Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------AGP1                                               <---------CCA1(2)                                        --------->ANAC58                --------->At4g35610     --------->ANAC58                      <---------YAB1                <---------At4g35610 --------->ANAC58                       <----------DOF2    -------     <---------AtLEC2               --------->ANAC58                       <---------------AGL15 <---------ANAC58                   --------->ANAC46    --------->ALFIN1   --------------->AGL15    < <---------ANAC58                --------->ANAC46 ------>ZmHOX2a(2)  <---------ICU4           <------   cttccttgcattgcattgagctaagaattcaacacaagacgcaagtcttggatctaatgtgttgaactcaattcttacttttgatagaaacttcaacatc  15872000                     --------->TOE2(3)                                         <---------ARR14(2)                  <---------WRKY18(1)                                          --------->ARR11(3)                 --------->WRKY12                                              <---------ARR11(3)     --------->ARR11(3)                                                        --------->ARR14(2)     <---------ARR11(3)                      <---------YAB1                   <---------CCA1(2)    <<<<<<<<<RAP2.2  <---------MYB59      <------ZmHOX2a(2)                 --------->ANAC55(2) -->ARR11(3)     ----------->HVH21       --------->ARR11(3)             <----------DOF2 ----------DOF2--------->ANAC55(2)       <---------ARR11(3)       --------->TOE2(3) ---ARR11(3)   <---------ANAC55(2)  <-----------GT1               --------->TOE1(3)              ----   ttctttagatatcaaacacttgacctaaatcagccattatacagatcattttagagaattaccaaaaaccctaactttacatatctcgcattagattcca  15872100                     ------->TEIL                     <---------ARR14(2)                     --------->ARR14(2)                     --------->GLK1(2)                    <---------CCA1(2)                    <---------ARR14(1)                  <---------ANAC58                  <---------ANAC58                                         <-------TEIL               <---------WOX13(1)                                        <---------ARR14(2)             --------->ATHB12                                            <---------GLK1(2)             <--------ATHB1                --------->At4g35610           --------->ARR14(2)            --------->ICU4    <---------AHL20(2)                      --------->HSFB2a(2)            <---------YAB1  --------->AHL20(2)                        <---------HSFB2a(2)   --------->MYB52(1)<---------ARR11(1)    <---------At4g35610   --------->HSFC1(2) ----->AtLEC2<---------ICU4 <---------AHL20(2)               ----------->GT1--------->YAB1   --------   tgaaaaaacagagaatgattgcgaatctatataaatttgatattcagataacaacatcatacatcgtaacttccagattcataagagtcatagagatttg  15872200                                          --------->CCA1(2)                                         <---------ARR11(3)                                         --------->ARR11(3)                                  <---------ANAC46                                  <---------ANAC58  --------->GLK1(2)          <---------MYB59         <---------ANAC58--------->HSFC1(2)        -------->P            --------->ATHB12    --------->HSFB2a(1)                   <---------TOE2(3)        ------->TEIL          -------->HAHB4      <---------HSFC1(2)                    <---------TOE1(3) ->CCA1(2)--------->TOE2(3)  <---------ATHB12     <---------HSFB2a(1)                 ---------->DOF2   aagattaatctacctaaatcagagcattcaaatgattcgtgaagatataagaagattccatcacatagaaatgactcgttcttggaagtaaaggtttcga  15872300                 --------->ARR11(3)                 <---------ARR11(3)                --------->At4g35610           --------->ANAC46          <---------LBD16            --------->LBD16        <---------WRKY12           <---------LBD16        <---------ETT(2)         <---------SPL7        ----------->HVH21       ------>ZmHOX2a(2)        <---------DEAR3(1)     <------ZmHOX2a(2)                                                   <-        --------->ETT(2) --------->ARR14(2)                                <------ZmHOX2a(1)       --        <---------WRKY38(1) <---------YAB1                              <-----------RAV1(2)       <--       --------->SPL7    <---------ARR14(2)                            --------->TOE1(2)       <-----      <-----------HVH21--------->LBD16                                --------->ANAC58         ------  <---------At5g28300<---------LBD16<---------DEAR3(1)                --------->ANAC58        <------ <-----------GT1<---------At4g35610--------->SPL7                <------ZmHOX2a(1)      ---------->DOF2   attttaccggtcgacggaagctctccggttacgatcgtccggcgagatttagttgggaagtgaagaaggagaacgcaggagaagactgaagaaagggttt  15872400                                  <---------MYB52(1)                                    --------->MYB46(3)                           <---------HSFB2a(1)                                        ------>MYB46(1)                           <---------HSFC1(2)                                         ------>MYB83        <---------ANAC46   <---------MYB46(3)                                         --------->MYB52(1)        <---------ANAC55(2)--------->HSFB2a(1)                                      <---------MYB59 <---------ANAC46          --------->HSFC1(2)                           --------->GLK1(2) --------At4g35610  <-----------GT1                                     --------->ARR14(2) ------->At4g35610  *TSS <---------MYB52(1)                             <---------ARR14(2) ---------RAV1(1)   --------->MYB52(1)   <---------REM1(1)    --------->MYB59    --------->ARR14(2) ----ARR14(2) ----------->GT1   <------MYB46(1)          <---------AHL20(2)      <---------ARR14(2) --->ARR14(2)<---------TOE2(3)  <------MYB83             --------->AHL20(1) ----------->RAV1(1)   <-- ---GLK1(1)  <---------TOE1(3) --------->MYB59           --------->AHL20(2)<---------ETT(1)      <---   ctgctgtgttaagtgaaggtaataaccgatggttcggtttgtgatgaagccaaatagaattaattaggcatgcgattccgacagaaccgaaccgatatta  15872500                                                 --------->HSFB2a(2)                                             <---------ANAC46                               <--------                                             <---------ANAC58                              --------->At5g28300                                            <------NtERF2                              ------------>AtMYB77                                          <---------DEAR3(1)                           --------->MYB52(1)                                         <---------MYB52(1)                           ----------->HVH21                                       <---------MYB46(3)                             --------->DEAR3(1)                                      ------>ZmHOX2a(2)                               ------->GAMYB                                     <------ZmHOX2a(2)                               --------->MYB46(3)        <---------ARR14(2)          --------->ARR14(2)                               --------->DEAR3(2)        --------->ARR14(2)          <---------ARR14(2)                             --------->MYB52(1) ----ZmHOX2a(1)                     <-----------HVH21    <---------YAB1        <-------TEIL<-------GAMYB -------ID1                   <---------ZAT14<---------ANAC58                 <--------P  <---------MYB46(3)   ggacaaatcggttctgttcttgatgaagtgagtaaaccgatcgggtggcttctaaaattatgttttggttcgattcagaggtagataaccgacggttaac  15872600                                                                                         <---------AHL20(2)                                                                                         <---------YAB1                                                                                        <---------AHL20(1)                                                                                      <---------YAB1                        --------->YAB1                                                <---------TOE2(3)              --------->At5g28300                                                   <---------AHL20(2)             ----------->GT1                                                        --------->AHL20(2)           <---------ZAT14        <------NtERF2           <---------YAB1           <---------AHL20(2)       --------->ZAT6 <----------DOF2                ------->TEIL                  --------->AHL20(2)    <---------YAB1   --------->TOE2(3)         <---------AHL20(2)          <<<<<<<<<GATA-1  <-------- -MYB52(1) --------->ZAT14      --------->ETT(1)  <---------YAB1    <-------TEIL--------->AHL20(2)   tgcattctaatactacagtaaaacctttataatgtcgggactactatattttatgaatttataactgaaattcatttatctataaattaatattattatt  15872700                     --------->YAB1                   <---------YAB1                 <---------AHL20(2)                --------->ICU4                --------->AHL20(2)                                      --------->AHL20(2)              <---------ICU4                                            <---------ICU4            <---------TOE2(3)                                          <---------ATHB51          <---------AHL20(2)                 <---------AHL20(2)        <---------AHL20(2)          --------->AHL20(2)         <---------AHL20(2)                <---------ATHB12         <---------AHL20(2)          <---------YAB1                    --------->AHL20(2)         --------->AHL20(2)      <---------YAB1              <---------AHL20(2) -YAB1--------->AHL20(2)---------->DOF2  ----------->GT1     --------->AHL20(2)   tcagagtataaattaatatttattaataaagttttatttttaattgttaaattttagaaaaatataaattcaaataatttctaatgaaattgatagtttg  15872800                                     <---------O2                                     --------->bZIP60(1)                                     <---------bZIP60(1)                                     <---------bZIP60(2)                              xxxxxxxxxxxxxxx                                  ----------->HVH21                                   xxxxxxxxxxxxxxx                                ----------->GT1                           --------->YAB1                                <------MYB83  --------->AHL20(2)          ----------->GT1         <--                                <------MYB46(1)                      --------->AHL20(2)          ----                               <---------MYB46(3)               ----------->GT1     <------ZmHOX2a(1)                             <---------MYB52(1)                 <----------ID1      xxxxxxxxxxxxxxxxx                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)---------->DOF2--------->AHL20(2)------     --------->YAB1      xxxxxxxxxxxxxxxx>smallRNA(s)  --------->MYB52(1)<---------YAB1     --------- <---------AHL20(2)      xxxxxxxxxxxxxxxx>smallRNA(i)--------->MYB46(3)  ----------->GT1  ---------->DOF2   gattttataaaaacaaacaaatttagggtccgattggtgacatgactaaaaaataacaaacagaaaaagaaaaaaatgataaaataggaatgaaaaggtg  15872900  Previous    Next  AGI:  At5g39600.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93996.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61020.1) Range:  from: 15871157    to: 15872420    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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