Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ANAC58              <---------ANAC46              <---------ANAC58         xxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->LBD16    <---------ANAC46                                                          --------->AHL20(1)   <---------LBD16                                            -------->P      <---------AHL20(1)  <-----------GT1                                        --------->GLK1(2)    --------->ARR11(3) -------AHL20(2)           --------->ATHB12              ------->TEIL--------->ANAC58 ----->AHL20(1)           ----------->ARR10              <---------ARR14(2) --------->AHL20(1) ------AHL20(1)          <--------P                      --------->ARR14(2) --------->ARR11(3) ----->ARR11(3)      <---------ANAC58                    <-----------ARR10  <---------AHL20(1) ------ARR11(3)      <---------ANAC46                    <---------ARR11(1) <---------ARR11(3) ----->AHL20(2)      <---------ANAC58                   <---------ARR14(1) --------->YAB1 ------AHL20(2)     <---------LBD16           --------->AHL20(2)    ------->TEIL >MYB46(3)   --------->MYB59     <---------ANAC46  --------->MYB52(1)--------->ANAC58             <--   atatttacgggtaattgggtatttcgggttgatttgggtatatatgaataaaaaaaccgaatctaacccgaacccaaaaatattttgggtatttttggtt  15838300                             ------>MYB46(1)                             ------>MYB83                           --------->DEAR3(1)                                              ------>MYB83                          --------->MYB46(3)                                               --------->MYB52(1)                        ------>MYB83                  <---------MYB59                      -------->P                        --------->MYB52(1)         --------->MYB52(1)                      ------>MYB46(1)                        ------>MYB46(1)            ------>MYB83                           ------>ZmHOX2a(1)                      ------->GAMYB              <---------MYB59                         <---------MYB111(1)                      <---------MYB59         --------->ARR14(2)                         <---------MYB111(2)                   <-----------GT1      <---------ARR14(2)                              --------->TOE1(1)          <-----------GT1 --------->DEAR3(2)  <---------ARR14(2)                      ------->GAMYB  <-----------GT1  --------->MYB52(1)   --------->ARR14(2)                    <xxxxxxxxxxxxxxxxsmallRNA(s) -------YAB1    --------->YAB1    <---------ALFIN1 ------>MYB46(1)--------->ARR14(2) --------->MYB46(3)   atttttacatttttactaaaataaccgaaccgacccaaacccgaaccgaaaccgaaccgaatttttagaatactcgaatggttctcaacctcctacccga  15838400                                                    ------>NtERF2                                                   --------->ANAC46                                                   ===============================bZIP_DOF                                                   --------->O2                                     --------->GLK1(1)                                     <---------GLK1(1)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                   xxxxxxxxxxxxxxxx>smallRNA(s)                       <---------MYB52(2)          --------->TGA1a            ----------->GT1    --------->MYB52(1)  <---------ALFIN1            --------->LBD16   xxxxxxxxxxxxxxxx>smallRNA(s)                                      <----           --------->LBD16 ----------------->AGL1  --------->ANAC58               <---------MYB52(2)           --------->ANAC46<-----------------AGL1  --------->ANAC58      ----------->GT1      <------          <---------LBD16 ------->TEIL           <---------ATERF1(1)     <----------ID1      --------  --------->ANAC46   --------->MYB52(1)          <---------ALFIN1      ---------->DOF2 <----------DOF2   atagacccaatacccggaaaaaaaaacgaacccgaacgggtacccgaatgcccacgcctcaattaagaacagaaaaagaaaaaaactaactttcagtgac  15838500                                                        --------->ANAC58                                                     --------->LBD16                                                    --------->ANAC58                                                    --------->ANAC58                                                    --------->ANAC46                                                  <------ZmHOX2a(2)                                                  --------->CCA1(2)                                                  --------->ARR14(1)                                                 <---------GLK1(2)                                                 --------->ARR14(2)                                                 --------->ARR11(3)                                                 <---------ARR14(2)                                                 --------->AGP1                         ------>ZmHOX2a(2)                                                 <---------ARR11(3)                    --------->CCA1(2)                                                --------->GLK1(1)                      <------ZmHOX2a(2)                                                <---------At4g35610                   <---------ARR11(3)                                                --------->At4g35610                   <---------ARR14(2)                                                <---------GLK1(1)                     <---------AGP1                                     --------------->AGL15                            --------->AGP1                                     <---------------AGL15                            --------->ARR14(3)                                    ----------------->AGL2                            <---------ARR14(3)                                    <-----------------AGL1       --------->ANAC58     --------->ARR14(2)  ---------->DOF2        <----------DOF2 <---------ICU4 --------->ANAC58              --------->ARR11(3) --------->YAB1<---------HSFB2a(2)  ----------------->AGL3       --------->ANAC46    --------->RVE1(1) -----ANAC46   --------->HSFB2a(2)--------->REM1(1)------>ZmHOX2a(2)       <------------CBF ---ZAT18  <---------ZAT18      ----------->RAV1(1)<---------LBD16    --------->At4g35610 --->HVH21 --------->ZAT18   --------->ANAC46  ----------->ARR10 --------->ANAC58 ---------->DOF2  --   ctataaaagtttgggccctagaagagtcttttcgcaacaccaaaaatggcagatccgcaagcccaacaaggcagtggcattgccaaaagatctggacaaa  15838600                                                                                     --------->ANAC58                                                                                     --------->ANAC58                                                                                     --------->ANAC46                                                ------->GAMYB                       <-------TEIL                                                --------->DEAR3(1)                  ------->TEIL             <---------ZAT18                   --------->DEAR3(2)                   --------->SPL7             --------->ZAT18            <-----------GT1                           <---------SPL7            <---------ANAC46         <---------ICU4                             <---------------AtSPL8           <---------------AtSPL8   --------->AHL20(2)                          --------------->AtSPL3         --------->ALFIN1           <---------AHL20(2)                <------ZmHOX2a(2)       <---------O2                 <---------YAB1                    *TSS --------->YAB1       --------->O2               --------->CCA1(2)          <-----------GT1    <---------------AtSPL3  <----------ID1           <---------REM1(1)   --------->MYB46(3)    <---------ARR11(3) -------->DOF2   ---------->DOF2<------ZmHOX2a(1)<-----------HVH21   --------->ARR11(3)          <---   aaaaaggccaagtggtgtacaaagcctagatgtaggatataattactcaaccgtcgaacatattttccatagatcattcatagacgtacgcatcatcaaa  15838700                                                       --------->SPL7 <---------MYB52(1)                                                     <---------SPL7   --------->DOF5.7(2)                                                   --------------->AtSPL8----------------->AGL1                                                  ------>NtERF2      <-----------HVH21                                         <-----------GT1     ------>ZmHOX2a(1)                                  <------ZmHOX2a(2)--------------->AtSPL3<-----------------AGL1<-----                                  ==================================HOX2a_HOX2a <---------TOE1(2)                               --------->MYB46(3)--------->DEAR3(1) --------->ANAC46          <------ ------ATHB12         --------->YAB1    <-----------GT1------->TEIL--------->LBD16            <------   tcaattcatcgtcgtcttccacaattgtcatcaccgatcgattttccgactccgacgtacctcctcttccccgttaccttctcaggtctcaatctggctt  15838800                                 <---------YAB1               --------->AHL20(2)       ---------->ID1      <---------YAB1                 ------>ZmHOX2a(1) -----DOF2           <----------DOF2                    ------>ZmHOX2a(2)       --------->LBD16 ---ANAC58           <---------DAG2       <----------DOF2<---------MYB59      <---------LBD16    <--- ---ANAC58         ------>ZmHOX2a(1)    <---------At4g35610   <---------AHL20(2)------>NtERF2  <-----   tctctatttttcgcctaattcctctttttctgattgtgattctgctttctaattttgatcctaattttttgtgcttatactccggctaaactcttccatt  15838900                   <-----------HVH21                   <-----------TGA1              <---------HSFC1(2)              --------->HSFC1(2)              --------->HSFB2a(1)              <---------HSFB2a(1)            <---------GLK1(2)                                                                     ---          --------->LBD16                ---------->ID1          <----------DOF2        <---------DAG2        <---------LBD16              <----------DOF2             <---------DAG2         <----------DOF2       --------->MYB52(1)            ------>ZmHOX2a(1) <---------MYB52(1)            ---------->ID1     <------ZmHOX2a(2) <---------ANAC55(2)            --------->LBD16               <-----------GT1--    <-----------HVH21  --------->ANAC55(2)   <----------DOF2  <-----------GT1     <-----------GT1---- ------MYB46(3) <-----------GT1      ======================HOX2a_HOX2a    <----------DOF2      <----- ----MYB52(1)<---------KAN4(2)<-----------TGA1      ------>ZmHOX2a(2)    <------------------------ANAC81   tgttccgatcaccggaattttcgtcacttattcgtcatcctttttctcttttgatccgtcaattttacttttctgtcttttttttttctcctttttcccc  15839000                           ------>ZmHOX2a(2)                         --------->ARR11(3)                     <---------ANAC55(2)                     <---------ANAC58 ------>ALFIN1       <---------ANAC58 ------->REM1(2)     --------->ANAC55(2)                         <---------ATHB12 ----->LBD16        ------->TEIL  <---------YAB1               --------->WOX13(1)     <----------DOF2 ----LBD16<----------DOF2<---------ARR11(3)              --------->ANAC46         <-----------GT1   gtgttgacatttctttcttctgtacgtgatctagttatcttagggttttggactgctatacaaaacaatcaattgattttagttttatcttttgaatcgt  15839100                                                                     <---------TOE2(3)                                                                <---------At4g35610                <-   <---------ICU4                                      ---------->DOF2                         <-----   <---------GLK1(2)                         ------->TEIL       --------->At4g35610    --------->YAB1   tgtaagaatttcaatagcctagtcttgttgatggttttgggctattgaatctgttcttaaagtttcagcttaatgtaatctgttcttaatcagaattagg  15839200  Previous    Next  AGI:  At5g39510.1    Description:  ATVTI11/ATVTI1A/SGR4/VTI11/VTI1A/ZIG (VESICLE TRANSPORT V-SNARE 11); receptor. Identical to Vesicle transport v-SNARE 11 (VTI11) [Arabidopsis Thaliana] (GB:Q9SEL6;GB:Q9FLY4); similar to VTI13 (vesicle transport v-SNARE 13), SNARE binding / receptor [Arabidopsis thaliana] (TAIR:AT3G29100.1); similar to vesicle transport v-SNARE 11-like [Solanum tuberosum] (GB:ABB29948.1); contains InterPro domain Vesicle transport v-SNARE; (InterPro:IPR007705) Range:  from: 15838670    to: 15841068    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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