Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------ANAC46                                                       <---------ANAC58                                                       <---------ANAC58                                                  --------->At4g35610             -------->ATHB1               --------->GLK1(2)                                --------->ANAC55(2)             --------->ATHB51            --------->ARR11(3)     <------NtERF2    --------->REM1(2)            <---------YAB1               <---------GLK1(2)    <---------ANAC58<---------ANAC46        ----------->GT1                  <---------ARR11(3)   <---------ANAC58<---------ANAC58      <---------ANAC46                  <---------RVE1(1)     <---------ANAC46<---------ANAC58      - ----->ARR11(3)   <---------ZAT6 <----------DOF2  <---------At4g35610 <---------AHL20(2)   <---------ANAC55(2)   atcatgtggattgtattattgtgttatacaagagtctttaagagattttggcatcttacttgtggcgtctattgaattaagcgtgtatggattaagtgac  15920100                    ------>MYB83                    ------>MYB46(1)                      ---------->DOF2                   --------->ORA47(1)                ----------->GT1                  --------->DEAR3(1)                 <---------MYB46(3)                  --------->MYB46(3)                <---------ATHB12                  <---------MYB59               ------>ZmHOX2a(1)                  <---------MYB111(1)          --------->TOE2(3)                              -------                  <---------MYB46(2)        <---------ARR14(2)                                <------              <---------SPL7                --------->ARR14(2)                          <---------ANAC55(2)            <---------------AtSPL3          <---------ARR11(3)                          ----------->GT1            <---------------AtSPL8          --------->ARR11(3)             --------->ATHB12<---------       --------->GLK1(2)                   --------->RVE1(1)            --------->YAB1  --------->ANAC55(2) --------->DOF2  --------->DEAR3(2)        --------->CCA1(1)    --------->YAB1     --------->DAG2<---   tgaaaagagaatttgtagtaccgaccatgggataagggttttgaaatatcctcaatggttaaagaagcatactataaacattggaaaggtatgtaacatc  15920200                         <---------HSFB2a(2)                       <-------TEIL                      --------->ARR11(3)                   <---------TOE1(3)          --------->ANAC46          --------->ANAC58 <---------MYB46(3)--------->DAG2                                                --------->ANAC58 -->ARR11(3)       <---------TOE2(3)         --------->YAB1                <------ZmHOX2a(1) ---ARR11(3)     --------->CCA1(2)     ----------->GT1                ----------->HVH21 ----------->GT1 --GT1    --------->ANAC58             <---------ANAC55(2)   --------->ANAC58    --------->ANAC58 -------DOF2---------->DOF2            --------->ANAC55(2)   --------->ANAC58  --------->CCA1(2)   ttttggttacacaagaaagataaggttcttgaagacttggtatgtaataagaagttaagaaccaagtaagaagtgaaggagagacgaaaatggagaaatt  15920300                <---------AHL20(2)               --------->AHL20(2)        --------->AtLEC2                      <-----------GT1      <---------ANAC58                      <-----------GT1     ----------->GT1      <---------ANAC58      --------->ANAC55(2)               ---------->DOF2            ---------->DOF2   --------->ZAT14     <----------DOF2   <---------ICU4    ----------->GT1          <------ZmHOX2a(1)   <---------ZAT14 <-----------GT1 <-----------GT1     ---------->DOF2    <---------ANAC55(2)       -   cacagagtacttgcaaattttataccttttacataatttacaaatattacactctcccaaagagtaaagaaaaattaagtgagagaggacttaaaggccc  15920400                                   --------->ARR14(2)                                   <---------ARR14(2)                                   ------>MYB46(1)                                   ------>MYB83                                 <---------MYB52(1)                                   --------->GLK1(2)                           <-------GAMYB                                  --------->WOX13(1)                           <---------At4g35610                                ------------>CBF      <---------AHL20(2)      <---------MYB46(3)                                --------->MYB46(3)   --------->AHL20(2)    <-----------HVH21           <---------MYB52(1) <-----------GT1        --------->ICU4     <---------ANAC58   ---------->DOF2      <---------AHL20(2)   <---------MYB52(1)         <---------ANAC58 -------->YAB1         --------->AHL20(2)   <-------GAMYB      ----------->RAV1(1)--------->ATHB12   aaatataaagcccattaggcctatatttaatataaccaatctggaccgttgaatatttattaagcccacataaatcgtgtccgttgattagaagagccca  15920500                                            <----------DOF2                                         --------->ARR11(3)                                    ------                                         <---------ARR11(3)                                    ------                                        <------MYB46(1)                            ==================                                        <------MYB83                               ==================                                       --------->MYB59                            --------->ANAC58                                    <----------DOF2                               --------->ANAC46                             --------->ARR11(3)                   <-----------HVH21<------ZmHOX2a(1)                        *TSS <---------ARR11(3)  ------>NtERF2<----------DOF2     --------->ANAC58                ---------->ID1 ------>ZmHOX2a(2) <---------RAP2.3(1)       <---------ICU4  --------->YAB1   agagaactctagggttttgtcttataagcttgatctcgcattaggtctttgcgcctcttgccatcttttgtcactcatcttcacaggaaacaatggtaag  15920600                   --------->ANAC46                 <-----------GT1          ------>ZmHOX2a(2)         --------->GLK1(1)         <---------GLK1(1)         <------ZmHOX2a(2)        <---------ARR11(3)        --------->ARR11(3)                                               <---------ANAC46        <---------AGP1                                   --------->ARR11(3)       <---------ARR11(3) --->ANAC58     --------->ZAT14                          <---------GLK1(2)        --------->ARR11(3) --->ANAC58    <----------DOF2                 <-----------RAV1(2)  <---------ANAC58 ================HOX2a_HOX2a                  ------>ZmHOX2a(1)     <---------ANAC58  --------->At4g35610 ===============HOX2a_HOX2a             <-----------GT1  <---------ARR14(2)      <---------GLK1(1)  <   ccctagctaagatctctctttactccatagtttcttcttgattttctcctcaggcttcagattttgggtttcgtttcatgtagaaatcttctgcatttca  15920700                                                       <---------ARR11(3)          --------->YAB1                          <---------ANAC46         <---------YAB1                          <-------TEIL                                      --         <---------TOE1(3)                    <---------At4g35610                       <---------ANAC46         <---------TOE2(3)                    --------->At4g35610                       <---------ANAC58   <---------------AGL15     ------->TEIL     <---------ZAT2                            <---------ANAC58 ---------YAB1     <---------GLK1(2)          --------->ZAT2 <-----------GT1<---------MYB46(3) ------   gtttgatagttatggtaacgagaatttcatgaacatatggttctattcagcttcgtagatgtttttcttcatgggttttggttacgacttgcttgagaat  15920800                                                                         <---------TOE1(3)                                                                   <---------ANAC58                                                                   <---------ANAC46         <---------ARR14(2)                               <------ZmHOX2a(2)                        <-         --------->ARR14(2)                               <---------ZAT14<---------TOE2(3)<---------DAG2 -------->DOF2                                      <----------DOF2<---------ANAC58       <----------DOF2 --->GLK1(2)                            ---------->DOF2  --------->ARR11(3)         <----------DOF2<-   cgaaagtagcatatttgtgttttttgttcttgggatttagaataaagtttaagactttagatcactgatgcgtttaaagtttgagactttagctttttgt  15920900                                                 <----------DOF2        <----------DOF2                       <---------AHL20(2)    <---------MYB52(1)        ------>ZmHOX2a(2)                       --------->AHL20(2)   <-------GAMYB             <------ZmHOX2a(2)              <-----------RAV1(1)          --------->MYB52(2)        --------->ARR11(3)          --------->ZAT18                  <---------MYB46(3)        <---------ARR11(3)         <-----------HVH21                <---------TOE1(2)          --------->AGP1        --------->bZIP60(1)              <---------MYB52(1)          <---------AGP1                 <       <---------TOE2(3)         <---------ARR11(3)                 <---------CCA1(2)               <   <-------GAMYB   <---------ANAC58    <---------ANAC58            ----------->ARR10              <--  <---------MYB46(3)----------->GT1    <---------ANAC58        ----------->GT1                    <-- <---------AtMYB61 <---------ANAC46 <----------DOF2           <---------YAB1                      <-- --------ANAC46    <---------ANAC58------>ZmHOX2a(2)          <---------TOE2(3)               <------ ----------RAV1(1)<-------TEIL   --------->ARR11(3)     --------->AHL20(2)            <----------DOF2   tctgtggttgaggtcactggtgcgtttaaatgtatgatctttcgttcgttactttgaaaaaaatatggttagatctttagatttattcctttgtatatgt  15921000  Previous    Next  AGI:  At5g39730.1    Description:  avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related. similar to AIG2L (AVIRULENCE INDUCED GENE 2 LIKE PROTEIN) [Arabidopsis thaliana] (TAIR:AT5G39720.1); similar to avirulence-responsive protein-related protein [Brassica rapa] (GB:ABV89638.1); contains InterPro domain AIG2-like (InterPro:IPR009288) Range:  from: 15918907    to: 15920098    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g39740.1    Description:  60S ribosomal protein L5 (RPL5B). Identical to 60S ribosomal protein L5-2 (RPL5B) [Arabidopsis Thaliana] (GB:P49227;GB:Q41921); similar to ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G25520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46314.1); contains InterPro domain Ribosomal protein L5, eukaryotic; (InterPro:IPR005485); contains InterPro domain Ribosomal protein L18/L5; (InterPro:IPR005484) Range:  from: 15920524    to: 15922692    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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