15960400                           <---------HSFC1(2)                           <---------HSFB2a(1)              --------->GLK1(2)            --------->KAN4(1)           <---------KAN4(2)                                      <---------ANAC46           <-------       <---------HSFB2a(2) --------->HSFC1(2)                     <---------ANAC58        <----------    <----------DOF2        --------->HSFB2a(1)           <---------MYB46(3)              <<<<<<<<<MYB98 <-----------GT1 <----------DOF2                      --------->ARR11(3)        <---------TOE2(3) <-- ->DOF2--------->HSFB2a(2)<-----------ARR10         <---------TOE2(3)     --------->GLK1(2)  <------- -------DOF2<---------KAN4(1)                       <---------YAB1<---------ANAC58    <---------TOE2(3)   ttttaacttttggaacaatcttttggagaaacttctcattttgaatcagacattaagatttgttgatttcttggagaattttgatgtttatgttactttt  15960500  Previous    Next  AGI:  At5g39830.1    Description:  DEG8/DEGP8 (DEGP PROTEASE 8); peptidase/ serine-type peptidase/ trypsin. Identical to Protease Do-like 8, chloroplast precursor (DEGP8) [Arabidopsis Thaliana] (GB:Q9LU10); similar to DEGP1 (DEGP PROTEASE 1), serine-type peptidase [Arabidopsis thaliana] (TAIR:AT3G27925.1); similar to OSJNBa0072F16.5 [Oryza sativa (japonica cultivar-group)] (GB:CAD40980.2); similar to hypothetical protein OsI_015630 [Oryza sativa (indica cultivar-group)] (GB:EAY94397.1); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase S1C, HrtA/DegP2/Q/S; (InterPro:IPR001940); contains InterPro domain Pep Range:  from: 15960025    to: 15963055    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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