Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->YAB1                                                     <---------ICU4                                                    --------->ICU4                                                    <---------YAB1                                                  --------->YAB1                                                  <---------ICU4                                                 --------->ICU4                                                 <---------YAB1                                               <---------ICU4                                               --------->YAB1                                              <---------YAB1       <---------YAB1                                              --------->ICU4     <---------ZAT6                                            --------->YAB1      <---------YAB1                                            <--------HAHB4   <---------YAB1   --------->TOE1(3)                 --------->ARR11(3) --------->YAB1   --------->TOE2(3)                 <---------ARR14(2) <---------ICU4 --------DOF2                        <---------ARR11(3)<---------YAB1 ------ANAC58         --------->MYB52(2)   <---------YAB1 --------->ICU4 ------ANAC58       <---------MYB52(1)   ------>ZmHOX2a(1)<---------YAB1               <-----------TGA1 --->ID1        <---------At4g35610  --------->ARR14(2)--------->ICU4         --------->AtLEC2  <----   ctttcccttaaatttctcatctgttagttctcacttcaatatcctattattattattattattattagtattattcattcatgcatcatcgtcatcatct  15946000                                             <----------DOF2                               <---------TOE1(3)                               <---------TOE2(3)                                                   <-                               --------->MYB59                           <---------AtLEC2       -----                    <----------DOF2  ---------->DOF2            <----------DOF2           --------->TOE2(3) ------DOF2      <-----------GT1----------->GT1            <-----------GT1          <-----------GT1--   ttcgatttcacaaacgttttttcttttggtttttaggtaaaaagtctctttatctgcaaatttacactttcttctgcatgagtttttttcaacctagata  15946100                                ------>MYB46(1)<-----------TGA1       --------->ATHB12       --------->DREB2C(2)  --------->At4g35610                  <---------HSFC1(2)      <---------YAB1          --------->DEAR3(1)   <---------At4g35610                  --------->HSFB2a(1)      <-------TEIL    --------->ARR11(3)      --------->TGA1a                <---------At4g35610 <------------MYB.PH3(1)     --------->DEAR3(2)<-----------HVH21             <---------CCA1(2) ----------GT1        <---------ARR11(3)      --------->bZIP60(2)        <-----------HVH21 ---->YAB1         <-----------GT1       --------->MYB46(3)         <---------AHL20(2)  --------->HSFC1(2) ------->YAB1 --------->AHL20(2)------>MYB83  --------->O2          --------->AHL20(2)  <---------HSFB2a(1)   ataacagtttcattgaaaaaataacatcttcaccgacttaacaacgactcgtcagcaaaaactaatccatttatatgtcatctcttaagaaatttctcgt  15946200                                                                                    <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                             <---------DAG2                                        <---------YAB1                       <----------DOF2                     --------->GLK1(2)<---------ICU4                   --------->LBD16                    <---------GLK1(2)<---------YAB1                   <-----------RAV1(2)             <---------DAG2        --------->YAB1                 <---------At4g35610             <----------DOF2------>ZmHOX2a(2)                     --------->At4g35610          <-----------GT1  <---------At4g35610            <----------DOF2  <-------TEIL <-----------GT1   caattccattttttacttttcagaatttgatctcacatcatcatgctggttttgctctctctttcttcatctccaggtactttattttaatttccatttc  15946300                                                               ----------->GT1                                                           <---------AHL20(2)       --------->AHL20(2)                                                          <---------AHL20(2)        ----------->TBP                                                    --------->ANAC55(2)             <---------AHL20(2)                                                --------->CCA1(2)                 <----------DOF2              <-----------GT1                  <---------ARR14(2)                 --------------->AGL15          --------->AHL20(2)                   --------->ARR14(2)         <-----------GT1      --------->AHL20(2)                  --------->AHL20(2)---------->DOF2  <----------DOF2      <---------AHL20(2)           ----------->GT1  --------->ANAC46     <-----------GT1  <---------RVE1(1)       <---------YAB1  --------->YAB1  --------->AHL20(2) <---------DAG2        <-   tgtgatatttttttatatactatatatcattttagacgcgttaataaaaaatacgcgtaattaaaaggaaactttttaacttttctttaaatataaacac  15946400                 <---------MYB46(3)                *TSS       ----------->RAV1(1)            <-------TEIL --------->MYB46(3)                                                       ---            ------------>CBF --------->ANAC46             --------->HSFB2a(2)                   <----         ----------->GT1 --------->DEAR3(2)               <---------HSFB2a(2)        <---------WOX13(1)        <---------------AtSPL8     ---------->DOF2<-----------GT1--------->GLK1(2) --------->ATHB12 < --------ZAT6  <------------CBF ----------->RAV1(1)   --------->ZAT14             <---------YAB1-----   agtgttcgaagaggtacaattgttgaaaccgacacaacaaagactcgatttttatctgtactcgaagaatcagtagaagcgaagatgattgaattagaaa  15946500                                                                  --------->ANAC58 --------->HSFB2a(2)                                              --------->ANAC58 <---------HSFB2a(2)                                     <---------ANAC58                      ------ ------>GLK1(2)                                   <---------AHL20(2)                   <---------At4g35610 -----HSFB2a(1)                                  <---------AHL20(2)          <---------HSFB2a(2) ---------LBD16           ----------->GT1        --------->AHL20(2)----------->GT1  ---------->DOF2 ---->HSFB2a(1)   >>>>>>>>>TBF1    <-----------------AG  <---------ANAC58    --------->HSFB2a(2)   attctggaatcgaagatgaagaagaagttagtgaatcgccgaaattggtttttaaattcgcgtttcagacggaaactttcgagagattaagcagagaagg  15946600                                                                                      --------->DEAR3(1)                                                                                    <---------RAP2.3(1)                                                                                    ------>NtERF2                                                                                    <---------ERF1                                                                                    <---------DEAR4(2)                                                                                    <---------ATERF1(1)                                                                                   <---------RAP2.3(2)                                                                                   --------->DEAR3(1)                                                                                   <---------DEAR3(1)                                                                                   <---------ATERF1(2)                                                                                   <---------ANAC46                                                                                   <---------RAP2.3(3)                                                                                   --------->ATERF1(2)                                                                                  <---------At4g35610                                                                                  --------->At4g35610                                                                                  --------->DREB2C(1)                                                                                  <---------ABI4(1)                                                                                  --------->ATERF1(1)                                                                                  <------NtERF2                                                                                  --------->RAP2.3(1)                                                                                  --------->DEAR4(2)                                                                                 <---------ATERF1(1)                                                                                 ------>NtERF2                                                                                 <---------RAP2.6(1)                                                                                 <---------ERF1                                                                                 <---------RRTF1(1)                                                                                 <---------ORA47(2)                                                                                 <---------RAP2.3(1)                                                                                <---------RAP2.6(2)                                                                                <---------ATERF1(2)                                                                                <---------DREB2C(2)                                                                                <---------RAP2.3(2)                                                                                <---------DEAR3(1)                                                                                --------->DEAR3(1)                                                                                <---------RAP2.3(3)                                                                                <---------RRTF1(3)                        <---------ANAC46                                        <---------RRTF1(2)                  <---------WOX13(1)                                           --------->ATERF1(1)                --------->ATHB12                                              <---------RAP2.3(1)                <---------ICU4                                               --------->ANAC46               --------->ICU4                                                <---------RAP2.6(2)               <---------YAB1                                                <---------RAP2.3(2)-----          <---------ANAC58                                                  <---------At5g28300 -----          <---------ANAC58                                                  <---------LBD16 <--------       <---------MYB52(1)  --------->REM1(2)                       <---------MYB52(1)<------NtERF2---      <-------GAMYB <---------LBD16                               --------->LBD16<---------DEAR4(2)     ------>ZmHOX2a(2)  --------->ALFIN1                        <---------LBD16<---------ABI4(1)<----   --------->ARR11(3) <---------ANAC46                  <---------GLK1(2)  <-----------GT1<------ZmHOX2a(1)   <---------ARR11(3)<---------ANAC46 <---------ZAT14 <---------YAB1    <---------ICU4<---------ANAC46 ----->GT1<---------ANAC46--------->ALFIN1          <---------At4g35610--------->ICU4--------->ATERF1(1)   ttatagatcgttgagtgatgattgcggtgtggagagcgagagcagttttttgtcttctgattcttctccggtgatttttacggcggcggcgaggaaatac  15946700                                                 --------->DEAR3(1)                                                --------->ORA47(2)                                                <------NtERF2                                                --------->RAP2.3(1)                                               ------>NtERF2                                               <---------ATERF1(1)                                               <---------DEAR4(2)                                               <---------ERF1                                               <---------ORA47(2)                                               <---------RAP2.3(1)        ------>NtERF2                         <---------RAP2.3(3)        <---------DEAR3(2)                    <---------RAP2.3(2)       <---------At1g77200                    <---------RAP2.6(2)       <---------DEAR3(1)                     <---------DEAR3(1)     <-----------HVH21         ------>ZmHOX2a(1)--------->ATERF1(1)    --------->DEAR3(1)         <---------HSFB2a(2)   <----------DOF2 ---->ANAC55(2)                --------->HSFB2a(2)------>NtERF2 ---->ANAC46    <-----------ARR10          --------->DAG2        <---------YAB1 -GLK1(1)<------NtERF2  <----------DOF2   ---------->DOF2 <---------TOE2(3)       --------->ANAC58  < ------>ANAC46  <---------ARR11(3)       ---------->DOF2  <---------TOE1(3)       --------->ANAC58  - -----ANAC55(2) --------->ARR11(3)       --------->MYB52(1) <-------GAMYB     <------ZmHOX2a(1)    <-   gagacaccgtcggcgaaaaatctcacctttgtcctcgaaaacccaaaggcggcgacttttagggttgaagattgtttgaaggagaagcaagagaaaacag  15946800                                  ----------->GT1                                 --------->DAG2    <---------TOE2(3)           ---------->DOF2                         ----------->GT1    --------->MYB59          <------ZmHOX2a(1)                   <----------DOF2                    -    <---------TOE1(3)    <---------ANAC46                        ------>ZmHOX2a(1)   --------->ARR11(3) ---------ARR14(2)    --------->ANAC46                           --------------->AGL15            <-- -------->ARR14(2)   <---------At5g28300                         <---------------AGL15<---------RVE1(1) -----ZmHOX2a(1)     <---------LBD16           <------ZmHOX2a(1)--------->TOE2(3)    <---------GLK1(2)   aggatttaggttactctgtttttcacggcgaggataaagtaaaaacagaggattactctgtttcatcctttaagaagaaaaaaatcagatttttaacaga  15946900  Previous    Next  AGI:  At5g39785.1    Description:  structural constituent of ribosome. similar to structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G69610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14984.1); contains InterPro domain Ribosomal protein L34e; (InterPro:IPR008195); contains InterPro domain Protein of unknown function DUF1666 (InterPro:IPR012870) Range:  from: 15946416    to: 15949504    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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