Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------At4g35610                --------->At4g35610         <---------TOE2(3)         ------>ZmHOX2a(2)                 ---------->DOF2        <------ZmHOX2a(2)                 <---------AHL20(2)       <---------ARR11(3)                 --------->AHL20(2)       --------->ARR11(3)             --------->ICU4       --------->ARR14(2)           --------->YAB1                                                  -       <---------ARR14(2)          --------->AHL20(2)                                          ------   ---------->DOF2             --------->AHL20(2)     <---------STY1(2)                       <------ ->GLK1(2)   <------ZmHOX2a(2) <---------AHL20(2)     --------->STY1(2)                       -------   atcggaaaagatcggatcaactgataagaacatataaataaaaattaaagtttattagctagtttttttttttttttttcactgatgaacaaaaaccgtg  15892000                                                                                             --------                                                                                             <-------                                                                                             <-------                                                              --------->ARR14(2)             --------                                                     ---------->DOF2                      --------->ANAC58                                                  --------------->AGL15                   --------->ANAC58     --------->AHL20(2)                           ===================================================     --------->YAB1                               <---------------AGL15                <---------ATHB12    <---------ATHB12                             <---------ANAC58              <---------AHL20(2) -------->MYB46(3)                               <---------ANAC46             <---------AHL20(1) --->ALFIN1                                      <---------ANAC58             <---------AHL20(2) ---- ---LBD16  ----------->GT1             --------->ANAC58       <---------ARR14(2)    <---------AHL20(2) -->LBD16 <-------TEIL                 --------->ANAC58     ----------->ARR10 --------->AHL20(2) <---   gaaccaatgaaattcgtataaatgggcttcataagtggcccaagccttgttccttgaaagggcagttctgccatagctaattttttttaatcaagcccaa  15892100          --------->LBD16      ------------------>SPL14 --------->AGL3                                 --------->DAG2 ----------AGL2                                ---------->DOF2 ----------AGL3                      --------->ARR14(2) --------->AGL2                      <---------ARR14(2)                            --------->ICU4 ==========MADS_MADS       <----------DOF2  --------->LBD16                   --------->ANAC55(2) ----->ARR14(2)       <---------GLK1(1)   <---------LBD16<----------ID1<---------CCA1(2) ------ARR14(2)       --------->GLK1(1)  --------->MYB52(1)      <-------TEIL <---------ANAC55(2)   atatggtttgtccgtaaatgagggatttccttttacccaaatccaccggaaaagtattagagacaaatacatcatctcttaagtaatgtttcatttgata  15892200                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                           ------->MYC3                                                                                           <-------MYC2                                                                                           ------->MYC2                                                                                           <-------MYC3                                                                                           ------->MYC4                                                                                           <-------MYC4                                                                                           ------->PIF5                                                                                           <-------PIF5                                                                                          <---------PIF3(3)                                                                                          >>>>>>>>>>HY5           --------->LBD16                                                                --------->TGA1a          <---------HSFB2a(2)                                                             --------->PIF3(3)          --------->HSFB2a(2)                                                             --------->ANAC46          <---------ANAC46                                                                --------->O2         <---------LBD16                                                                  <---------O2      <---------ANAC58               <---------ANAC46       --------->ANAC58              <---------TGA1a      <---------ANAC58               <---------ANAC58       --------->ANAC58            <---------ALFIN1    --------->ARR11(3)           <-------MYC3             ---------->DOF2          <---------MYB46(3) --------->YAB1                  ------->MYC3             ==========================================bZIP_DOF <---------ICU4      <----------DOF2 <---------ANAC58 ------->TEIL    --------->ZAT6  <--------------   gaataataacttgcggaaattttctttaagaaacacatggcttgggccaattcatggacttcaagcccatttacactaatttcatttgttccacgtggct  15892300                                                                                ------>NtERF2                                                                                <------NtERF2                                                                                --------->LBD16                                                                               --------->RAP2.6(2)                                                                            ------->GAMYB                                                                            --------->DEAR3(1)                                                                            --------->ANAC46                                                                           --------->MYB46(3)                                                                           <------------AtMYB77                                                  <---------At4g35610      --------->DEAR3(2)                                                  --------->At4g35610     <---------At5g28300                                                 <---------TOE1(1)       --------->ARR14(2)                                                 <---------TOE2(1)       --------->MYB52(1)                                                --------->SPL7           <---------ARR14(2)                                              <-----------HVH21         --------->MYB46(3)  <---------YAB1                              <---------SPL7      ------->GAMYB--------->DEAR3(1) ----ANAC58                <---------DAG2    <---------ETT(2)    <------------AtMYB77 ----ANAC58      --------->GLK1(1)           --------->ETT(2)    --------->MYB46(3)          -------- ----ANAC46   --------->ANAC58             <-----------HVH21    <---------At5g28300          <------- --PIF3(2)    --------->ANAC58   ----------->RAV1(1)   ------->TEIL ------------>CBF  ----------->GT1   tgttatcagagagagcaagaattctaaaacctttcccacataaaccgtcgtccgatgaaactctataaccgtcaataaccgccgcgatttgaaaaataaa  15892400                                       --------->ANAC58                                       --------->ANAC46                                       --------->ANAC58                                    --------->TOE1(2)                                 ----------->RAV1(1)                              --------->ZAT6                                        --------->ANAC46    <---------ARR11(3)        --------->ANAC46               ----------->GT1        --------->ANAC58    --------->ARR11(3)      <-----------GT1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    --------->ANAC58 ->AHL20(2)                *TSS --------->ANAC46----------->GT1     --------->MYB52(1)     ---------- --AHL20(2)         <-----------GT1 --------->TOE2(2)      ---------->DOF2       --------->TOE1(2)   tacaaaaatctcattctccattaaaccatttaacacaacatacgaaaaactggtaaatcacaaaagaaaaaaacagagagaaacacacgaaaatggagaa  15892500                                          --------->LBD16                                          <------NtERF2                                          ------>NtERF2                                         --------->RRTF1(2)                                         ----------->RAV1(1)                                         --------->DEAR3(1)                                         --------->RAP2.6(2)                                         --------->RAP2.3(2)                                         --------->RRTF1(3)                                         --------->RAP2.3(3)                                        --------->RRTF1(1)                                        --------->RAP2.3(1)                                       <---------ATERF1(1)                                       ------>NtERF2                                       --------->LBD16                                       --------->At4g35610                                      --------->DEAR3(1)                                      --------->ANAC46                                    <---------ATERF1(1)                                   --------->ARR14(2)                                   <---------ARR14(2)                                  --------->ATERF1(1)                                 <---------ATERF1(1)                                 ------>NtERF2                             --------->ANAC46                    <---------DAG2     ---------->DOF2        <---------LBD16                   <---------ALFIN1    <------ZmHOX2a(1)     <---------REM1(2)             --------->AtMYB61    --------->AtMYB61    <-- ->GT1            --------->YAB1--------->DEAR3(1)--------->AtMYB61      --------->WRKY38(1)      ---   aacagaggaaagcgtcggaatcagagtttacacggcgactccgccgcaaaaaccatcaccatcaccaccttctcgttcaccaaaacccgtcttaatctct  15892600                           --------->At4g35610                           ------>NtERF2                           <---------At4g35610                          --------->DEAR3(1)                         --------->ATERF1(1)                         --------->DEAR4(2)                         <------NtERF2                        <---------RAP2.3(1)                        <---------ATERF1(1)                        <---------DEAR4(2)                        ------>NtERF2                       --------->RAP2.3(3)                       <---------DEAR3(1)                       --------->RAP2.3(2)                       --------->DEAR3(1)                       --------->RAP2.6(2)                      --------->MYB46(3)                      --------->RAP2.3(1)                      <------NtERF2                      --------->RRTF1(1)                      --------->RAP2.6(1)                      --------->DEAR4(2)                      --------->ERF1                      --------->ORA47(2)                      --------->DEAR3(2)                      --------->ATERF1(1)                      <---------ABI4(2)                     --------->At4g35610                     <---------ATERF1(1)                    --------->ARR14(2)                  --------->At4g35610                  <---------At4g35610                <-----------RAV1(2)                               <------NtERF2               <---------MYB52(1)                               <---------ANAC46              <-----------HVH21                                --------->RAP2.3(1)             <---------TGA1a                                   <------NtERF2             --------->TGA1a                                 <---------RAP2.3(3)             --------->ANAC46                                <---------DEAR3(1)   <---------ANAC58 <---------ARR14(2)                       <---------RRTF1(3)   <---------ANAC58<------ZmHOX2a(1) <------ZmHOX2a(1)       --------->ALFIN1   ------------>MYB.PH3(1) -------ICU4 --------->O2--------->RAP2.3(1)            <---------AtLEC2        --------->MYB52(1) ------>ATHB12<-----------TGA1    <------ZmHOX2a(1) <-----------HVH21   --------->GLK1(1)   tcattgccttccctcccgtcaggagccgccgctggaggaggaagaggtcgaaaacgtcgcatggtggcgcaaggagttcaaaaaacggtttcgaagacat  15892700                                                                                  --------->ANAC58                                                                                --------->MYB52(1)                                                                      <---------ANAC46              -                                                                    --------->MYB52(1)             <-                           <---------ALFIN1                        ----------->HVH21        ------->GAMYB                  ----------->HVH21                                ----------->TGA1        <---------ALFIN1                  <---------ETT(1)                                <-----------HVH21------->GAMYB ----         --------->At4g35610                                     <---------ANAC58 <---------ANAC55(2)         <---------At4g35610                                     <---------ANAC58 --------->ANAC55(2)       <---------WRKY12 <------ZmHOX2a(1)                      <---------At5g28300--------->ANAC58 --   caatgctcgtcaacttccttccgacaggaacactcttgatgttcgaaatggttcttccatcaatataccgtgacggagactgtaacggaatcaacacact  15892800                                                                                                  ---                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                             --------                                                                                             <-------                                                                                          <---------TOE2(3)                                                                                    ------>ZmHOX2a(2)                                                                                   <------ZmHOX2a(2)                                                                                   --------->CCA1(2)                                <---------ANAC46                                  --------->ARR14(2)                        --------->ANAC46                                          <---------ARR11(3)      <---------At4g35610     --------->ARR11(3)                ---------->DOF2   --------->ARR14(3)   <-------TEIL        <---------LBD16                --------->At1g77200         --------->AGP1----- -------->ATHB12    <----------DOF2      <<<<<<<<<TBF1<---------ETT(1)            <---------ARR14(3) --------YAB1   <---------ANAC58<---------ANAC58     --------->DEAR3(2)           <---------ARR14(2) ----->YAB1------>ZmHOX2a(1)  <---------ARR11(3)    <---------At5g28300           --------->ARR11(3) ------->ICU4   <---------ANAC58<---------ANAC58   <-----------GT1              ----------->ARR10 ---   catgattcatctcctcttgcttctttgcgcaatgtcttgtttcttcttccattttaccgacagtttcaaagcatccgatgggaagatctactacggtttc  15892900  Previous    Next  AGI:  At5g39650.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G09157.1); similar to 52O08_3 [Brassica rapa subsp. pekinensis] (GB:AAZ67548.1); contains InterPro domain Protein of unknown function DUF679 (InterPro:IPR007770) Range:  from: 15892427    to: 15893344    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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