Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------AtLEC2                                                 <---------ANAC58                            --------        --------->HSFB2a(2)                      <---------ANAC58 ----------->GT1            --------        <---------HSFB2a(2)         --------->ANAC46 ---------->ID1<------ZmHOX2a(1)    ---------->DOF2  <-----------ARR10--------->MYB52(1)        --------------------->WRI1        ---------->DOF2-------   tgcaactcttctcgatgtccataacgaaaccagggtataagaaactaccttgtttgtctcttccatggaggaaaaaacccttagagccatcaaagccgca  15806800                                                                                      --------->MYB46(3)                                                                                    ----------->RAV1(1)                                                                                   --------->MYB46(3)                                                                                 ----------->RAV1(1)                                                                                 ------>MYB46(1)                                                                                 ------>MYB83                                                                               --------->MYB46(3)                                                                            <---------ALFIN1                                                                            --------->DEAR3(1)                          <---------ANAC58                                <---------ATERF1(1)                       ----------->HVH21                      <---------LBD16  <---------MYB55(2)               ----------->HVH21         <<<<<<<<<GATA-3 <---------DAG2   --------->LBD16   ---------               --------->WRKY12          <<<<<<<<<GATA-2 --------------->AGL15--------->ANAC58        --------->MYB46(3)<---------ANAC58             -------->P       <---------LBD16------->GAMYB   --------->TOE2(3) --------->O2        <<<<<<<<<GATA-4 <---------------AGL15--------->ANAC46 ->RAP2.3(2)   --------->WRKY38(1)       <<<<<<<<<GATA-1<-----------------AGL3--------->ANAC58 ->RAP2.6(2)  <-----------HVH21         --------->ARR14(2)<----------DOF2--------->ANAC46   --------- -->LBD16 --------->MYB52(1)  ---------->ID1  ---------->DOF2<---------ANAC46------>NtERF2  ---------   aattatctcaaacaccggtgaccacttgacttggccctcttgaatccacaaaggagcaaccttttgtggaattatccggcacccaacaacagacaagaaa  15806900                                                                              --------->ANAC46                                                                              --------->ANAC58                                                <---------ARR14(2)  --------->AtMYB61                                                --------->ARR14(2)  --------->DEAR3(1)                                           --------->ANAC58         <---------ALFIN1  ------>MYB46(1)       <---------ANAC55(2)                 --------->ANAC46        --------->MYB46(3) ------>MYB83 >ANAC46                             <---------ANAC58            --------->REM1(1)  --------->TOE1(2) >ANAC58                             <---------ANAC58  ---------->DOF2 --------->AtMYB61---------->DOF2 >ANAC58               <---------TOE1(2)   --------->ANAC58<---------RAP2.6(2)--------->ANAC58 <-----   ccaggcatcacataaacaacattcccaagttcagggttttcttgcacccaaatcccaagaagcggcttcaccacctccacaagaaacctacaaagggcct  15807000                                                                                   --------->HSFB2a(2)                                                                            --------->ANAC58                                                                            =========================                 --------->ANAC58                                           =========================                 --------->ANAC58                                           <---------TGA1a              --------->ARR14(2)                                            --------->bZIP60(2)              <---------GLK1(2)                                             --------->TGA1a              <---------ARR14(2)                                            --------->O2          ------>ZmHOX2a(2)                      =====================================bZIP_DOF         <------ZmHOX2a(2)                       <----------DOF2            --------->ANAC58        --------->ARR11(3)                    <---------ARR11(3)            <---------O2        <---------ARR11(3)                    --------->ARR11(3)       --------->ANAC46        <---------ARR14(2)            ================================================bZIP_DOF        --------->ARR14(2)            ---------->DOF2                  --------->ANAC58       --------->GLK1(1)             --------->YAB1               <---------ZAT18  <---------LBD16<--       <---------GLK1(1)            <---------ATHB12              --------->ZAT14  <---------HSFB2a(2) ----ANAC46 --------->LBD16       --------->WOX13(1)<-----------GT1    --------->ANAC58           ---   tgtaagaagagatcccgattcgccattggactagttcaatcaaaggaagaacttttacttcttcacattgcacaagccacgtcttctcggaatcgacaag  15807100                                                                                                  ---               --------->LBD16                                                                    ---        <----------DOF2                        ---------->DOF2                                -------  ---------->DOF2                       <---------ANAC58                         <---------HSFB2a(2) ============bZIP_DOF                   <---------ANAC46                        <---------LBD16   --- ============bZIP_DOF                   <---------ANAC58           --------->At4g35610 ----------->GT1 -------ZAT18  ------>NtERF2        <-----------HVH21             ------->GAMYB<---------LBD16------- ------>ZAT18 --------->RAP2.6(2)  <-----------RAV1(1)         --------->MYB52(1)--------->HSFB2a(2)   ggcacaaagacttttgccgcacaagattagattgcaaatgtcgcttggagaaagaaaacgagagataacagcaaacacatcttcgggaagcgtaagaagc  15807200                                                                                           <---------AHL20(1)                                                            --------->MYB46(3)             --------->AHL20(2)                                                            <---------MYB55(2)             <---------AHL20(2)                                                           ------>MYB83                    <---------ARR11(3)                                                           ------>MYB46(1)                 --------->ARR11(3)   <---------ZAT2                                          --------->ANAC46           --------->AHL20(2)   --------->At4g35610                                     --------->ANAC58        ----------->GT1  --------->ANAC58                                         --------->ANAC58        --------->YAB1  --------->ANAC58                               ----------->RAV1(1)        --------->ANAC58 ------>ANAC58                                --------->ANAC46        --------->AHL20(2)   --------->AHL20(1) ------>ANAC46                                --------->ANAC58        <---------AHL20(2)  --------->AHL20(2) -->ANAC58       <---------ANAC46             --------->ANAC58  ----------->GT1   <---------ATHB12  - ------>ANAC58   <---------ANAC58       ------------>CBF --------->AtMYB61  --------->ANAC46      <-- -->ANAC58       <---------ANAC58  ---------->DOF2      --------->MYB46(3)  --------->ANAC58<--------   aagcaagctccaaacgattccttgttcatcatgtactaaaagtccaattcgcaacaaaaccacccaaggtaattaaacacacaaatgataaaatatattt  15807300                                              --------->ANAC46                                              --------->ANAC55(2)                                 <<<                                              --------->ANAC58                           <-----------                                              --------->ANAC58                         --------->GLK1(2) <---------------AtSPL8                    <---------SPL7                             <---------ARR14(2) --------------->AtSPL8                ------->GAMYB                            <----------DOF2 <---- --------->DOF2                     --------->MYB52(1)              --------->ANAC58  <---------GLK1(1) -------YAB1             ----------->GT1  <----------DOF2           --------->ANAC58  <---------GLK1(2) -AHL20(2)          --------->AHL20(2)--------->MYB46(3)         <---------ATHB12     --------->ARR14(2)   atgaaagtactcaaaatccaaatttaagagtaaaatagcaacggccttacgaaattcagactttgaaatcaagaaacacagcctttgggattctggtttt  15807400                                                            ---------->DOF2                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                                                       <---------ARR11(3)                                                       --------->ARR14(2)                                                       <---------AGP1  --------->ANAC58                                                       --------->ARR14(3)                                                       --------->ARR11(3)                                                       <---------ARR14(2)  --------->ANAC58                                                       <---------ARR14(3)  --------->ANAC58                                                      --------->RVE1(1)--------->ANAC58           --------->ANAC58                      <---------YAB1        --------->ANAC46        ------         ---------->DOF2                       --------->YAB1          <---------ANAC55(2)   ------>ZmHOX2a(1)      --------->YAB1                          <------ZmHOX2a(2)       --------->ZAT18       --------- <<<<<<<MYB80       --------->CCA1(2)        --------->ARR11(3)       <---------ZAT18       --------- ------AGL2--------->ANAC58                  <---------ARR11(3)     <---------SPL7      <---------GLK1(1) -----AtMYB61  ---------->DOF2   <---------TOE2(3) ---------->DOF2  --------->ZAT14     --------->GLK1(1)   ggtttgaatcagaaagcaaaagaaacgaggttatagaggtttctgaagatcataaaagatcttaaagcagagtacgcaaggaaaacgttgaaatcctcaa  15807500                                                                                             ------->MYC2                                                                                             <-------MYC2                                                                                         <-------TEIL                                                                                         --------->ZAT18                                                                                         <---------ZAT18                                                                                      <---------ANAC55(2)      ---------->DOF2                                                                 <---------ANAC58    --------->ANAC58                                                                  <---------ANAC55(1)    --------->ANAC58               <---------ICU4                                     <---------ANAC46 ----->RAV1(1)     <----------ID1 <---------YAB1               <---------ZAT6         <---------ANAC58 >TOE2(3)     ---------->DOF2   --------->YAB1      --------->TOE2(3)       --------->ZAT6   ------->MYC3 >TOE1(3)----------->GT1   --------->ALFIN1        ----------->GT1      --------->AHL20(2)   <-------MYC3   cataacaagaaaggcaaaaagacgacgaagtgtttgataattgtttgacaacttcgttaaatgtagttttaaaatttaaaactacaatacgtgcacatgg  15807600                        --------->YAB1                       <---------YAB1                     -------->ATHB1                     --------->YAB1                     <---------ICU4                    <---------AHL20(2)                    --------->ICU4                    <---------YAB1                    --------->AHL20(2)<---------AHL20(2)                    --------->AHL20(1)--------->AHL20(2)     <---------TOE2(3)           <-----------GT1                  <---------ICU4    --------->CCA1(2)     <---------YAB1             --------->AHL20(2)          <---------MYB46(3)       <---------ARR11(3)    --------->AHL20(1)          <---------AHL20(2)          ----------->GT1          --------->ARR11(3)   <---------ICU4               <---------YAB1         --------->ALFIN1 <---------YAB1               --------->ICU4           ----------->GT1   aatttttcaaggtggtttcaaaattattatagttgaagatttaaatactagtgtctaaatattatggaatagtatgttgaacgggttttaattaccagtc  15807700  Previous    Next  AGI:  At5g39460.1    Description:  F-box family protein. Identical to Putative F-box protein At5g39460 [Arabidopsis Thaliana] (GB:Q9FLZ1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G39480.1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G39490.1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G39450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71681.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 15805517    to: 15807232    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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