Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <----------DOF2                                            <---------ARR14(2)          ------>ZmHOX2a(2)                         <-----------RAV1(1)       --------->ANAC46        <---------ARR11(3)                   <---------TOE2(3)        <---------ARR11(3)  ---------->DOF2                            <---------TOE1(3)        --------->ARR11(3) -------->ANAC46                            <---------DOF5.7(2)       --------->ARR14(2) -------->ANAC58                         --------->TOE2(3)            --------->GLK1(2)    ------>ZmHOX2a(2) -------->ANAC58                      <---------WRKY18(1)         ================================HOX2a_HOX2a ---DOF2--------->ARR11(3)           ----------->HVH21 <---------REM1(1) <----------DOF2 --------->ARR11(3) --------AGL15          --------->ATHB12 --------->TOE1(3)        <------ZmHOX2a(1)      <---------ARR11(3)   acaagaaagtgatctttctcattccttcatttgaaaggtttgaccttaacgtttttgttgtagtcgaaggagtatctttcacaacattgctgatcttaga  15928200                  --------->YAB1                 <---------YAB1               <-----------GT1                                <---------YAB1                   <-----            <---------ICU4                                 <---------MYB52(1)                  <-----            --------->ATHB51                              <----------DOF2                 <----------            <--------HAHB4          <----------DOF2      <----------DOF2               <---------ICU4           --------->ICU4         ---------->ID1  <---------ANAC58               ----------->RAV1(1)<           <---------YAB1        <-----------GT1  <---------ANAC46             ----------------------     <-----------GT1           <---------AHL20(2) <---------ANAC58  --------->ANAC46  --------->AHL20(2)   acaaatgtaacccattattaccataagacttattttttctttttcagttttgacttgtgcctttatgtttaagacactagtagccacatttattacgctt  15928300                                                       ------>MYB83                                                       --------->MYB52(1)                                                       ------>MYB46(1)    --------->LBD16                                  <---------MYB59   --------->ANAC46                                  <---------MYB111(1)  <---------LBD16  <---------ALFIN1                  <---------MYB52(2)                             - <---------At5g28300      <----------DOF2            <---------MYB46(2)                            -- ----DAG2        --------->ANAC58                    --------->AtMYB61                         <----- -----DOF2       --------->ANAC46                    <---------MYB111(2)                       ------ -GT1      --------->AHL20(2)     --------->PCF2    --------->ANAC46              <---------MYB46(3)< -----------GT1  --------->ANAC58 <------ZmHOX2a(2)------->TEIL        --------->YAB1      --------->ATHB12 ->TaNAC69(2)<-----------GT1     <---------ARR14(2)-------->P----------->GT1   --------->TOE2(3)   --   tttcaccgcaaaatttaacacgcactctctttgtcgatcccacaaactccatctacctaaccatggttaaaaatcatcaaaccttggttcccttgattaa  15928400                                                                              <---------YAB1                                                                           <---------ARR11(3)                                                                           --------->AHL20(2) -------->ARR11(3)                                                         <---------AHL20(1)<------- ------->CCA1(1)                 <---------AHL20(2)               <---------DAG2       <---------AHL20(2) ----AHL20(2)                    --------->AHL20(2)               ------>ZmHOX2a(1)  <----------DOF2- --->AHL20(2)               <---------AHL20(2)                    <----------DOF2 <-----------GT1 --- ---------ARR11(3)     <---------YAB1     --------->AHL20(2)   ---------->ID1 <---------AHL20(2)  <-- ------->RVE1(1)   <----------DOF2     --------->YAB1    <---------YAB1    --------->AHL20(1)<-------   aatatccctaaatccaagtctctttattatttcatttaaaatcataaatttagtttaatacaattgtcctttttcaaaatattatttctttatttgcttc  15928500                                                                                                <----                                                                                                -----   ------->GAMYB                                                                               ------  --------->MYB46(3)                                                                           ------ --ANAC58              <------------------------ANAC81        --------->YAB1               --------->AHL20(2) ---------->RAV1(1) <---------CCA1(2)                         --------->AHL20(2)  <---------ANAC55(2) ------>At4g35610 --------->YAB1          ------>ZmHOX2a(1)  <---------ATHB12     ----------->GT1 -------At4g35610<---------YAB1        ------>ZmHOX2a(1) ------------>CBF         --------->ANAC55(2) --ANAC58      --------->YAB1    <----------DOF2       <-----------GT1    ----------->GT1  <---------AHL20(2)   agcaacagtcgtcatagtcatcatatcattttcttcttttcctcctctaaacgaatattaccaataaaaaatcaagtggaaaatatgtaatattaaaaaa  15928600      --------->At4g35610    --------->MYB46(3)  ----------->RAV1(1)               <----------DOF2 -----ARR11(3)                    <---------YAB1 ---->ARR11(3)                --------->ANAC55(2)  <<<<<<<<<TBF1      <---------GLK1(2) --->CCA1(1)                <-----------GT1  <<<<<<<<<TBF1  <-----------GT1                      ---- --->RVE1(1)           <---------DAG2       *TSS<<<<<<<<<TBF1      <-----------GT1         --------->ARR14(2)   tctccaacagcttaagaagttagaacctttttacttatctttatttcttcttcttcttcatttttctattcacattctctgaaactcataccatattttc  15928700                                                    <---------AHL20(2)                                                   --------->YAB1                                             <---------MYB46(3)                                             ----------->GT1                                         <---------ICU4                                         --------->ATHB12                  --------->CCA1(2)                                         --------->ATHB51                 --------->ARR14(2)                                         -------->ATHB1                <---------WOX13(1)                                        <---------AHL20(2)           --------->YAB1       --------->YAB1 --------->ARR11(3)                     <---------ATHB51            <---------YAB1     --------->YAB1 <---------ARR11(3)                     --------->ICU4 <---------TOE2(3)  <---------ARR14(2) ------>DOF2             <----------DOF2--------->AHL20(2)          --------->ICU4  ------>ZmHOX2a(1)   aaagctcttaacccaaaaaccctaagtcttttttttcttcaaattattggttatattaatgttttaagctatgatggatatgactcctacaataacaaca  15928800                                                        ------>MYB46(1)                                                        ------>MYB83                                                        --------->MYB52(1)                                                        -------->P                                                     ------>ZmHOX2a(2)                                               <---------LBD16                                            ------>NtERF2                                           <---------ETT(1)--------->LBD16                                           ----------->HVH21                                           --------->DEAR3(1)                                       <---------HSFC1(2)--------->DEAR3(2)                                       --------->HSFB2a(1)--------->DEAR3(1)                    -----              ------>ZmHOX2a(1)     --------->LBD16 <------ZmHOX2a(2)                           -----         -------->P                --------->ANAC46--------->ARR14(2)                           -----         ------>MYB83           --------->ARR14(2) <---------ARR14(2)               ------->GAMYB   <         ------>MYB46(1)        --------->GLK1(2)--------->LBD16                   --------->ANAC58 -       --------->AtMYB61        <---------ARR14(2) <-----------ARR10               --------->ANAC58 <       --------->MYB46(3) ------->TEIL --------->HSFC1(2)--------->MYB46(3)      --------->MYB52(1)-- --------->MYB46(3)    --------->ANAC46<---------HSFB2a(1)------->GAMYB    <----------DOF2      -----   acaacaacaccaactcctaaatcacccgaacccgaatccgaaactccgacccggatccaaccggcgaaacccatttcctttagcaacggcatcatcaaac  15928900                                                                <----------DOF2                                                              <------NtERF2           --------->AtMYB61                                 <---------RAP2.3(1)           <---------ALFIN1                                  ------>NtERF2        --------->DEAR3(1)                                  --------->DEAR3(1)        --------->AtMYB61                                   <---------DEAR3(1)                   <---        <---------ALFIN1                                    <---------ANAC46                 <------NtERF2       --------->MYB46(3)                                   <---------RAP2.6(2)              ------>NtERF2     --------->AtMYB61                                      <---------RAP2.3(2)            <---------RRTF1(2)     <---------ALFIN1                                      <------NtERF2                   <---------ANAC46     --------->DEAR3(1)                                    --------->ATERF1(1)             <---------RAP2.3(2)    --------->MYB46(3)                                     ------>NtERF2                   <---------DEAR3(1)  --------->AtMYB61                                        --------->RAP2.3(1)         <-------GAMYB  <---------ALFIN1                                         --------->DEAR4(2)         <---------MYB46(3)  --------->DEAR3(1)                                      <---------DEAR4(2)          <---------DEAR3(2) --------->MYB46(3)       <----------DOF2                 <---------RAP2.3(1)      ------------>AtMYB77 ---->ANAC58    ------>MYB83                              <---------ATERF1(1)     --------->ETT(2) -->GAMYB --------->MYB46(3)                             <---------DEAR3(1)       <---------ETT(2) ---->ANAC58    ------>MYB46(1)                         ------->MYC3             <---------HSFB2a(2) ---------ATERF1(1)     ------>ZmHOX2a(1)               <-------MYC3        --------->ANAC58--------- ----->NtERF2 --------->AtMYB61                        --------->ANAC46     --------->ANAC58<-------- xxxxxxxxxxxxxxxxsmallRNA(i)                           <---------O2     <-----------HVH21  <---------RAP2.6(2) ------->DEAR3(1)  ------>ZmHOX2a(1)                   --------->O2<---------AtMYB61 <---------DEAR3(1) ---->ANAC46  <---------ALFIN1                    <--------------OsCBT <---------MYB46(3) <---------LBD16   gccaccaccaccaccaccatcctctcctctttacttacaaagaatgtctcaaaaaccacgcggcggctttaggtggtcacgctctcgacggttgcggcga  15929000                                                                                    ----------->HVH21                                                                                   --------->LBD16                                                                                ------>NtERF2                                                                  <------NtERF2--------->DEAR3(1)                                                                 ------>NtERF2 --------->DREB2C(2)                                                              ------>NtERF2    <---------ALFIN1      ------>NtERF2                                           <---------ATERF1(1) <---------ANAC46      <---------ATERF1(1)                                  <---------At4g35610 ------->GAMYB      <---------RAP2.6(3)                            <---------ANAC58         --------->MYB46(3)     <---------ANAC58        --------->ARR14(2)      <---------ANAC58         --------->DEAR3(2)     <---------ANAC58    ------>ZmHOX2a(1)           <---------ANAC46       <---------ALFIN1 ------ARR14(2)   --------->WOX13(1)             --------->At4g35610 <---------MYB52(1)   --------->LBD16 >LBD16--------->ATERF1(1)   <---------ARR14(2)  <---------At4g35610--------->At5g28300 ------>ZmHOX2a(2) -RAP2.3(1)   <---------ETT(2)<------ZmHOX2a(2) --------->ALFIN1<---------ALFIN1--------->ABI4(1)   attcatgccgtctccgtcgtcaatctcctccgatccaacttctctcaaatgtgctgcttgtggctgccaccgtaatttccaccgccgtgatccagataac  15929100  Previous    Next  AGI:  At5g39760.1    Description:  ATHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23); DNA binding / transcription factor. similar to ATHB34 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 34), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G28920.1); similar to Homeobox domain, ZF-HD class; ZF-HD homeobox protein Cys/His-rich dimerisation region; Homeodomain-like [Medicago truncatula] (GB:ABN05735.1); contains InterPro domain Homeobox domain, ZF-HD class (InterPro:IPR006455); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region (InterPro:IPR006456); contains InterPro domain Homeodomain-related; (InterPro:IPR012287) Range:  from: 15928644    to: 15930058    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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