Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 ----                                                                                                 <---                                      <---------YAB1                                            -----                                      <---------AHL20(2)                                        <----                               <---------MYB46(3)                                    <----------CDC5       <----------DOF2 <---------AHL20(1)            <---------AHL20(2)             --------->At4g35610 ---->ANAC58           --------->AHL20(1)  ----------->GT1                         --------->RAP2.6(2) ---->ANAC58           --------->ARR11(3) <---------ICU4  --------->TOE1(2)        >>>>>>>>>AtERF-4 ---ICU4   <---------ANAC46   <---------WOX13(1) --------->AHL20(2)                --------->RAP2.3(2) -->YAB1   <---------ANAC58 --------->ATHB12     <---------AHL20(2) <---------ARR14(2) ---------->DOF2 --ATHB12  <---------ANAC58<---------YAB1--------->ICU4   --------->TOE2(2)       --------->RAP2.3(1)   gacatagttctttgcttatatatgatatattgattgttgtataattagtatatatataaacttacgagagaaaccgaatcacgagccgctaaggccaaga  15865900                                                                                                <----                                                                                            <--------                                                                                            <--------                                                                                            <------NtERF2                                                                                          <----------                                                                                          --------->DEAR3(1)                                                                                         --------->ATERF1(1)                                                                                        ------>NtERF2  --------->At4g35610                                                                  --------->ANAC46  <---------At4g35610               <---------ZAT2                              <---------TOE1(3) ----->CCA1(2)                      --------->ZAT2    <<<<<<<<<WRKY18           <---------TOE2(3) ----->GLK1(1)                      --------->At4g35610                      --------->DOF5.7(2)----- ------GLK1(1)                      <---------At4g35610      --------->TOE2(3) <---------DOF5.7(2) <- ---->ARR11(3)               ------>NtERF2        <------NtERF2            <---------MYB46(3) <------ -----ARR11(3)       <------ZmHOX2a(1) ------>NtERF2--------->TOE2(3)     <---------TOE2(3)------>NtERF2   tatcagcacaagagacaacaccaggacatgctgcctcgagctgcctcttggcatcgtcaatgacctcaaaaccatggaggttaacgtttgcgccagcggt  15866000                             ------>MYB83          <------MYB46(1)  <---------MYB52(2)          <------MYB83     --------->DEAR3(1)         --------->MYB111(1) ------>MYB46(1)            <---------ICU4         --------->MYB59   <---------MYB46(2)           --------->YAB1     <---------ZAT6       --------->ANAC58             --------->ICU4 -----ARR14(2)            --------->ANAC58             <---------ATHB12                           --- -At4g35610            <---------ABI4(2)             --------->WOX13(1)                          <--- -------------WRI1  ---------->DOF2      --------->TOE1(2)                                       ---- -RAV1(2)--------->MYB46(2)--------->MYB46(3)   ---------->DOF2  <---------ZAT18 --------->LBD16----- ---->ARR14(2) ----------->GT1     --------->YAB1 --------->ANAC58              <---------LBD16 <---- ---------DOF2 --------->LBD16 --------->MYB46(3) --------->ANAC58             <---------LBD16  <---- ---MYB46(3)  ----------------->AGL3     --------->TOE2(3)<---------YAB1     -------->P  <xxxxxxxxxxx   tctttcagagttaggtcccgataaaagcaccgaaccatcacaaccttggacaaagcaatcatggttgtgcattctcagtaacccgggtgcaacctttgga  15866100                                                                                       --------------                                                                                  <---------ANAC58                                                                                  <---------ANAC58            <---------At4g35610                                                 ------->TEIL     ---------->DOF2                                                            --------->SPL7   --------->MYB46(3)                                --------->ANAC58          <---------CCA1(2) --->ZmHOX2a(2)                                      --------->ANAC58        --------->TOE1(1) ------At4g35610                                     <---------ANAC55(2)     --------->TOE2(1) ----->At4g35610       <---------MYB46(3)            --------->ANAC55(2)    ------>ZmHOX2a(1) ---->ARR14(2)   <<<<<<<<<<<<<<<<<LFY             --------->ZAT18        <------ZmHOX2a(2) -----ARR14(2)   ----------->RAV1(1)              <---------ZAT18       <---------GLK1(2) -----AGP1  --------->At4g35610             <----------DOF2             <---------ARR14(2)       <--- xxxxxxxxsmallRNA(se3)--------->ALFIN1    <------NtERF2                 --------->ARR14(2)  ---------   tctgaaccaaagtgagatgccacagtggtccgaacaattgtctcggcattagggcacgtagtcgagtagaacccgatcctcgtaccttggccataaacgg  15866200                                      ------>ZmHOX2a(2)                                   --------->ATHB12               <---------MYB46(3)             <------ZmHOX2a(1)    <---------ATHB12     <-----------GT1             ================================HOX2a_HOX2a---------->ID1        <---------MYB52(2)---------->DOF2    --------->ANAC58     <------MYB46(1) --->AGL1  <---------TOE2(3)--------->ANAC58 --------->ANAC58     <------MYB83                      < ------DEAR3(1)          --------->AtMYB61   ------>MYB46(1)  <-----------RAV1(1)      --------->ANAC58 >MYB52(1)--------->MYB52(1)--------->ANAC58 ------>MYB83 <----------DOF2              --------->ANAC58   cgatgagacaactaaggaagactatgaccaaagcaaatgatcggaccaagcccattttttctttttgttggtttgtgttttagataagaccgcaagtgtg  15866300                                     ----------->GT1                                    *TSS                                   ---------->DOF2                              <---------AtLEC2                               ----------->GT1       <- ---------ANAC46             <-------TEIL --------->CCA1(2)           <------------CBF    --------->ICU4   tttcgagttagtagatagagtttgttttagatgcatggaaagtgatacgagaacgtgagtaacttatagagggattgagaagtcaaatggtgatgttgaa  15866400                                                                                              -------                                                                                      <------MYB83                                                                                      <------MYB46(1)                                                                                    <---------WOX13(1)                                                                                  --------->ATHB12      --------->DAG2                                                             <---------YAB1    ---------->DOF2    ----------->GT1                                         --------->ANAC55(2) <- --------->At4g35610  <---------TOE2(3)                                        <---------ANAC55(2) <- <---------At4g35610  <---------TOE1(3)   ------>NtERF2                     <---------MYB52(1)<------ <------NtERF2    <---------ZAT14        --------->DEAR3(1)                <----------DOF2    ------- --------WRKY12  --------->ALFIN1   --------->MYB52(1)                   --------->LBD16      <------   gtcagcgaaaggggctagagtgttgaggtaatttgacaaaacgacgacgttgtaatccaattcaaaactgaaaaccgcgttatgtgattggtcatgagct  15866500            <---------YAB1           <---------TOE2(3)          <---------DOF5.7(2)         --------->WRKY38(1)         ----------->HVH21         --------->WRKY45     <------MYB46(1)       <-------GAMYB          <---------ANAC58                                             <---------ICU4       <----------DOF2        <---------ANAC58                                             <--------HAHB4   <---------LBD16    <------ZmHOX2a(2)                                                    --------->ATHB12 ---------->CDC5     <---------ARR14(2)                                                   <---------ATHB12 -->ZAT2 --------->WRKY12<-----------RAV1(1)                                       <---------ANAC46 < --------ANAC58      <---------ARR11(3)  ---------->ID1                      <---------AHL20(2)   --- --------ANAC58      --------->ARR11(3) <-----------GT1                      --------->AHL20(2)  <--- ---At4g35610       <---------At4g35610----------------------->TaNAC69(2)------>ZmHOX2a(1)--------->ICU4 -->At4g35610--------->ATHB12 <------MYB83   <----------DOF2 --------->YAB1 --------->AHL20(2) ------ ---ZAT2--------->DOF5.7(2)   <---------ANAC46      --------->MYB52(2)  <---------MYB59   <---------YAB1   ggcttcgcgcgttgacgattgcagatcatgttgggtttgttttttctcttttgttcgtttctatcaaactaattcctaattaatagtgtgtaatcattta  15866600      <---------YAB1                                                <------ZmHOX2a(1)   ------->TEIL                                                   <---------TOE2(3)      <---------RVE1(1) ---------YAB1                            <---------YAB1   --------------->AGL15         <---------CCA1(1) ------>YAB1                    ----------->GT1            <---------------AGL15        <---------ARR11(3) ------YAB1       <------------CBF      <----------DOF2    <----------DOF2              --------->ARR11(3) --->YAB1<---------YAB1    <---------At4g35610    --------->ZAT6  <---------TOE1(3) <---------AtLEC2-   taatgaatgtgattatagaatattgttttagcaggcgttaaactttgattcaactctaattctttattaaggaaactcgtattagtgcatgatattttca  15866700             <----------DOF2           ------>MYB46(1)           ------>MYB83         --------->DEAR3(1)         --------->DREB2C(2)                                        --------->AHL20(2)         --------->DEAR4(1)                                      ----------->GT1        --------->DEAR3(2)                                      ----------->GT1        --------->ORA47(2)                     <----------DOF2  <---------ZAT6       ------->TEIL                     --------->AHL20(2)   --------->DAG2     <---------ZAT14                 ----------->GT1        ---------->DOF2           ------->TEIL     --------->ZAT14                <---------ZAT6    ---------->DOF2   --------->RVE1(1) ----------->CBF     ----------->GT1----------->GT1 <------ZmHOX2a(1)   --------->CCA1(1)   tctacaatgcaccgactttggactggttaatcgaataagtgttaaaatactttaggaaaagaaaaagtgttaaaatatccaaaacatgaacatccactat  15866800  Previous    Next  AGI:  At5g39580.1    Description:  peroxidase, putative. Identical to Peroxidase 62 precursor (PER62) [Arabidopsis Thaliana] (GB:Q9FKA4;GB:P93724); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G64120.1); similar to bacterial-induced peroxidase [Gossypium hirsutum] (GB:AAL73112.1); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 15864309    to: 15866336    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g39581.1    Description:  unknown protein Range:  from: 15866383    to: 15866529    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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