Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   --                                                                                                  <--                                                                                    ------>ZmHOX2a(2)                                                                                   <---------GLK1(1)                                                                                   --------->GLK1(1)                                                                                  --------->ARR11(3)                    <---------YAB1                                                <---------ARR11(3)-                   --------->KAN4(2)                              --------->At4g35610        <------ZmHOX2a(2)       --------->ZAT6       --------->WRKY38(1)                   --------->ZAT2  <---------AGP1----- ---YAB1      --------->ARR11(3)                        --------->YAB1           <---------CCA1(2)--- >REM1(1)     <---------ARR11(3)              <-----------RAV1(1) <---------At4g35610  <----------DOF2   ttgtctcttacactaagagcttattcttcgttcaccatttctctattactgttgtctctcatagtagaagctgagcaaaatttggatctctttcgatccc  15832100                                                            --------->ANAC46                                                         <-------TEIL                                                         --------->ZAT18        --------->ANAC46   --------------->AtSPL3        --------->ZAT14      --------->HSFB2a(2)  <---------------AtSPL3        <---------ZAT14      <---------HSFB2a(2)  --------------->AtSPL8    --------->ANAC58 -----ZmHOX2a(2)           <---------------AtSPL8    --------->ANAC58      ================HOX2a_HOX2a ------->GLK1(1)     --------->ICU4            --------->At4g35610         <------ZmHOX2a(2)      <-- -------ARR14(2) ------>NtERF2               ------>ZmHOX2a(2)--------->ZAT14       ------>ZmHOX2a(1) ----->ZmHOX2a(2)--------->LBD16            --------->At4g35610           <---------ARR14(2)    <---- ---->LBD16    <---------LBD16              <---------At4g35610           --------->ARR14(2)<-------- ------>ARR14(2)--------->ANAC46           <---------ARR11(3) <---------ZAT14<---------ALFIN1   <----   gatctcttctacaaaactccgccatttttgtagtacctctctcgtgatctgcagcaaggtacactgaacttgtctcgatccacttcctcttacgctttcc  15832200                                                                                         <---------ZAT6                                                                               --------->CCA1(2)                                                                               <------ZmHOX2a(2)                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)                     ----------->GT1                                          <---------ARR14(2)                  <<<<<<<ZML2                                                 <---------AGP1      <-----------ARR10                                                       --------->AGP1      --------->ARR11(3)                                                    --------->MYB59   -------      <---------ARR11(3)                                                    ----------->ARR10 <------     <---------GLK1(2) <---------YAB1                                    <XXXXXXXXXXXXXXXXXXXXMIR865-5P -------MYB52(1)  <---------AGP1                   <-----------GT1  ------->TEIL------>ZmHOX2a(2) -----ANAC58   <---------HSFB2a(2)        <---------ANAC58  ------>ZmHOX2a(1) --------->ARR14(2) --DOF2        --------->HSFC1(1)         <---------ANAC58  ==========================HOX2a_HOX2a -----ANAC58   --------->HSFB2a(2)        <---------ANAC46  ===========================HOX2a_HOX2a   gttttcaaaatctccctctagaactgtgattagctcttaagttttcgtggtttttgctattcctctaatgaacttagttagatctgaatttgtgttactt  15832300                                                                            <------MYB46(1)                                                                            ----------->GT1                                                                        --------->ARR14(2)                                                                     <---------------AGL15                                                                    ----------------->AGL1                                                                    <-----------------AGL2         --                                                                    ----------------->AG          <--                                                         <---------At5g28300<------MYB83          ---                                                        <-----------GT1 <---------ARR14(2)        <--                                             --------->ARR11(3)   --------->ARR14(2)             <--- -->ANAC55(2)                     ------->TEIL ------>ZmHOX2a(2)  <---------ARR14(2)    --------->DAG2 ---ANAC55(2)        --------->GLK1(2)       <---------ARR11(3)  <---------GLK1(1)     ---------->DOF2   aagtttagttttagtcactgaaaattctgaaccatggatgttacatagatcgtataagttactgtatatatccgaatttggtgaaatgaaaaagtaagag  15832400                                                             --------->ALFIN1                                                           <---------ANAC46                                                      <---------ANAC58                                                      <---------ANAC58                                                  <---------ANAC58            --------->ARR14(2)               --------->ZAT2<---------ANAC58            <---------ARR14(2)   --------->WRKY38(1) --------->ATHB12 ------->GLK1(2)               <----------DOF2    <---------ANAC58        <---------WOX13(1) <------- -------GLK1(2)            --------->DAG2    <---------At4g35610         <------------CBF    <------- ------>ARR14(2)          ---------->DOF2    --------->At4g35610        --------->ATHB12     <------- -------ARR14(2)    <------------CBF         <---------ZAT2<---------ANAC58             --------->ALFIN1 ---ZmHOX2a(1)  ------>ZmHOX2a(1)--------->WRKY45 <---------AtLEC2     <---------YAB1  --------->ALFIN1   gaatctctaatctgaatcctgttattgaaaaagctttgactatttgcagcttgcatgcttggagtgtgttcttgtgattgagccaagaagttggggcgag  15832500                                                                                             <-------                                                                                             --------                                                                                      <---------ANAC46                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                                     --------->ATERF1(1)                                                                                     <------NtERF2                                                                                    <---------ATERF1(1)                                                                                    ------>NtERF2                                                                                    --------->ABI4(2)                                                                                   <---------DEAR3(1)                                                                                   --------->ALFIN1                                                                                  --------->ATERF1(1)                                                                                 <---------ANAC58                                                                                 <---------ANAC46                                                                                 <---------ANAC58                                                                                 <---------bZIP60(2)                         --------->ANAC58                                       <---------DEAR3(1)       --------->YAB1    ----------->GT1                                        <---------AtMYB61    <---------GLK1(1)    --------->ANAC58                                       --------->ALFIN1    --------->GLK1(1)--------->HSFB2a(2)                                       --------->ZAT18  <----  <---------ANAC58   <---------HSFB2a(2)                    --------->ANAC58   <-------TEIL <--------  <---------ANAC58  <---------LBD16    --------->AtLEC2     --------->ANAC58   <---------ABI4(1)----- --ANAC58          <---------LBD16   <---------ANAC46   <-----------HVH21---------->DOF2<------NtERF2 --ANAC46         ------>ZmHOX2a(1)  <---------AtLEC2  <---------bZIP60(1)    --------->ALFIN1 <----- --ANAC58    --------->YAB1 <-----------GT1            --------->bZIP60(1) --------->DAG2   ---------   tatggggtatcagaatcatccttcgggaagtaactcgttccatggagagttcaagagatgtcactccaaaccgtctaaaggtgcggtggcgtccatgatt  15832600 <-----------------AGL2                           <---------AtMYB61 --ICU4     <---------ZAT18                     <---------ANAC58 ->ATHB12   --------->ZAT18                     <---------ANAC58 -----AHL20(2)                  <------ZmHOX2a(1) --------->ALFIN1 -YAB1      --------->ZAT14    ----------->GT1  <---------ANAC46       <---------YAB1 ---->AHL20(2)           ----------->HVH21     <------NtERF2           --------->ICU4 ----WOX13(1)   <---------ARR14(2)       ------->TEIL             <---------At4g35610 >ICU4      <---------ZAT14 --------->ICU4   --------->ALFIN1     --------->At4g35610   aattctgaaattggtgcagttttggctgtgatgaggagaaatgtacggtggggtgttcgatatatagcagatgatgatcagttagagcattctcttatcc  15832700                        <---------CCA1(1)                        <---------RVE1(1)                       --------->ARR14(2)                       --------->ARR11(3)                       <---------ARR11(3)                       <---------ARR14(2)                   <---------At4g35610                                          <----------DOF2                   --------->At4g35610                                   ---------->DOF2              --------->ANAC55(2)                                <---------------AtSPL8              <---------ANAC55(2)     --------->ANAC58          --------------------->WRI1              <---------ANAC46        --------->ANAC58  <---------WRKY18(1)     <---------DAG2              <---------ANAC58      ---------->DOF2    --------->WRKY38(1)   <-----------------AG              <---------ANAC58<---------AtLEC2         --------->WRKY12  <-------TEIL       <--------   attctttgaaagaattgcgtaagcagatattttcatggcaaagcaattggcaatatgttgaccctagattgtacatacagccctttttggatgttatatt  15832800                                                         <-----------GT1                                                      ------>ZmHOX2a(2)                                                    <---------AGP1                                        --------->At4g35610                                        <---------At4g35610 ------->GAMYB                                    <-----------HVH21<------ZmHOX2a(2)                                 <----------DOF2    --------->ARR14(2)                                <---------ANAC58    --------->AGP1                                <---------ANAC58    <-----------ARR10         <-----------RAV1(1) <<<<<<<<<MYB2          <---------ARR11(3)                             --      ------->TEIL          <-------GAMYB           --------->ARR14(3)                             -- --------->At4g35610       <---------ANAC58         <---------ARR14(2)                      --------- <---------At4g35610       <---------ANAC46         <---------ARR14(3)               --------->At5g28300 -AHL20(2)                 <---------ANAC58         --------->ARR11(3)  <-----------GT1   <----------   gtctgatgaaactggtgctccgattactggcgttgctttgtcatctgtttacaagatcttaaccctcgaagtttttactcttgaaactgtgaatgtggga  15832900                                                             <-----------RAV1(2)                                                        ------>ZmHOX2a(1)                                                      ------>ZmHOX2a(2)                                                      ===================HOX2a_HOX2a                                                     <------ZmHOX2a(2)                                                     ====================HOX2a_HOX2a                                    <---------ANAC58<---------ARR14(2)           --------->YAB1           <---------ANAC58<---------GLK1(2)          <---------YAB1       --------->At4g35610  --------->ARR11(3)                        <------ ------->ANAC58         --------->At5g28300         --------->ARR14(2)              --------->ARR11(3) ------->ANAC58        ----------->GT1         --------->MYB52(1)                   <---------ARR14(2) >ALFIN1  <---------AHL20(2) --------->DAG2    <---------DOF5.7(2)<------ZmHOX2a(1) --------->ARR14(2) -RAV1(1)--------->AHL20(2) ---------->DOF2   ----------->HVH21--------->At4g35610  <---------ARR11(3)   gaggcaatgcatataatagttgatgctgtaaaaagctgtcgtttcgaggtaacggatcctgcctcagaggaagtggttttgatgaagatacttcaagttc  15833000  Previous    Next  AGI:  At5g39500.1    Description:  pattern formation protein, putative. similar to GN (GNOM) [Arabidopsis thaliana] (TAIR:AT1G13980.1); similar to sec7 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19610.1); similar to GNOM-like 1 protein [Nicotiana tabacum] (GB:ABP57378.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61434.1); similar to hypothetical protein OsI_012527 [Oryza sativa (indica cultivar-group)] (GB:EAY91294.1); contains InterPro domain SEC7-like; (InterPro:IPR000904) Range:  from: 15832502    to: 15837273    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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