Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->YAB1                                                           --------->ANAC58                                                  --------->ANAC46                                                 --------->HSFB2a(2)      ----------->GT1         ---                                                 <---------HSFB2a(2)    --------->At4g35610       ---                         <---------ANAC55(2)  <-----------GT1  <---------YAB1                   -----                         --------->ANAC55(2)--------->KAN4(2)--------->YAB1               --------->At4g35610 --At4g35610            --------->MYB59 <------ZmHOX2a(1)  --------->ANAC58               <---------At4g35610   ataagaccatatgaacaagagtgagttatgtattcaaaaacaggaatatttccagacacagaagcatcataagaagcagaaaattcaaggagagctacac  15767800          ---------->DOF2       --------->LBD16      --------->ANAC58      --------->ANAC46                                        --------->MYB46(3)                  ---      --------->ANAC58           --------->DAG2               <---------MYB52(2)                -----     ------->GAMYB              ---------->DOF2            <----------ID1                      <----- ------>ANAC58             --------->ANAC58            ---------->DOF2                    --------->ZAT18 ------>ANAC58             --------->ANAC58   --------->ARR11(3)         --------->MYB46(3) --------- ---->ANAC46             ---------->DOF2 --------->ANAC46------------------------>ANAC81<-----------HVH21   aagacaacgcgcaaaagaatagactctgaaagcaaaaagcttcacgaagacattggcaaaaggaacaaaccaagaacaaacactcacaagtgtcccctgt  15767900                                                    --------->ANAC46                                                    --------->ANAC55(2)                                                    --------->ANAC58                 ------->GAMYB                                                    --------->ANAC58                 ================                                                <-----------TGA1                  <---------DOF5.7(2)         --------->TOE2(3)             ---------->DOF2                           <---------WRKY38(1) <---------At4g35610            <---------ZAT6 --------->ANAC46                  <---------WRKY12 --------->At4g35610       <---------At4g35610 --------->ANAC58                 --------->DOF5.7(2) ------->DOF2          <-----------HVH21       --------->bZIP60(2)             <-----------HVH21 ------>HVH21     <-----------GT1    <---------TOE2(3)                         --------->TOE2(3) ------HVH21 ----------->GT1   <---------TOE2(3)<-----------HVH21              --------->TOE1(3)<---- -->RAV1(2)---------->DOF2 --------->At4g35610 --------->ANAC58  --------->At5g28300--------->ANAC46   gaaagctgaaacctaaagttaaacccatcagctaatgttaagaaagaaaacgtcacgcagttctcactgtgaaatacaaaacgtcaacgcagtctcactg  15768000                                                                                   <------MYB46(1)                                                                                   <------MYB83                                                                                   <---------MYB46(3)                                                                           --------->ANAC58                  <---------ARR14(2)                                       --------->ANAC46             --------->ANAC46                                              --------->ANAC55(2)      <             --------->ANAC55(2)                                       <-----------TGA1             <             --------->ANAC58                                          <-----------HVH21        <----         <-----------HVH21                                            ===============================         <-----------TGA1                                             --------->O2--------->MYB59<---        --------->ANAC46                                              --------->TGA1a          <-----        --------->O2                                                  --------->ANAC58         <-----        --------->ANAC58                                              --------->ANAC46    --------->CCA1(2)        --------->ANAC58  --------->At5g28300--------->ANAC58         ===============================        --------->TGA1a  ----------->GT1     --------->ANAC58         --------->ANAC58 ----------->ARR10 =================MYC_MYB<---------ZAT6  <-----------HVH21--------->At5g28300   <---------MYB52(1)  < -------HVH21--------->ANAC58           <----------ID1   ----------->GT1   --------->ANAC58 <--------   tcaaatacaaacgtcacgcagttcttactgtaaaataagaaaacgtcaagcatttctcactgtaaaatacaaacgtcacgcagtttggttagatatgtcg  15768100        --------->AHL20(2)        <---------AHL20(2) <----------DOF2 ---------ANAC58                                                                               <----- ---------ANAC46                                                                              <------ ---GAMYB <------------CBF                                                         <---------ZAT18 ===========bZIP_DOF                                                               ------->GAMYB ------MYB52(1)          <---------GLK1(2)                            <----------CDC5         <------ ----ANAC58              <---------ARR11(3)       --------->AHL20(2) --------->LBD16          <------ ----ANAC58              --------->ARR11(3)       <---------AHL20(2)<---------ANAC46 ------->TEIL ===MYC_MYB   <---------ANAC58          <---------MYB52(1) <---------ZAT14        --------->ANAC58 -- ---------ANAC58  ------------>CBF ------->GAMYB<----------DOF2    <---------LBD16--------->ANAC58 -- ---RAV1(1)   <---------ANAC58    --------->MYB46(3)   --------->ATHB12        --------->MYB46(3) ---   ttgcttttaaaaaattgcgacccaatagatttttcaacagtcgtttttttctttaaatgagtgaagttttgcgcagagccaacaacgcacttagtagcgt  15768200                                                                                 --------->DEAR3(1)                                                                                 <---------DEAR3(1)                                                                          --------->TGA2(2)                                                                         <-----------HVH21                                                                         <-----------TGA1                                                                        --------->TGA1a                                                                        <---------TGA1a                                                                        --------->O2 <---------MYB46(3)                                                                        <---------O2<---------DEAR3(1)                                                                        --------->ANAC55(2)                                                                        <---------ANAC55(2)                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                        --------->ANAC46          ---                                                                        ======================MYC_MYB                                                                        --------->bZIP60(1)      ----         ------>MYB46(1)                                                <---------bZIP60(1)      ----         ------>MYB83                                                   --------->bZIP60(2)      ----        --------->WOX13(1)                                             <-----------STF1         <---- ------HVH21                                                        <-----------HVH21<---------DEAR3(2) ---ANAC46                                                      --------->ZAT6   <---------ATERF1(2)< ---ANAC58                            --------->WOX13(1)    <----------DOF2     <---------LBD16<----- ---ANAC58                     --------->At4g35610     ---------->DOF2<---------ALFIN1<-------GAMYB - ------->ANAC58                <---------ZAT2          ===========================bZIP_DOF   -------- ------->ANAC58                <---------At4g35610    --------->AtMYB61<-----------bZIP910(1)-------- ------>WOX13(1)         <----------DOF2<---------ATHB12    ======================bZIP_DOF   <-------   caagcaataccaatctctcttgaatcactttgcagctactcaatcaatttcaaaaaccaaagctttacactgccacgtcatcaccggcggtcgagtttcc  15768300                                                              --------->At4g35610   <---------GLK1(2)                                          <---------At4g35610 --->NtERF2                                                   <---------ZAT2 ----->LBD16                                             --------->ANAC46             --------->ARR11(3) -->NtERF2                                               --------->ANAC55(1)          <---------ARR11(3) ----->ANAC46                                            --------->ANAC58         ---------->DOF2 -----RAP2.6(2)                             --------->bZIP60(2)           <---------GLK1(1) ---------ALFIN1                            --------->bZIP60(1)           --------->GLK1(1) ----LBD16                       <---------MYB52(1)     ------->TEIL <---------HSFB2a(2) ---------->RAV1(1)   <---------MYB52(1)    <---------bZIP60(1)      --------->HSFB2a(2)      <------ ->GLK1(2)           --------->LBD16        --------->O2<---------LBD16  --------->ARR14(2)  <------- ->ARR14(2)         --------->ANAC46<---------ANAC46   <---------AtLEC2 <------ZmHOX2a(1)<----------DOF2 --ARR14(2)         --------->ANAC55(2) <-----------HVH21--------->ANAC58<---------ARR14(2)  <-------   ggccacattctctcgactctctccgtaacttatgcgttatgtggtcacatcacttatgcacggaagctgttcgaggaaatgcctcaaagctctttgcttt  15768400                               <---------TOE1(3)                          <---------ANAC46                          <---------ANAC58                         <-------TEIL                      <---------ANAC58                                        --------->ALFIN1  <----                     ------->TEIL                                     <---------MYB46(3)        <----                     <-------TEIL<------ZmHOX2a(1)                    <------MYB83 <-------GAMYB-----       ----------->GT1<---------ANAC58                                <------MYB46(1)      --------->ALFIN1  <-----------GT1<---------------AtSPL3                            <------ZmHOX2a(1)   <---------ANAC46 ----DOF2    --------->YAB1 ----------->HVH21          <---------ANAC58   --------->MYB52(2)   <----- --ANAC58   <---------YAB1<---------ANAC58             <---------ANAC46 <--------P----------->GT1---- --ANAC58<---------YAB1--------->TOE1(2)               <---------ANAC58<-------GAMYB   <---------ANAC55(1)   cttataacattgttattagaatgtacgtgcgtgaaggattgtatcacgatgcgattagcgtgtttattaggatggttagtgagggggttaagtgtgttcc  15768500                                                                                                -----                                                                                            <--------                                                                                            <------MYB46(1)                                                                               --------->ARR14(3)                                                                               <-----------ARR10-----                                                                               <---------AGP1   <----                                                                               <---------ARR14(3)                                                                  <---------MYB46(3)        <------MYB83                                                                <---------ANAC46           <---------AtMYB61                                                                <---------ANAC58          <--------P                                                                <---------ANAC58<------ZmHOX2a(2)                                                                <-------GAMYB  --------->ARR14(2)       --------------->AtSPL8                                  <------MYB46(1) --------->GLK1(2)-----  <-------GAMYB                                                --------->MYB52(2)       --------->ALFIN1 <------MYB83                                                  <------MYB83    <---------ARR14(2) ----------->GT1                                               --------->MYB55(2)      <------ZmHOX2a(1) <---------MYB46(3)            --------->ZAT2                  <---------MYB46(3)=============HOX2a_HOX2a <------MYB46(1)         ---------->DOF2                      --------->MYB111(1)------>ZmHOX2a(2) <- -----ANAC46        ---------->ID1                            <---------MYB46(3)==============HOX2a_HOX2a -----HSFB2a(2)   <---------MYB46(3)                          <---------AtMYB61<---------ARR11(3)<--- ---->HSFB2a(2)   <-----------RAV1(1)                        <--------P        --------->ARR11(3)<--- ----LBD16     <----------DOF2 --------->At4g35610          <-------GAMYB     <------ZmHOX2a(1) ----- ----->LBD16  <---------DAG2<---------At4g35610           <---------TOE2(3)  ----------->ARR10  <----   ggatggttatacatacccttttgttgctaaagctgctggagaattgaaatcgatgaaattggggttggttgttcatgggaggatcttgaggagttggttt  15768600 <------MYB83 <------MYB46(1) ---->MYB111(2) -MYB46(3)                                                      <---------ANAC46 ---->MYB46(2)                                       <------MYB83 -----MYB46(3)                                       <------MYB46(1)                              <-- ---->MYB59                                          ----------->GT1                              --- -------P                                       <---------HSFB2a(2)                               <-- ---MYB83                                       --------->HSFB2a(2)                            <----- ---MYB46(1)                                 <----------DOF2    <---------ANAC58              <------ ---->MYB111(1)          <---------MYB46(3)------->TEIL         <---------ANAC58          <---------ARR14(2) -----AtMYB61 --------->ZAT18        ------->TEIL   <---------AtMYB61                     --------->ARR14(2)   ggtagggataagtatgtgcagaacgcgttgttagcgatgtatatgaactttgggaaggttgaaatggcgagggatgtgtttgatgtgatgaagaaccgtg  15768700  Previous    Next  AGI:  At5g39340.1    Description:  AHP3/ATHP2 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 3); histidine phosphotransfer kinase. Identical to Histidine-containing phosphotransfer protein 3 (AHP3) [Arabidopsis Thaliana] (GB:Q9SAZ5;GB:Q9ZWM4); similar to AHP2 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2), histidine phosphotransfer kinase/ protein binding / signal transducer [Arabidopsis thaliana] (TAIR:AT3G29350.1); similar to putative histidine-containing phosphotransfer protein 3 [Populus x canadensis] (GB:CAH56501.1); contains InterPro domain Hpt (InterPro:IPR008207) Range:  from: 15766079    to: 15767735    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g39350.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G18750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15051.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68962.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 15768157    to: 15770190    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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