Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------ALFIN1                                                                         ----------------->AGL1                                                                        <-----------------AGL1                                                                        ------->TEIL             ----------->GT1  --------->LBD16                          <-----------GT1     --------->ATHB12        <---------ANAC46                       --------------->AtSPL8   <-------     -------->HAHB4          <---------ANAC55(2)                   <xxxxxxxxxxxxxxxxsmallRNA(i)     <---------ICU4          --------->ANAC55(2)                 <------NtERF2             <---------    --------->ICU4           <---------ANAC58                   --------->LBD16           <xxxxxxxxxx    <---------YAB1    <-----------HVH21                        <---------ANAC46        <---------ARR11(3) --------->ICU4  ---------->DOF2       --------->AHL20(2)      <---------RAP2.6(2)     --------->ARR11(3) -------->ARR11(3)    <-----------TGA1 <---------AHL20(2)     <---------LBD16<----------DOF2<-------- -------ZAT6----------->GT1  <---------ANAC58                 --------->RAP2.6(3)  ---------->DOF2xxx   gagataatgatggaagggtaaaagcgtcattccgtagtcatataaatggggtttttcgaagcattgcggcaatgtaccactttggaaaagattttaacat  15759600                              --------->ATHB51                              -------->ATHB1                             --------->ICU4                                <---------DAG2                             --------->AHL20(2)                  --------->YAB1                             <---------AHL20(2)                 <---------AHL20(2) --TOE2(3)       --------->AHL20(2)                            --------->AHL20(2) --GT1<----------DOF2     --------->AHL20(2)                --------->AHL20(2) xxxxxxxxxxxxxsmallRNA(si3)  <---------ATHB51  <---------HSFB2a(2)         <----------DOF2 ---GT1          <---------AHL20(2)----------->GT1          <---------AHL20(2)              <-------- xxxxxxxxxxxxxxx>smallRNA(le3)--------->ATHB12 --------->HSFB2a(2)   --------->ANAC46--------->ETT(1)   ttcagtccctttctcacaattaattctataaattattgagttaaattttctaaaacaaaaatttatataataagacacttttttttgtcggaaatttatg  15759700                                              <---------AHL20(2)                            <----------DOF2  <---------AHL20(1)                           <---------ANAC58  --------->AHL20(1)               --------->AHL20(1)     --------->ANAC46               <---------AHL20(1)     --------->ANAC58     <---------MYB46(3)    <---------ANAC58  --------->AHL20(2)     <-----------RAV1(1)  ---------->ID1     <---------AHL20(2)    --------->ANAC46  <----------DOF2 <---------AHL20(2)  --------->ANAC58            --------->MYB46(3)         -------- -AHL20(2)     <---------ARR11(3) <-----------GT1       --------->PCF5                  <---------AHL20(2)   gacacttttgttggcaatatttttttttggctttttttacacacaaatttatttcgaggtcccttctacccacaaatgttttggacattttttattcata  15759800                               <------NtERF2                              <---------ERF1                              <---------MYB46(3)                              <---------RAP2.3(1)                              ------>NtERF2                             <---------RAP2.6(2)                             <---------ANAC46                           <---------ATERF1(1)                           <---------ORA47(2)                           <---------DEAR4(2)                          <---------DEAR3(1)                         <---------ORA47(1)                         --------->ATERF1(1)                        <------NtERF2                        ------>NtERF2                       ----------->HVH21                     --------->At4g35610                     <---------At4g35610                     <------NtERF2                     --------->ATERF1(1)                     <---------LBD16                    <---------ERF1                    <---------RAP2.3(1)                    <---------ORA47(2)                   <---------RAP2.3(2)                   <---------DEAR3(1)                   <---------RAP2.3(3)                   --------->ETT(1)                   <---------DEAR4(1)                   <---------RAP2.6(2)                   <---------DREB2C(2)                   <---------RRTF1(3)                   <---------RRTF1(2)                   <---------At1g77200                  --------->RAP2.6(3)                  --------->DDF1                 <-----------HVH21                <-----------RAV1(1)            <------NtERF2--------->SPL7           --------->RAP2.6(2)<---------DEAR3(2)           ------>NtERF2<---------ATERF1(1)          <---------DEAR3(1)<------NtERF2                                         --------->ZAT18          <---------ATERF1(2)<---------DEAR3(1)                                  --------->ALFIN1          --------->ATERF1(2)<---------RAP2.3(2)                                --------->TOE1(2)         --------->RAP2.6(3)--------->ATERF1(1)                                 ------->MYC3        <---------ATERF1(1)<---------RAP2.3(1)          <---------ANAC46        <-------MYC3 ------>ZmHOX2a(1) ->YAB1--------->ANAC46<---------SPL7          --------->ICU4           ----------->GT1-------->P  <-   gacgataacacggcggcaatgtcggcggacggcggctagtgagtgagtaatgagttcgtcgtgcatagactctatggaaaaacgtgggctacctcctaca  15759900                                            <-----------GT1                                        <---------MYB52(1)                                 <---------HSFB2a(1)                                 --------->HSFB2a(1)                                 --------->HSFC1(2)                      <---------ICU4  <---------ANAC58              ------------>CBF <---------ARR11(3)                            --------------->AGL15         <---------MYB52(1)  --------->ANAC58                    --------->ANAC46        --------->TOE2(3)    --------->ANAC58        <---------ANAC58        <---------HSFB2a(2)      <---------YAB1--------->GLK1(2) <---------ANAC58        <-----------GT1--------->HSFB2a(2)      <---------TOE2(3)      --------->ANAC46    <----------DOF2 ------->GAMYB         ----------->RAV1(1)   --------->ICU4  --------->YAB1<---------HSFC1(2)  <---------ANAC46        <---------------AGL15 -----ZmHOX2a(1)  <---------ATHB12 <-----------GT1   <---------ANAC58    <----------DOF2  *TSS      -   aggacattatcgttatttcaataatctttccaagaaatttccgtttttgccctttgcgtttttttaaccgaaactctttctataaactgcaacattcttc  15760000                                                                    ----------->GT1                                                           <-----------ARR10                                                           ------->TEIL                                                           <---------ARR11(1)                                                           --------->GLK1(2)                                                           <---------ARR14(2)                                                           --------->ARR14(2)                ---------->ID1                            <---------CCA1(2)                         <             ------>ZmHOX2a(1)   ------>ZmHOX2a(1)      --------->ANAC58                            -       <<<<<<<<<TBF1            --------->TOE2(3)       --------->ANAC46         ------>ZmHOX2a(2)  -    <<<<<<<<<TBF1            ------>ZmHOX2a(1)          --------->ANAC58 --------->ARR11(3)         < ----->ZmHOX2a(1)  <---------MYB52(1)                --------->MYB46(3)>>>>>>>>>GT-1    <-----------GT1   tccttcttcttcttcctcgtcgtttcttctccttcctcaagagaacaacttcttaaccacgaatcttcagaggtaaatctcgatctctcttcaccatttt  15760100                                     <---------ARR14(2)                                     ------->TEIL                            <---------MYB52(1)                                     --------->ARR14(2)                   ------>ZmHOX2a(2)                                     <-----------ARR10                    <-------TEIL                                --------->At4g35610                      <------ZmHOX2a(2)                                <---------At4g35610                     <---------ARR14(2)                         <---------ARR14(2)                             --------->ARR14(2)   <-------TEIL          --------->GLK1(2)                              <---------ARR11(3) ---------At4g35610      --------->ARR14(2)                             --------->AGP1 -------->ZAT2          <---------GLK1(2)           <----------DOF2     --------->ARR11(3) -------->At4g35610  <---------HSFB2a(2)         ------>ZmHOX2a(2)     <---------GLK1(1) ---------ZAT2       --------->HSFB2a(2)        --------->GLK1(1)      --------->GLK1(1)           --   tgagctgcattgttgatttttctctagaatctgtagctgaatcttctctgatctctttctgaatcgttctaagagatccgttctctgtttttgaaatata  15760200                                                                                             --------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                           ------>ZmHOX2a(2)                                                <--------                          <------ZmHOX2a(2)                                                ------>ZmHOX2a(2)                         <---------ARR11(3)                                                <-------TEIL          <---------HSFB2a(2)                                                             <------ZmHOX2a(2)          <---------HSFC1(1)                                                             --------->AGP1          --------->HSFB2a(2)------>ZmHOX2a(1)                               <---------ARR11(3)      --------->ARR14(2) --------->ARR11(3)                                  --------->ARR11(3)     -      --------->GLK1(1)  <---------ARR14(2)                                  <---------GLK1(2)  -----      <---------GLK1(1)----------->ARR10                               --------->ANAC58  <---------ARR14(2)      <---------ARR14(2) --------->ARR14(2)    <---------ANAC46        --------->ANAC58  --------->ARR14(2) ------->CCA1(2)   ------->TEIL      <---------ZAT6                 <---------ATHB12   ----------->ARR10   gatttgagaattctcgaaatgtatgtagatcctgtgttagtcttagtttctgtgtatcgatttcttcgaaatcaagctagatttttgtttagatccgtgt  15760300  --------->LBD16 <---------ANAC46 <---------ANAC58 <---------ANAC58 <---------ANAC55(1) <---------ANAC55(2)                              <---------YAB1 ->LBD16                                          --------->ICU4 -ANAC55(2)                                     --------->YAB1 -ANAC46                                   ------>ZmHOX2a(2)          --------->ANAC58 -ANAC55(1)                               <------ZmHOX2a(2)           --------->ANAC58 -ANAC58                                 <---------ARR14(2)           --------->ANAC46 -ANAC58                   <---------AHL20(2)  <------ZmHOX2a(2)  --------->AtLEC2             ------ ----->ZmHOX2a(2)<---------YAB1          --------->ARR14(2)     <---------ANAC58               <----- ------>HVH21<---------WOX13(1)      <------ZmHOX2a(2)          <---------ANAC58            <--------   gatccgtgtgatttgagtgatttttgtgttttatttgagatcagatcggatcatgagtagtctcttccttgcacaccaagtgttcgacgtttttctacta  15760400                                                                                          <----------                                                                                         ------>ZmHOX2a(2)                                                                                         ============                                                                                         ============                                         <----------DOF2                                <------ZmHOX2a(2)               <---------At4g35610      ------>ZmHOX2a(2)                               =============           ------>ZmHOX2a(2)          <---------ARR11(3)                               --------->GLK1(2)          --------->CCA1(2)           --------->ARR11(3)                               <---------ARR14(3)          <------ZmHOX2a(2)   ------>ZmHOX2a(2)                                        --------->ARR14(3)         <-----------ARR10   <------ZmHOX2a(2)                                         --------->ARR11(3)         <---------ARR11(3) <---------AGP1                                      ----------->GT1         --------->ARR11(3) --------->AGP1                            ==========================HOX2a_HOX2a         <---------AGP1     <---------ARR11(3)                        =========================HOX2a_HOX2a         --------->AGP1     --------->ARR11(3)                        <------ZmHOX2a(1)<---------ARR14(2)         <---------ARR14(2) <---------ARR14(2)                       --------->ANAC46  <---------ARR11(3)         --------->ARR14(2) --------->ARR14(2)                     <---------LBD16     <---------AGP1 --------->AGL15           <---------CCA1(2)                    --------->GLK1(1)      --------->ARR14(2) ----------AGL15      <---------TOE2(3) =====================================HOX2a_HOX2a============= ---GT1 <---------CCA1(2) ----------->ARR10<---------AHL20(2)   <---------GLK1(1)    ----------->ARR10   tatatagtccagatctgagctcttaatgtagatctgtattgatctttatttgaattttgcagagagatttcaggaaacaaaatggtgaagatctgttgta  15760500  Previous    Next  AGI:  At5g39320.1    Description:  UDP-glucose 6-dehydrogenase, putative. Identical to Probable UDP-glucose 6-dehydrogenase 2 (UGD2) [Arabidopsis Thaliana] (GB:Q9FM01;GB:Q84MD5); similar to UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G29360.1); similar to UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT5G15490.1); similar to UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G29360.2); similar to UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (GB:Q96558); similar to hypothetical protein [Vitis vinifera] (GB:CAN62897.1); similar to putative UDP-glucose dehydrogenase 2 [Nicotiana tabacum Range:  from: 15759990    to: 15762171    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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