Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->AHL20(2)                        <---------AHL20(2)                        --------->AHL20(2)                        --------->YAB1                     <---------ICU4                    <---------AHL20(2)                                 --------->TOE2(3)           ----------->GT1<---------YAB1    --------->TOE1(3)    --------->ANAC46                   < ----------->GT1    <---------ATHB51 ---------->DOF2       --------->CCA1(2)                        - ---------TOE2(3)   --------->AHL20(2)   <------ZmHOX2a(1)<---------ARR11(3)                       -- ---------TOE1(3)   --------->ICU4   --------->MYB52(1)   --------->ARR11(3)---------->DOF2  -------- ------->DOF2   <---------YAB1 ----------->GT1    --------->AHL20(2)   --------->TOE1(3)  ---------->DOF2 -DOF2     --------->YAB1<---------AHL20(2) --------->TOE2(3)  --------->ANAC46      <---------CCA1(2)   taaaggtaaacaatggttataaataattaaaattggaaataaaggaccttaaaaatataagatatacacaaaaccttaaaaagcctcatatcaaaaggaa  15860800                                --------->TOE1(3)                                --------->TOE2(3)   <---------ARR11(3)    <---------AHL20(2)   --------->ARR11(3)    --------->AHL20(2)                                <---------ARR11(3) ---------AHL20(2)      --------->AHL20(2)                            ----------------->AG -------->AHL20(2)--------->TOE1(3)                                   ----------------->AGL1  ------- ------->AHL20(2) --------->TOE2(3)       --------->AHL20(2)  <----------DOF2--------->YAB1   ------- --->GT1          <---------MYB59  ---------->DOF2    <-------TEIL<----------DOF2             -------   attaaaatctacaaaataaacctaaatttaaaaaccataaaccaaaaaatatgaggcacattttctttcttttccaaaatcataaaccaaaaattcaaga  15860900               --------->AHL20(1)               <---------AHL20(1)               <---------AHL20(2)              --------->YAB1       --------->YAB1   <--------ATHB1   <---------ICU4                                                                   --------->LBD16   --------->ATHB51                                      --------->YAB1             ----------->GT1  --------->ICU4                                        <---------ATHB12           --------->LBD16  <---------ATHB12                                   <---------AHL20(2)           <---------LBD16  <---------ATHB51                                  --------->AHL20(2)       <------MYB46(1) -->ANAC46    <---------AHL20(2)                   <---------YAB1            <------MYB83 -->ANAC58    --------->AHL20(2)                 <--------HAHB4             --------->MYB59 -->ANAC58--------->AHL20(2)                    <---------YAB1              <---------AtMYB61     <--   cacaataattcataaattatattcgtttttgtaatatagtcccttaatgtattattaaatcatactttctcccatggtttggttcccggttaaatcagtc  15861000                                             <-------MYC3                                             ------->MYC2                                             <-------MYC4                                             ------->MYC4                                             ------->PIF5                                             ------->MYC3                                             <-------MYC2                                            <---------PIF3(3)                                            <---------TGA1a                                            --------->PIF3(3)                                            <---------O2                                            --------->TGA1a                                            --------->ANAC46                                            --------->O2                                          <---------ALFIN1                                         --------->TOE1(2)                                 <---------YAB1                               --------->YAB1<-------PIF5                            --------->WOX13(1)                           --------------->AGL15                                                    <                           <---------------AGL15                 --------->YAB1                     -                  ----------->GT1<---------TOE2(3)             --------->ARR14(2)          ==========            --------->YAB1----------------->AG           <---------WRKY18(1)               <------ZmHOX2a(1)            --------->AHL20(2)<---------ATHB12        <---------ANAC58 <---------ZAT18     ==========    ----------->GT1       ----------------->AGL1      <---------ANAC58<---------AtMYB61--------->At4g35610 ----NtERF2<<<<<<<<<ARR2<-----------GT1  --------->TOE2(2)    <---------GLK1(2)--------->AtLEC2     -   ggcaattggtacaatcaaattggttattaccaattaagataaacccacgtggcatagcttgcccgaatcgtagtggtctccatgtaaacagcaggaagat  15861100                 --------->YAB1         --------->ATHB51         -------->ATHB1         --------->AHL20(2)        <---------ATHB51        --------->ICU4                                                                            ---        <---------YAB1                                                                            ---    ------------>CBF                                                                          -------  ------>ZmHOX2a(2)                                                    <---------YAB1         <------ZmHOX2a(2) <------ZmHOX2a(2)                                          <---------ANAC46                 <------- ---------ARR14(2)                 <-----------GT1         --------->LBD16                   -------- -------->PCF2 --------->AtLEC2   <-----------GT1          ------>NtERF2                     -------- =======HOX2a_HOX2a   --------->ANAC58                   <---------LBD16               *TSS --------- ========HOX2a_HOX2a  --------->ANAC58            <<<<<<<<<TBF1    <---------GLK1(2)  <---------YAB1 -------->ARR14(2)    --------->ANAC46      ---------->ID1--------->LBD16          --------->ICU4 ---   gggatccacaattattcattcaaaacgcaacgtttttaaactcttcgtcttcttcttcccccgcgtataaattctcatttctgtcattttgatcagatcc  15861200      ---------->DOF2 ------------------------>ANAC81                    --------->SPL7 ------>ANAC46                                    <---------SPL7 ------>ANAC58                                    <---------RAP2.6(3)        <---------DEAR3(1) -->CCA1(2)                                      <---------ANAC58            <---------ETT(2) --ARR14(2)                                    ------>NtERF2                 --------->DEAR3(1) ->ARR14(2)                   --------->HSFB2a(1)<---------ANAC46         --------->O2 ->AGP1   ----------->GT1     <---------HSFC1(2)--------------->AtSPL8    <---------O2 >At4g35610                   <---------HSFB2a(1)<---------ANAC58----------->HVH21                 -- ------>ANAC58                --------->HSFC1(2)--------------->AtSPL3  ------->GAMYB              --   aagaaaccaaaagagtaaaacaaacacagagaagcttcttcttaaacgatgccgtactataccagagatgacaacgacgtcgacgatttcgatgagtttg  15861300                  <-------GAMYB                <---------AtMYB61              <---------MYB46(3)             <---------AtMYB61             --------->ALFIN1         --------->ZAT14         <---------ZAT14         --------->SPL7        <---------SPL1(1)       <---------SPL1(2)    --------->MYB52(1)       <---------SPL7    --------->bZIP60(1)   --------->SPL7      <---------ANAC46--------->ANAC58       <---------RAP2.6(3)                                    <      --------->DEAR3(1) <---------bZIP60(1) <---------SPL7                                         -    ------->GAMYB<---------MYB46(3)<---------ARR11(3)      ------>MYB46(1)                   <------NtERF2   --------->DEAR3(1) --------->ANAC58  --------->ANAC46   ------>MYB83                    <---------ANAC46   --------->ANAC46<---------ARR14(2)------>ZmHOX2a(2)   --------->AtMYB61              <-----------RAV1(1)   ------------------>SPL14----------->HVH21--------->DEAR3(1)<---------At4g35610     ----------->RAV1(2) ---->ZmHOX2a(2)<---------ANAC46--------->At5g28300--------->ARR14(2)                 <---------At4g35610 ------->MYB46(3)--------->MYB55(2)--------->ARR11(3)    <---------DAG2        ------>ZmHOX2a(1)  ---   atccaacgccgtacagtggtggttacgacatcacggtgatctacggccgtccgattccaccttccgatgagacttgttatcctctctcatctggtgtcga  15861400                                                   <---------SPL7--------->ARR11(3)         <---------ARR14(2)               ------->TEIL           <---------ARR11(3)         --------->ARR14(2)         <-------TEIL <---------At4g35610 <---------ICU4                    <------ZmHOX2a(2)           ------->TEIL     --------->ZAT18 --------->ATHB12                 <---------ARR14(2)        <---------REM1(1)   <---------ZAT14 ---------YAB1                    --------->ARR14(2) --------->SPL7             --------->ZAT14 -------->ICU4                    --------->AGP1 --------->At4g35610          --------->ZAT14<------- ------>YAB1                     --------->At4g35610--------->MYB52(1)        <---------ZAT14--------   tgatgatttcgaatacgagagacctgaatttactcagatccatgagccttctgcttacggtgatgaagctcttaacacagagtacagtagctattctcga  15861500           --------->ANAC58           --------->ANAC58          <---------LBD16                                                                <---------ARR14(2)        --------->ARR14(2)             <---------MYB46(3)                              --------->LBD16       <---------ALFIN1               <---------AtMYB61                        ------>ZmHOX2a(2)      --------->MYB46(3)            <---------MYB46(3)                         ======================      <---------MYB52(2)           <---------DEAR3(1)                         <---------At4g35610      --------->ANAC58             <---------AtMYB61                         <---------AGP1      ----------->HVH21            --------->ALFIN1                 ------>ZmHOX2a(1)<---------LBD16      --------->ANAC58           <---------MYB46(3)                 ==================HOX2a_HOX2a      --------->ANAC46          <---------AtMYB61                   --------->LBD16  <---------------      --------->bZIP60(2)       --------->ALFIN1                <---------ARR14(2) <---------ARR14(2) --------->ANAC58               <---------DEAR3(1)              --------->ARR14(2) --------->ARR14(2) --------->ANAC46        <---------ARR14(2)                    ------>MYB83  ------->TEIL--------->ARR14(2) --------->ANAC58        --------->ARR14(2) --------->ICU4     ------>MYB46(1)--------->At4g35610 <-- --HSFB2a(2)  <----------DOF2 <---------At4g35610            <---------MYB59 <---------ARR14(2)   === ->HSFB2a(2)--------->LBD16 <-----------RAV1(2)        ---------->DOF2       --------->ARR14(2)   ===   cccaagccacgacccgcatttcgacccgattcaggtggtggtggtcatgttcaaggtgaaagaccaaatcctggttatggatctgaatccggttatggga  15861600                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                   <---------ARR14(2)                   --------->ARR14(2)                   --------->GLK1(2)                   --------->ARR11(3)                   <-----------ARR10                --------->ANAC58                --------->ANAC55(2)                <---------ANAC55(2)             <---------SPL7           <---------------AtSPL3        <---------At4g35610        --------->At4g35610       --------->GLK1(2)                                           --------->ZAT14       --------->ARR14(2)                                          <---------ZAT14      --------->ARR14(2)                                           --------->At4g35610      <---------GLK1(2)                                            <---------ZAT2       <---------YAB1      <---------ARR14(2)                                --------->ETT(1)         ------>ZmHOX2a(2)    --------->LBD16------->TEIL --------->ZAT18     <---------AtMYB61          ------->TEIL  <---------LBD16  <---------AGP1    --------->MYB52(1) <---------DEAR3(1)     --------->ARR11(3) ====HOX2a_HOX2a--------->ANAC58<---------ZAT18 <---------ANAC46   --------->ZAT2==================== --AGL2<---------ARR14(2)   <---------AtMYB61--------->ALFIN1      <---------At4g35610  <---------AtMYB61 ----ZmHOX2a(1)<XXXXXXXXXXXXXXXXXXXXMIR842<---------AtMYB61 --------->GLK1(1)  --------->ARR14(2) ===========================HOX2a_HOX2a   <---------DEAR3(1)<---------GLK1(1)  <---------ARR14(2)<--- ==========================HOX2a_HOX2a    --------->ALFIN1<------NtERF2        <---------AGP1    ====   ggaaaccggaatctgagtacggatctggctatggtggacaaacggaggtggagtatggtcggagacctgagcagagttatggatctggttatggtggaag  15861700  Previous    Next  AGI:  At5g39570.1    Description:  unknown protein Range:  from: 15861187    to: 15863406    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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