Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                 ------>MYB83                   -----                                                                 ------>MYB46(1)              <------                                                               <---------MYB59          <---------ICU4                                                         <---------ICU4                XXXXXXXXXXXXXX                            --------->YAB1        <---------ARR11(1)             <---------ARR11(1)                            -------->HAHB4        <---------ARR14(2)             --------->ARR14(2)                           <---------YAB1         --------->ARR14(2)             <---------ARR14(2)                           <---------ATHB12      <---------ARR14(1)             <---------ARR14(1)                          <---------TOE2(3)      <---------CCA1(2)              <---------CCA1(2)   tgggtgaagtccaaatatgaacaaaactaatgatacaaactcaatagcaccgtatccaaatatgaccaaactcaatagcaccgtatccaaatatgaccaa  15868200                                                   --------->AHL20(2)                                                   <---------AHL20(2)                                                   <---------YAB1                <---------AHL20(2)                --------->AHL20(1)                --------->AHL20(2)                <---------AHL20(2)               <---------WOX13(1)                 <---------AHL20(1)             <---------ICU4                       --------->AHL20(2)             --------->ATHB12                 <---------AHL20(2)             <--------ATHB1                  --------->AHL20(2)             --------->YAB1                <---------AHL20(1)      --------->LBD16 ->MYB83    <---------YAB1                 --------->AHL20(1)     --------->ANAC46 ->MYB46(1) --------->ICU4                --------->AHL20(2)     <---------LBD16 ---MYB59   <---------ATHB12         --------->TOE2(3)         <-----------GT1 XXXXXX>MIR864-5P                    <---------MYB59    <-----------GT1                      --------   actcaaataagacaatgattaattagacagtgtatggaacctaaatatataatataattttctattttccgcaaaaacacattttctctcaaactcaaag  15868300                                                  <---------AHL20(2)                                               --------->ARR11(3)                                               <---------ARR11(3)                                               --------->AHL20(1)                                               <---------AHL20(1)                                             <---------ARR11(3)                                             --------->ARR11(3)                                <-----                                             <---------AHL20(1)                                ------                      <---------AHL20(2)     --------->AHL20(1)                                ------                <-----------GT1       ----------->GT1                                        --------            <---------AHL20(2)  <---------------AGL15                                        <-------            --------->AHL20(2)  --------------->AGL15                                        <-------           <---------AHL20(2)  ----------------->AG                                          -------- -->DOF2   --------->AHL20(2)  ----------------->AGL1   ----------->GT1                 ----------->GT1   aattgcatattttttaaattacattttttttttgccaaaattgtaaaaatattttttggagttaaaatgtcaatgtaaactccaaatagctagaaaatat  15868400 ----AHL20(1)                                    <---------ARR11(3) --->AHL20(1)                                    --------->ICU4 --->ARR11(3)                                    --------->ARR11(3) ->ARR11(3)                     <----------DOF2  --------->AHL20(1) --ARR11(3)                     <---------DAG2   <---------AHL20(1)         <-------TEIL       ------ --AHL20(1)             <----------DOF2   ----------->GT1      --------->ARR14(2)        <---------ICU4 ->AHL20(1)         <---------PCF2    <----------DOF2          <---------ARR14(2)       <---------ATHB12   tttgaaatagacaaatttagtgggagctttgaaactttttcttttggtgaaaatattagttggggtattcggcttaaatacattttgctaatcagtccgg  15868500                                                         <---------ARR14(2)                                                         --------->GLK1(2)                                                         --------->ARR14(2)                    <---------LBD16                   <---------ANAC58                  <---------ARR14(2)                  <---------ANAC58                --------->LBD16                       <---------ANAC46         <---------HSFB2a(2)       <------------CBF  <------NtERF2         <---------HSFC1(1)  <<<<<<<<<GATA-3       --------->ALFIN1         --------->HSFB2a(2) <<<<<<<<<GATA-2     --------->ANAC55(2)         --------->HSFC1(1)  <<<<<<<<<GATA-4     <---------O2   ---------->DOF2        <-----------------AGL1  ------------>CBF <---------ANAC46   --------->AHL20(1)      --------->WOX13(1)    <---------ANAC55(1)   <---------AHL20(1)    <------ZmHOX2a(2)       <---------ANAC55(2)   <---------ICU4 --------->ARR14(2)             <---------ANAC58    <------ZmHOX2a(2)   <---------ARR11(3)    ------------>CBF        <---------bZIP60(2)<---------ARR11(3)   --------->ARR11(3) --------->LBD16     ------------>CBF ----------->GT1 ----->GT1    <---------LBD16<<<<<<<<<GATA-1     <---------ANAC58   --------->ARR11(3)            <--   tttaatattttctcgaaccggaaccggatcaatccacaattgactccaattacgtggcgaatcgtgaaaagatcatctatggaactgttcaaaaacgtct  15868600                    *TSS              <------ZmHOX2a(2)             --------->ARR11(3)                                                   ------->TEIL         ---------->DOF2          <---------ICU4                          --------->ARR14(2)     <---      --------->TOE2(3)           --------->YAB1         --------->KAN4(2)<---------ARR14(2)  -------    <---------AHL20(2)           <---------ATHB12       <---------ICU4    <---------GLK1(2)  <------- --------DOF2<---------ARR11(3)  --------->ICU4        <---------YAB1 <---------LBD16        <------ZmHOX2a(2)   ctttattttcttaaagatcaaaaacaaaatttctaatcatggactccaatttctctgatcattccctctaatttcggatttttgcatcttctccgatcat  15868700                                                                                             ------>ZmHOX2a(1)                                                                                             <-------                                                                                             ========                                                                                      --------->ARR11(3)                                           --------->At4g35610                        <---------ARR11(3)                                         --------->ATHB12                            <---------At4g35610                                         --------->YAB1                              <---------GLK1(1)                 --------->REM1(1)---------->DOF2                                    --------->GLK1(1) ------ICU4    <----------DOF2--------->ANAC58                ---------->DOF2     --------->LBD16 -->YAB1  <---------ANAC58    --------->ANAC58           --------->GLK1(1)       ------->GAMYB    <-- --ATHB12 <---------ANAC58    <----------ID1      --------->CCA1(2)             <---------LBD16 -----   cttcaccactatgggtgcttcatcttctacagacgacaaagaatcatcggagaaacgagaaatcgaaagccttgctgcttcaaccggagctcttcctctg  15868800         ------>ZmHOX2a(1)       --------->HSFB2a(1)       --------->HSFC1(2)       <---------HSFC1(2)      <------ZmHOX2a(2)     --------->ARR11(3)     <---------ARR11(3)     <---------ARR14(2)     --------->ARR14(2)                                      <---------TOE2(3) --At4g35610                            --------------->AtSPL8    <---------YAB1 ============HOX2a_HOX2a <---------GLK1(2)                   <---------TOE1(3)  <---------MYB52(1) --------DOF2            <---------ARR14(2)             --------->TOE2(3) <---------GLK1(1) ---->At4g35610          --------->ARR14(2)    <----------DOF2----------->GT1  <-------GAMYB        <   cttaaacgatccttctccaaactcgtcgattctcaaaccaatactgttccttttcaatccttgaaggtataattcgatttccgttaatctgggttttcaa  15868900                                        <----------DOF2                                     --------->ARR14(2)                                     --------->ARR11(3)                                     <---------ARR11(3)                                     <---------ARR14(2)                                    <---------CCA1(2)             <---------At4g35610     <---------ANAC46        <---------AHL20(2)             <<<<<<<<<<MYB80     ----------->GT1        --------->YAB1       --------->At4g35610                               --   ----------->GT1         <---------YAB1        <---------At4g35610             <---------YAB1   ---   <---------ANAC46   ----------->GT1<---------AGP1---------->DOF2--------->At4g35610     <------ZmHOX2a(1) ---------GLK1(2)    <---------TOE1(3) ------>ZmHOX2a(2)  <---------AtMYB61    <---------ICU4--------   tagaatcgtgtataatctaacttagggttataaaaattggatctttgtttcagcaaagttttggtttgagctacgatacaattactactgaaggagagca  15869000                                                                    --------------->AGL15                                             <----------DOF2        <---------ANAC46                                        <------ZmHOX2a(2)           <---------------AGL15                                       --------->ARR11(3)          ----------------->AGL3  <-------GAMYB                                       <---------ARR11(3)          ----------------->AGL2 <---------ANAC46                                      <------ZmHOX2a(1)            ----------------->AGL1 <------MYB83 ------->DAG2                       <---------TOE2(3)          <---------ANAC58           <------MYB46(1) ------->DOF2          <-----------RAV1(1) <---------YAB1      <---------ANAC58 <------ZmHOX2a(1) --->GT1     ---------->ARF1    <----------DOF2      <---------ARR14(2)  ---------->DOF2 --------->MYB59   aaaagtttcagacttgtttcccaaattgttggagcatttaggatcatctttagtagatttgttcttcgtgcctgataaagaaggattgagttgggttgag  15869100  Previous    Next  AGI:  At5g39590.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO61019.1); contains InterPro domain TLDc (InterPro:IPR006571) Range:  from: 15868620    to: 15871218    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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