Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------ARR11(3)                            --------->ARR11(3)                          <---------YAB1              --------->YAB1                        <---------ICU4               <---------YAB1        --------->DAG2                        --------->YAB1       --------->CCA1(2)         --------->AHL20(2)                 <-----------ARR10          <---------ARR14(2)     <------ZmHOX2a(1) <---------TOE1(3)      <----------DOF2  <---------ATHB12     --------->ARR14(2) --------->TOE1(2)     <---------TOE2(3)   <-----------GT1     --------->ICU4  <---------AtLEC2    ---------->DOF2---------->DOF2  --------->AHL20(2)   ttttttttctttctctccaaatctaatcatgatattgttttccatggatatggctattatagaaagctaggaattaaaaagtgtttcaaggttttaaata  15895500                                                                                           <---------AHL20(2)                                                                    <---------AHL20(2)     --------->ATHB12                                                                 --------->YAB1           --------->AHL20(2)                                                                <---------AHL20(2)        <---------AHL20(2)                                                               --------->AHL20(2)         <---------AHL20(1)                                                            --------->AHL20(2)        --------->AHL20(2)                 ---------->DOF2                            <---------AHL20(2)        <---------AHL20(1)             --------->ZAT6                    --------->YAB1  <---------AHL20(2)     <---------AHL20(2)           <-----------GT1         --------->HSFB2a(2)     --------->ICU4    ----------->GT1        --------->MYB52(2)       <---------At4g35610   --------->At5g28300  <---------MYB46(3)        <---------MYB46(3)       --------->At4g35610  ----------->GT1    --------->ALFIN1 --------->AHL20(1)   tgttttttgtttgttactctaaagtttgttttttcttctgaaatttcatttataaacagtaattttttaataaatgtgtgggtaacaaaaaatttattga  15895600                                                                       --------->AHL20(2)                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)                                                               <---------AHL20(2)               -----                                                              --------->AHL20(2)                -----                                                      <---------ICU4   <---------AHL20(2)      ------                                                  <---------ATHB12--------->AHL20(2)          -------                                                 -------->P --------->TOE2(3)              --------->AHL20(2)                                                <-----------GT1--------->AHL20(2)         --------->AHL20(2)                             ----------->GT1    --------->WOX13(1)<---------AHL20(2)  --------->AHL20(2)                  ----------->GT1        <----------DOF2 <-----------GT1          <----------DOF2----   catagttagaattagaaaacatgtaaattagaagttaaatggcctttaatcaaccatttttacattaatttaaaaaaattcagacttttaaaataaaaaa  15895700                                                                                      --------->ANAC58                                                                                     ----------------                     ----------->GT1   --------->MYB46(3)                           --------->CCA1(2)                   ---------->DOF2  --------->WRKY38(1)                         --------->DAG2        ---------->DOF2             ----------->HVH21              ---------->DOF2 <----------ID1 ------>GT1    ----------->GT1    --------->At4g35610     ----------->GT1      ---------->DOF2------- ------------------->ANAC81      --------->ALFIN1        ----------->GT1 --------->ANAC58     <------ --->DAG2     --------->DAG2  --------->DAG2           ---------->DOF2   --------->ANAC58 ---------->DOF2 --->DOF2    ---------->DOF2 ---------->DOF2       <---------WOX13(1)  ---------->DOF2--------->ANAC58 ------->GT1------------------------>ANAC81----------->HVH21    --------->AHL20(2) ------------------   gttaaaaatgaaaagaaaagtaaaagtaaaaaaaagtgctgaccactgaccagattgaaaaggaaaataaaaagaaagccaaaaagagacgaaaaagaga  15895800                                                         --------->ANAC55(2)                                                         <---------ANAC58                                                         --------->O2                                                         <---------ANAC55(2)                                                         <---------ANAC46                                                         <---------O2                                                         --------->bZIP60(1)                                                         <---------TGA1a                                                         <---------bZIP60(1)                                                         <---------bZIP60(2)                                                         --------->TGA1a                                                        ----------->STF1                                                        ----------->bZIP910(1)                                                       <---------TGA2(2)                                                      ----------->TGA1                                                      ----------->HVH21                                                    <---------At4g35610                                                    ----------->bZIP910(2)                                                    --------->At4g35610                                                ------->MYC3                                                <-------MYC2                                                ------->MYC2                                                <-------MYC3                                               --------->TGA1a                                               --------->O2                                               ====================bZIP_bZIP                                               <---------ANAC55(2)                                               <---------ANAC58                                               <---------O2                                               <---------TGA1a        --------->ZAT18                        <---------ANAC58    --------->DAG2                             <---------ANAC46   ---------->DOF2                             --------->ANAC55(2)                                  < -------->ANAC81                            ------>ZmHOX2a(1)                          ------------>CBF ---->GT1                               <---------ARR14(2)                         <---------------AtSPL8 ----ID1<---------ZAT18                 --------->GLK1(2)<---------ANAC58       --------->DAG2     <- ------>ANAC81       --------->YAB1     --------->ARR14(2) --------->ALFIN1 --------->YAB1         --   aaaaaaaaagtccacaaaaacaaaaataaacttgtggctaagaatcctcacgtgtgatgacgtggcactctgggcgaatcaaaaggttgtacaattcgaa  15895900                            --------->ARR11(3)                            <---------ARR11(3)                       ----------->GT1                    <---------ARR14(2)              ----------->GT1              --------->ANAC58              --------->ANAC58                                                    --------->HSFB2a(2)             --------->DAG2*TSS    <-----------GT1                                <---------HSFB2a(2)            ---------->DOF2<---------CCA1(2)      ---------->DOF2              --------->GLK1(2) ------ZmHOX2a(2)   <---------ARR11(3)         --------->ANAC58             <---------------AGL15 --------ARR11(3)   --------->ARR14(2)         --------->ANAC58         <---------ATHB12 ------->ARR11(3)   --------->GLK1(2) <----------DOF2      ---------->DOF2<-----------GT1--------->YAB1   agatcacaaacccaaaaagcaaaatctgtaaatcttttttctttctctctcgcaaagacaaaaaagcattcccaattaacaaatctagaaatcaaaactc  15896000               --------->ANAC58               --------->ANAC58               --------->ANAC46     --------->MYB52(1)                                                                     <--------    ------->GAMYB                                                                           <--------    --------->AtMYB61                                                                 <-----------GT1    <---------ALFIN1                                        <----------DOF2           --------->ARR14(2)   <---------MYB52(2)                           --------->YAB1  <-----------GT1   --------->DAG2  <--   <---------MYB55(2)                          --------->AHL20(2)   ------>ZmHOX2a(1) <---------ARR14(2)   --------->MYB46(3)               <----------DOF2         <---------DAG2       ---------->DOF2  <--   agacaaccaccgataacaagacagtcgtttctctctctcttttaaacaaataaaaattggaacttttttcctctgtcttctcaaaaagtttccgcttttt  15896100                                                                 --------->ARR11(3)                                     --------->YAB1              <---------ARR11(3)                                     <---------ICU4    --------->LBD16                                     --------->ATHB12 --------->TOE1(2)                                     <--------HAHB4  <---------LBD16                              <--                                     -------->ATHB1--------->ARR14(2)                             <-- -DAG2                  ----------->GT1   <---------YAB1     ---------->DOF2                  ------- --DOF2    ---------->DOF2   ---------->DOF2     ----------->HVH21  <----------DOF2           <------ -------ANAC58     ---------->DOF2  --------->ICU4 <---------ARR14(2)                <----------DOF2 -------ANAC58 ---------->DOF2      <---------ATHB12 ------>ZmHOX2a(2)   ---------->DOF2 ----------->RAV1(2)   gctcgctggagaagaaagaaagaaagaagtgaaaaggaatcattaccatggctgatccggcgattaagctctttggaaagacgattcctttacctgagct  15896200                                                                                 <---------DEAR3(1)                                                                              <---------ATERF1(2)                                                                              --------->ATERF1(2)                                                                       <---------ANAC58                                                                 --------->YAB1--------->LBD16                                                            <-------GAMYB     --------->TOE1(2)                                                           <------MYB83<---------ANAC58                                                           <------MYB46(1)   <---------LBD16XXXXXXXXX                                       ------->GAMYB      --------->MYB59    --------->DEAR3(2)                                       --------->ANAC46 <---------MYB52(1)  ------->TEIL  --------->ICU4                                    <-----------GT1   ------>ZmHOX2a(1)<---------ANAC46 --------->YAB1   <---------MYB46(3)         <---------ARR14(2)    ----------------->AGL1<---------ZAT14 <---------YAB1 ----MYB83                    --------->ARR14(2)  --------->GLK1(2)   <-------TEIL  --------->ICU4 ----MYB46(1)                 <---------GLK1(2)  <---------GLK1(2)  --------->ARR14(2) --------->ICU4 -->ZAT2                    --------->LBD16     --------->At4g35610 <---------GLK1(2)--------->YAB1-- ---ZAT2     <<<<<<<<<TBF1<---------LBD16       <---------At4g35610 <---------ARR14(2) <---------YAB1   tggtgttgttgattcttcttctagctataccggatttttaaccgaaactcagattcctgttcggttatcagattcgtgtaccggcgatgatgatgatgaa  15896300            --------->LBD16          <---------LBD16                                                        --------->MYB52(2)          <-----------------AGL1                     <---------ANAC46          <--------P          ----------------->AGL1                <---------MYB46(3)           ----------->GT1        <---------ARR14(2)                     <---------AtMYB61            --------->DAG2      <---------MYB46(3)                  <------MYB46(1)                   <---------TOE2(3)  <---------MYB46(3)                      <------MYB83 <------ZmHOX2a(1)  ---------->DOF2        ---- XXXXXXXXXXX>MIR774B               --------->ICU4 --------->ALFIN1   ----------->GT1      --------->HSFB2a(2) ------->CCA1(2)   <------ZmHOX2a(1)  <-----------RAV1(1)           ----------->GT1       <---------HSFB2a(2)   gagatgggtgattccggtttaggacgagaagaaggtgatgatgttggtgatggtggaggagagagcgagactgataaaaaggttagttttttttggaact  15896400  Previous    Next  AGI:  At5g39660.1    Description:  CDF2 (CYCLING DOF FACTOR 2); DNA binding / protein binding / transcription factor. Identical to Dof zinc finger protein DOF5.2 (DOF5.2) [Arabidopsis Thaliana] (GB:Q93ZL5;GB:Q9FK95); similar to CDF3 (CYCLING DOF FACTOR 3), DNA binding / protein binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G47500.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60326.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 15895927    to: 15898251    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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