Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ANAC58                                                                                           --------->ANAC58                                                                                           --------->ANAC55(2)                                            <----------DOF2                                <---------ANAC55(2)                                            <---------DAG2     --------->ANAC58            --------->ANAC46                                       <-----------GT1         --------->ANAC58<------ZmHOX2a(2)                                      <-------TEIL        --------->At4g35610 <---------ARR11(3)                                     --------->CCA1(2)    <---------At4g35610<------ZmHOX2a(1)-------                                    <---------GLK1(2)   --------->YAB1 --------->ANAC58  --------->CCA1(2) -------->At5g28300           <------ZmHOX2a(1)  <---------LBD16       ----------->HVH21--------->ARR14(2) --------->GT1   ----------->GT1---------->DOF2  ----------->RAV1(2)   --------->ANAC58 <---------ARR14(2)   actgtaacttaaaacaaaattgagaaaacagaggaaaagattcacactttaccctgaatcagcacaagcagagacgacaggatcaccatggatacgaaac  15787200                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                               <-----                                                                                               <-----                                                                                             <------MYB83                            <---------------AtSPL8                   <---------At4g35610     <------MYB46(1)                        <<<<<<<<<<MYB80                              --------->At4g35610    <--------                       <------MYB46(1)                           ------->TEIL             <------ZmHOX2a(1)                       <------MYB83                         --------->At4g35610    ----------->RAV1(1)              <------ZmHOX2a(1) --------->ZAT14             <---------At4g35610   <----------ID1  <--  ----------->RAV1(1) --------->MYB59  <----------ID1     <-----------RAV1(2) <---------ARR14(2)<---- -->MYB52(1)<---------TOE2(3)   <---------ZAT14         <-----------HVH21    <------ZmHOX2a(1) ------   ggtccaacacaattgaggatgagtttggtttgagtacagagacgacgaagtgaatcagggtcagatgtatcagcagtgaggatagcgacagaggaaggtg  15787300              ------>NtERF2             <---------ORA47(2)             <---------ATERF1(1)             ------>NtERF2             <---------RAP2.3(1)            <---------RAP2.3(2)            <---------RAP2.3(3)            --------->ATERF1(2)           --------->SPL7          ------>NtERF2          <------NtERF2          --------->ALFIN1          <---------ATERF1(1)         <---------DEAR3(1)         <---------MYB46(3)        --------->ALFIN1        <---------ANAC46        <---------ANAC58        <---------ANAC58   <-------TEIL <---------PCF2 ---------DEAR3(2) ------MYB83<---------ATERF1(2) ------MYB46(1) --------MYB46(3)     <---------HSFB2a(2) ----DEAR3(1)<---------DEAR3(2)                         --------->LBD16 ----AtMYB61<---------DEAR3(1)                         --------->ANAC58      ------->GAMYB -AtMYB61<---------SPL7                                --------->ANAC58   <---------DOF5.7(2) -------ANAC46<------NtERF2                <---------ANAC46            <----------DOF2  <---------DEAR3(1) -----MYB46(3)--------->ATERF1(1)        <-----------HVH21 ---------->DOF2--------->MYB52(1)<-------- --->ALFIN1--------->ATERF1(1) ----------->GT1        --------->MYB46(3)--------->DOF5.7(2)--------->ALFIN1   gtgggttcgggcgggcggcccattcgagagattgggttaaacgggtcgggttacgacccgctaaagctagagactttaacggagaagaagacggtgtttg  15787400                                              <---------HSFC1(2)                                            --------->ARR14(2)                              <--------                                            <---------ARR14(2)                              <------MYB46(1)                                            <---------GLK1(2)                               <--------                                          --------->LBD16                                   <------MYB83                                      <---------ARR14(2)                                   --------->MYB59                                     <---------GLK1(1)                                     <---------MYB46(3)                                  --------->At5g28300                                      <------MYB83                                 ----------->GT1                                           <------MYB46(1)                              -------->P<---------LBD16                                  <--------P                          ------->TEIL--------->ARR14(2)                                 <<<<<<<<<MYB98                 ----------->TGA1--------->LBD16                                        <-------GAMYB                 ----------->HVH21<---------MYB52(1)          <---------CCA1(2)  <----------DOF2 --------->ARR11(3) <---------ETT(2)---------->DOF2--------->LBD16         <---------ARR14(2) -MYB46(3)<---------At4g35610 --------->MYB52(1)  <---------ANAC46         --------->ARR14(2)  <-----   aaggaacttgagagcttctctgacgacgtacttaccggtaaatccggatgctccgagtatgaccatatcgtaaaccggttcgggtttttgggttgggttc  15787500                                <---------ANAC58                     -------->HAHB4                       --------->ARR11(3)                            --------->YAB1                       --------->GLK1(2)                            <---------YAB1                       <-----------ARR10------>NtERF2             --------->YAB1                       <---------ARR14(2)                       --------->ARR11(3)                       <---------ARR11(3)                       <---------ARR11(3)     ------>ZmHOX2a(2) --------->ARR14(2)             <---------RVE1(1)                         <---- <---------YAB1       <---------GLK1(2)--------->DEAR3(1)      --------->YAB1                   ===== -ANAC58          ----------->GT1  --------->SPL7     <---------CCA1(1)               <----------DOF2 -ANAC58 --------->GLK1(2)      <---------ANAC58     <---------ARR11(3)               =============== --TEIL <---------GLK1(2) <----------DOF2            --------->ARR11(3)      --------->YAB1     -----   atcgtgatcggaatctaagacggagaatctttttgggttcgacgacgaagagatagatatttcgaagataataatacagtaatagtgtctttatggagct  15787600                               --------->ICU4                           <-----------TGA1                          --------->O2                --------->DEAR3(1)                --------->ETT(2)                <---------DEAR3(1)                <---------ETT(2)  <---------YAB1       --------->At1g77200<---------O2       =============================MYC_MYB       <---------ETT(1)   --------->bZIP60(2)       --------->DEAR3(1) --------->TGA1a       ------->GAMYB      --------->ANAC46       --------->DEAR4(1) --------->ANAC55(1)       ----------->HVH21  --------->ANAC55(2)       --------->DREB2C(2)--------->ANAC58      --------->DEAR3(2)  --------->ANAC58      --------->MYB46(3) <-----------STF1              <------ZmHOX2a(1)          ----------->GT1   --------->ZAT18  <-----------HVH21                <---------TOE1(3)            <------MYB46(1)   --------->ETT(2)--------->ANAC46   *TSS           <---------TOE2(3)            <------MYB83 ------DOF2  ----------------------->TaNAC69(2)   <---------AHL20(2)           <------------CBF ===================================bZIP_DOF----------->GT1    --------->GLK1(2)<---------WOX13(1) -- ===================================bZIP_DOF--------->YAB1 --------->YAB1     --------->ATHB12------- ---------------->WRI1  <---------ALFIN1  <------------CBF--------->ICU4     <---------YAB1   -------   ttgtgtccaccgacaacgtcgacgttacacgtcattgtgagtgaaattgtaatttaaggaataataatctgatttgattttgattggtatatcaaatagt  15787700             --------->ANAC46               --------->ANAC58                         ----------->GT1             --------->ANAC58               --------->ANAC58                    --------->ANAC58           --------->ANAC46                 --------->ANAC46                    --------->ANAC55(2)        --------->ZAT14                   <---------ALFIN1                --------->At4g35610 --------->ANAC55(2)                     <---------REM1(2)             ---------->DOF2 <---------ANAC55(2)              --------->HSFB2a(2)                ---------->DOF2 <---------ZAT6<- ------->ZAT6--------->ANAC58     <---------HSFB2a(2)         --------->CCA1(2) --------->ANAC58<---- ---->GT1  <---------ALFIN1      <---------ANAC55(2)         --------->ARR11(3) <---------ANAC55(2)-- -->YAB1<---------ZAT14   --------->YAB1 --------->ZAT14    <<<<<<<<<RAP2.2  <------NtERF2      -----   aacacttgacttcacacaccatttgtactcatattacgagaactacacgctgtctcagatttagatatagacaaagagcggcacgtagtgtaactaagat  15787800          <---------------AGL15          --------------->AGL15         <-----------------AG         =============================================================MADS_MADS         <-----------------AGL1     <---------MYB59     <---------DAG2     --------->TOE2(3) <---------MYB111(2)                                   --------->AHL20(2) <---------MYB46(2)                                    <---------AHL20(2) <------------MYB.PH3(2)                             <----------DOF2 <---------MYB111(1)                                 --------------->AGL15          --------->ANAC58 --------->MYB46(3)     --------->TOE2(3)            <---------------AGL15   --------->GLK1(2) ----------GT1         ----------->GT1         <----------DOF2              --------->DAG2 -----REM1(1)     <------ZmHOX2a(1)         <---------ARR11(3)        <---------LBD16    <---------ALFIN1 ----->TEIL  --------->TOE1(3)              --------->ARR11(3)    --------->ZAT14   --------->ANAC58 ------>GT1  --------->TOE2(3)       <-----------GT1<-----------------AGL3 ---------->DOF2         <-   gtaactaccttactaccttaggaaaatgttaaacttgtttaaccaagttctttctctttaattggaagtttactcggaaaagctgtaagcaccacttgat  15787900                          --------->At4g35610                        ------>ZmHOX2a(2)                       <------ZmHOX2a(2)          <------ZmHOX2a(1)                                                                         <          ====================HOX2a_HOX2a                                           <---------AHL20(2)          =====================HOX2a_HOX2a                   <XXXXXXXXXXXXXXXXXXXXXMIR2933A/B       <  --------->ARR11(3)  --------->ARR14(2)                 ----------->GT1          --------->AHL20(2)<  <---------ARR11(3)  <---------ARR14(2)          --------->LBD16      <---------MYB52(1)      <----- --------HSFB2a(2)<---------LBD16                 <-----------HVH21   <-------GAMYB<---------YAB1  --   tcgagatattgaggactagcctcggatccgatgacttatttgtgttttcttccgtcaaatggtgatttttttcgttgatttcatttttatttgtggtctt  15788000                       <---------GLK1(1)                      --------->ARR11(3)      --------------------->WRI1 ---------ANAC46    <---------TOE2(2) ---------ANAC58    <---------TOE1(2)                                                --------->AHL20(1) ---------ANAC58 <---------ANAC58                 ------->TEIL                  --------->AHL20(2) -----DOF2       <---------ANAC58    ------->TEIL<---------CCA1(2)         ----------->GT1 -------->ID1    <---------ANAC46   <---------CCA1(2)<----------DOF2    --------->YAB1   <-----------GT1   tttcgtatttttgtttatttcgtagatttcggtcttctgtatctcttcgttgtatctttgtattctataaacaaaaatagtataaaatatgttaccaaaa  15788100  Previous    Next  AGI:  At5g39410.1    Description:  binding / catalytic. Identical to Probable mitochondrial saccharopine dehydrogenase At5g39410 [Arabidopsis Thaliana] (GB:Q8LGI2;GB:Q9ZR98); similar to unnamed protein product [Vitis vinifera] (GB:CAO15039.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Saccharopine dehydrogenase (InterPro:IPR005097) Range:  from: 15785421    to: 15787638    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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