Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ------>ZmHOX2a(2)            --------->GLK1(1)            <---------GLK1(1)            <------ZmHOX2a(2)           <---------ARR14(2)           --------->ARR14(2)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           --------->ARR11(3)              <---------ARR14(2)        --------->ANAC58         --------->ALFIN1        --------->ANAC58       <---------ANAC46    ================HOX2a_HOX2a<---------ANAC55(1)          <---------ANAC58    ===============HOX2a_HOX2a <---------ANAC58             <---------ANAC46    <------ZmHOX2a(1)          <---------ANAC58             <---------ANAC58      <----------TaMYB80   <----------ID1             <-------TEIL --------->ARR14(2)         <---------LBD16  --------->ANAC58     --------->TGA1a  --------->ALFIN1   <-------TEIL          <---------ARR11(3)  --------->ANAC58     <---------TGA1a<---------ANAC46    --------->ALFIN1       --------->ARR11(3) -------HSFB2a(2)      --------->O2   <---------bZIP60(2) <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------>HSFB2a(2)    xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------ANAC46      --------->YAB1 ------->HVH21    --------->ANAC46<-----------HVH21     <---------ANAC58       <---------ATHB12 -----------------WRI1 <---------O2  <---------AtMYB61  <---------ANAC58--------->LBD16 -->TOE1(2)<---------ARR11(3)--------->ALFIN1          <---------DEAR3(1)------>NtERF2       <-------   cgacaaggacaaggatctctgagccacgagggtgcgtgtgaggtggattttggccatgcggtgcgtagtctatgcggaccaatgatattcccatggtgtt  15710400                       --------->ZAT6                      <---------At5g28300                        <---------ZAT18                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)       --------->LBD16                  --------->TOE1(3)                           <---------LBD16             --------->ARR11(3)        --------->At4g35610                                  <---------LBD16              --------->GLK1(2)        <---------At4g35610                       <---------ICU4------>NtERF2             <---------ARR11(3)        <------ZmHOX2a(2)                         --------->ATHB12           --------->TOE1(2)       --------->ARR14(2)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          --------->CCA1(1)       <---------ARR14(2)   <-----------HVH21    <---------YAB1--------->LBD16           --------->RVE1(1)  <---------LBD16 --------->TOE2(3) ---------->DOF2        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --ANAC46------>ZmHOX2a(2) <---------MYB46(3)    --------->ICU4--------->ANAC46    ----------->GT1<--   tagccctgggatctgatcaacattaacagtggtcacattagagccaacttgattattggtgttcccgggcacattgagacctgagaagaaaaaatctttt  15710500                                                                                         --------->TOE2(3)                             ------>MYB46(1)                                   --------->AHL20(1)                             ------>MYB83                                 <---------ARR11(3)                             -------->P                              ----------->GT1    --------->ANAC46                           <---------MYB111(1)                   ---------->DOF2   <-----------GT1                           --------->TOE2(2)             <---------AHL20(1)    --------->AHL20(2)                           --------->TOE1(2)             --------->AHL20(2)    <---------AHL20(2)   <                           <---------MYB59               --------->AHL20(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->YAB1    --------->AHL20(1)--------- -------AtLEC2   <----------DOF2              <---------AtLEC2 <---------YAB1  <---------AHL20(1) ---   gcatcgactcgcttcgggtctttacaaaacctaccattcacaaaaactgcatgtagaaatataatatcaaagagtatatattatattactacgtcaaagt  15710600                                                     <----------DOF2                                                     <---------DAG2                                                   ------>NtERF2                                                  --------->DEAR3(1)                                                 --------->DEAR3(2)                                             --------->ANAC55(2)                                             <---------ANAC58                                             <---------ANAC55(2)                                             <---------ANAC58                                            <---------------AtSPL3            --------->DAG2                  --------------->AtSPL3           ---------->DOF2               <----------DOF2                                            =      ----------->GT1                --------->GLK1(1)    --------->MYB59                           < --------->YAB1                      <---------GLK1(1)<----------DOF2                      <---------ZAT18 <---------ICU4                 --------->LBD16 ------->TEIL                               <---------ZAT14 ---------ATHB12              <---------LBD16--------->ANAC46             <---------ALFIN1--------->ALFIN1 ->DOF2<------ZmHOX2a(1)     --------->MYB52(1) --------->SPL7          ----------->RAV1(1)--------->ZAT18 ------>WOX13(1)            --------->MYB52(1)<---------SPL7    <---------YAB1          <---------ANAC46   taatcataaggagaaaagtagagaaatagataaccggagatttctttacgtaccgccttttaggtcatcaatggcaacacagaagtcttggagtggactt  15710700                                   --------->ATHB51                                   <---------ICU4                                   --------->YAB1                                  --------->ICU4                                  <---------ATHB51                           <---------ZAT18                                --------->WOX13(1)                          <---------ANAC58                             --------->ANAC58                               <---------ANAC58              ---------->DOF2--------->ANAC58                          <---------ICU4     --------->ANAC58      ---------->DOF2                             --------->ATHB51     --------->ANAC58     --------->AtMYB61   <----------ID1           --------->ATHB12 --------->YAB1        <------ZmHOX2a(1)    --------->DAG2            --------->ICU4             ---- =============================HOX2a_HOX2a ---------->DOF2             <---------YAB1            <---- ------ZmHOX2a(2)  ---------->DOF2<---------ATHB12            --------->GLK1(1)               <------   ggatcataagcattgacaaaggaaaggaccaaagcaattatggcaaaagggacaagagattgagaaaccctcattattgctcgctcttaatttgttatgc  15710800                                                                                            <--------                       <----------DOF2                                                    <---------AHL20(2)                      <---------ANAC58                                               <---------TOE2(3)                  <------------CBF                                                 --------->AHL20(2)                 <---------ICU4                                                    <---------AHL20(2)                 --------->ATHB12                                                 <---------YAB1                ------>ZmHOX2a(1)                                               <---------ICU4                <---------YAB1       <------ZmHOX2a(1)                         <---------ATHB51       ----------->GT1<---------ANAC58                                         <---------AHL20(2) --->TEIL   <---------ARR14(2) <---------AHL20(2)                              --------->AHL20(2) -----AtLEC2--------->ARR14(2)<-----------TBP               ----------->HVH21  --------->ICU4 ---YAB1 *TSS  --------->TOE2(3)    <----------ID1      --------->ICU4 --------->ZAT18--------->ICU4   atgtatacttggtgaatcctcattgctttaaaatttataggacaagagcatagaagtcatatttgacatggaatggactaaataattaatgtttaatgaa  15710900                   <----------DOF2              --------->ANAC58              --------->ANAC58             --------->SPL7           <---------SPL7          <------MYB83                                   <--------P          <------MYB46(1)                               <---------MYB52(1)         <---------------AtSPL3                   ----------->HVH21         --------->MYB46(2)                     --------->YAB1        <----------DOF2         --------->MYB111(1)                    <---------ICU4   --------->GLK1(1)         <---------------AtSPL8         <---------AHL20(2)       <---------GLK1(1) -TOE2(3)--------->MYB59                --------->AHL20(2)<---------MYB46(3)   <---------GLK1(2)   attacacaagtttggtacggacttttagttacaagagagcatttaaacaaaaatgaccggtagatggaattcctttagaaagattagccaaatgttgatg  15711000                                   ------>MYB83                                   ------>MYB46(1)                                  <---------ALFIN1                                 --------->MYB46(3)                                 <---------MYB111(2)                                 --------->DEAR3(1)                                 <---------MYB46(2)                                 <---------MYB111(1)                                 <---------MYB55(2)                                --------->ANAC46                          --------->ANAC46             --------->ANAC58   --------->ANAC58                      <-----------GT1             --------->ANAC58  ------>NtERF2                         <-----------GT1             ----------->GT1  <---------ALFIN1                   --------->AHL20(2)             --------->ANAC55(2)<---------ALFIN1                <---------YAB1          <-------TEIL             <---------ANAC55(2)--------->ANAC58              <--------HAHB4    --------->YAB1<------ZmHOX2a(1)       ---------->DOF2       --------->MYB46(3)              <---------YAB1    <------ZmHOX2a(2)    <-----------HVH21      --------->PCF2  --------->At4g35610--------->YAB1   ======================HOX2a_HOX2a   agtagatgtcaaagaacgtaattagagagtccccacccacctattagatgaaatcaaatttgtattattatttaacacacgatcaaaagtttcataggaa  15711100                                   --------->YAB1                                    <---------AHL20(2)                                   <--------ATHB1                                --------->YAB1                                   <---------ICU4                                --------->AHL20(2)                                   <------------ATHB5                            <---------AHL20(2)                                  <---------ATHB12                              <---------YAB1                            --------->YAB1                                    <--------HAHB4                           --------->KAN4(1)                                  <---------ICU4                           --------->ICU4                                    --------->ICU4                       ----------->GT1    ----------->HVH21                  <---------YAB1                <---------ZAT6    <---------ATHB51                         --------->YAB1                <---------ANAC46  --------->ICU4                       <---------ANAC58         <---------ANAC46 <---------KAN4(2)                            <---------ANAC58   <---------TOE2(3)<---------AtLEC2     XXXXXXXXXXXXXXXXXXXX>MIR3440B-3P <-------TEIL ---------->DOF2   gaatataggttgcatatagtgtgaatggaataatcaataatggactgaccaaaaaaaacatagattataacttacgttcataattatataaaagtattaa  15711200                                           --------->AHL20(2)                ------>MYB83               <---------AHL20(2)      ---------->ID1                ------>MYB46(1)           --------->YAB1      --------->GLK1(2)    --------->ZAT14              ------->GAMYB  <---------ANAC58                <---------GLK1(2)     <---------ZAT14             --------->MYB46(3)          <---------YAB1   --------->ANAC46     <-----------GT1             --------->DEAR3(2)     ----------->GT1  --------->ARR14(2)        --------->ZAT6           <-----------GT1   <---------ANAC58        <---------ARR14(2)      <-----------GT1      ---   acacttgaaattttaaccgactaagaaaaatgcttgttatgttataaaaatagcatatatacagaatttgttttttttttatcactacattgttttcatg  15711300  Previous    Next  AGI:  At5g39190.1    Description:  GLP2A (GERMIN-LIKE PROTEIN 2A); manganese ion binding / metal ion binding / nutrient reservoir. Identical to Germin-like protein subfamily 1 member 20 precursor (GLP5A) [Arabidopsis Thaliana] (GB:P92996;GB:Q39106); similar to germin-like protein (GLP2a) (GLP5a) [Arabidopsis thaliana] (TAIR:AT5G39160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17603.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Germin; (InterPro:IPR001929); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051) Range:  from: 15709819    to: 15710809    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version