Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->ANAC58                                       --------->ANAC58                                      <---------ZAT18                                      --------->SPL7                                    <---------SPL7                                   <------MYB83                                   <------MYB46(1)                                   <---------MYB46(3)                                          <-----         <-----------GT1           <---------DEAR3(2)                               <-----------ARR10        <---------SPL7            <---------TOE1(2)                                 --------->GLK1(2)    <-----------RAV1(1)          <---------MYB52(1)                                 <---------ARR11(3) --------->GLK1(2)             <---------ANAC58                       ---------->DOF2          ------ ---------GLK1(2)              <---------ANAC58                    --------->AHL20(2)          <----- ->DOF2<---------REM1(1)    <----------DOF2                     ----------->GT1    <---------GLK1(2) ------>AGL1  <---------MYB52(1)<-------GAMYB              <---------HSFB2a(2)-------->P       ------   cagaaactgttgtaccgttttgaaaaactcctttcgttggtacgcttccttcgaacttgttcaagaagattaaaaagactaaccagaatctttccttcta  15782300                                              --------------->AGL15                                             <-----------------AGL1       <---------At4g35610                  ------>MYB83<---------ARR11(3)                     ------  <---------YAB1                            ------>MYB46(1)                                   ------- ----HSFB2a(2)                              -------->P  --------->ARR11(3)  <-----------HVH21 <------ --->HSFB2a(2)               --------->TOE2(3)======================================================= ----HSFC1(1)        --------->MYB52(1)    ------>ZmHOX2a(1)        ---------->DOF2      <---------ANAC55(2) --->HSFC1(1)    <---------------AtSPL3   <---------MYB59      <----------DOF2           --------->ANAC55(2)   gaagattatagctcatgttcaagtaccgaagcctaaatagcattcctacctcttgagggatattactttgaaaagagttgtcaccaagattaagtgatct  15782400                                                                                            <-------MYC3                                                         <---------ARR11(3)                 ------->MYC3 --------->CCA1(2)           =============================HOX2a_HOX2a        <---------ANAC58 >ZmHOX2a(2)                 <------ZmHOX2a(2)           --------->ARR11(3)  <---------ANAC58 -->At4g35610 --------------->AGL15            <---------ARR14(2)         <----------DOF2--------->AtMYB61 ---At4g35610 <---------------AGL15 --------->LBD16------>ZmHOX2a(1) <-----------GT1     <---------ALFIN1 =============================MADS_MADS        --------->ARR14(2) ----------->GT1    <---------ETT(1)   gagaaatgagagattaccaatagaaggtgagatcgaaccggacaatttgaatcctccaaggtctagacttgtaactctttcttgtttccgaccacatgta  15782500                                                                                                 <---                                                                                           <---------ANAC58                                             --------->ARR11(3)                            <---------ANAC58                                             <---------ARR11(3)                        ---------->DOF2                                       <---------At4g35610                          --------->ANAC46                    ---------->DOF2   ------->TEIL                                  --------->ANAC58             ---------->DOF2        ---------->DOF2                                 --------->ANAC58   atcccaatccaatggcaaagtggaaaggagtgattccatgaagctaagacctctctcttgttttcagtaacttgagacttgaactcaagcaaagcttgca  15782600                                                                                        =============                                                                                        ------>ZmHOX2a(2)                                                                                       ==============                                                                                       <------ZmHOX2a(2)                                                                                      <---------ARR14(2)                                                                                      --------->ARR14(2)                                                                                      <---------ARR11(3)                                                                                      <---------ARR14(3)                                                                                      --------->ARR14(3)                                                                                     <---------GLK1(1)                     <---------ANAC58                                                --------->GLK1(1)                     <---------ANAC58                                         ---------->DOF2                    --------->STY1(2)                                 --------->ANAC58--------->ARR11(3)                   ------>MYB46(1)                                    --------->ANAC58--------->AGP1- ------GLK1(1)     ------>MYB83         <-------TEIL                ---------->DOF2 ----------->ARR10   tatcagtctcatttgaaaacctagcttgagcaaaaactaagatgcaaacttgaagtaacatgagagcattgaaagcaaaaaaaagagagatcttcatgtc  15782700                                                                              <---------ICU4                                                                         <----------DOF2             ---------->DOF2                                            --------->TOE2(3)         <------ZmHOX2a(1)                                     --------->ANAC46        ----------->GT1                                        --------->ANAC58   --------->YAB1                         ----------------->AGL1       --------->At4g35610  <---------YAB1                          ----------------->AGL2  ------->TEIL<---------MYB46(3) ===============HOX2a_HOX2a        <---------AHL20(2)          --------->ANAC58 ===============HOX2a_HOX2a       --------->AHL20(2)         --------->ZAT6   ----------->GT1 -------->YAB1               ------------>CBF       ---------->DOF2    <---------At4g35610  ---------   gattataagaaggataaaagaaaggttttgcttcaatttaaaatcccaaaaatgaaaagactaacacgaatttagcttaatggttacaaaactataagaa  15782800                     <---------ANAC58                     <---------ANAC58             ------------>CBF            --------->ANAC58            --------->ANAC58          --------->ANAC55(2)           --------->WRKY18(1)          ---------->DOF2           --------->CCA1(2) --------->ANAC58        --------->ANAC58           --------->ARR14(2) --------->ANAC58       <---------YAB1 <-----------HVH21   <---------ANAC46<-------TEIL   --------->ZAT6--------->WOX13(1)<-----------HVH21 >YAB1  --------->ANAC58           <---------ARR14(2) --------->ANAC46       ----------->HVH21   aatggtcaccaagaaagcaatttgcgtcgacttatgagatacgtcgtttgaataacacgacttctcatcagtcaaacttatgaccgtgtcagaaaaaaaa  15782900                               <----------DOF2                         <-----------ARR10                         --------->ARR11(3)                 <---------TOE2(3)                         <---------ARR11(3)                --------->YAB1                         <---------ARR14(2)             <------------CBF                 <------------CBF                 <-----------GT1     ------------>CBF    --------->ARR14(2)    --------->YAB1<---------YAB1   aaaaaaacacaatctcttgtattgacaaatcttctttcaaacatttgaatattaacaacattgatgatagcaactttcgaaaaaaaaaacatagcatata  15783000                                                                                                  >>>                                                                                                  >>>                                                                                                 ----                        <---------ANAC58                                                         ----                        <---------ANAC58                                                        -----                    <----------DOF2                               <------ZmHOX2a(2)             <<<<<                   <---------ICU4         <----------DOF2       <------ZmHOX2a(1)               -----                <---------GLK1(2)    ---------->DOF2        ---------->DOF2     <-----------GT1<-----           --------->MYB52(1)    ---------->DOF2          --------->YAB1      <----------TaMYB80-----   gttttgttcatactaatggaatctttacttgttagaaaagaaagctttagaattgaagaatcaaaaggatcactcttcttatatacccttatacattccc  15783100         --------->ANAC46        ----------------->AGL1        <-----------------AGL1        --------->MYB46(3)                                                               <-----------       <---------At5g28300                                                               ------------       -------->P                                                                       <------------      --------->MYB52(1)                                                                =============    <---------MYB52(2)                                                                  <------------ >>>>>>E2Fc                                                       <---------ZAT2        ------------- >>>>>>E2Fd                                                       --------->ZAT2        ------------- -->NtERF2                                                        <---------HSFB2a(1)--------->GLK1(1) ----->LBD16                                                      <---------HSFC1(2) --------->At4g35610 ---->ANAC58                                              ---------->DOF2       <-----------RAV1(2) <<<<<E2Fa               ----------->GT1                 <---------AHL20(2)     <---------LBD16    <- ---->ANAC46           ----------->GT1            --------->TOE2(3)<---------ANAC58  <---------At4g35610 ----LBD16         ---------->DOF2                --------->TOE1(3)<---------ANAC58<------ZmHOX2a(1) ---->ANAC58  <-----------RAV1(2)                 <---------MYB59 --------->HSFC1(2) <---------GLK1(1)   gccaaaactaaccgctacaggtaaagagagaaaataagagtagagagagaaacctaaatttaaagggaagcttggctaaatttcaggagctccaaaaatg  15783200  Previous    Next  AGI:  At5g39390.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to EFR (EF-TU RECEPTOR), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G20480.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83822.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 15780943    to: 15782697    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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