Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <-------PIF5                                                    ------->PIF5                                                   --------->TGA1a    <------NtERF2                                         ------>ZmHOX2a(2)          <---------ANAC58                                        --------->GLK1(1)           <---------ANAC58                                        <------ZmHOX2a(2)           <---------ANAC46                                        <---------GLK1(1)     <-----------HVH21                                       <---------ARR14(2)  <---------ANAC58                       <---------------AGL15       <---------TGA1a <---------LBD16         ------>MYB83  --------->ANAC46<---------ARR11(3)  <---------ANAC58         ------>MYB46(1)               --------->ARR14(2)  <---------ANAC46        ----------->RAV1(1)            <---------AGP1      --------->ALFIN1                         -      --------->MYB46(3)               <-----------ARR10 <---------ANAC46             <---------ANAC46 --------ID1  <---------AHL20(2)       --------->ARR11(3)--------->ALFIN1   <-----------GT1       <--   gagacaaaaccaacatataatgttccctcaacaagaacaaggatctcagtggcacgagggtgtgtgtgaggcgggttttgaccatatggcgcatagtcta  15675400           --------->KAN4(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <---------KAN4(1)          --------->KAN4(1)                                 =========================================          <----------TaMYB80                                <---------TGA1a                      <---          <---------HSFB2a(1)                               ========================bZIP_DOF     <---          --------->HSFB2a(1)                           <-----------HVH21                        <---          <---------GLK1(1)                            <---------bZIP60(1)                      <----          --------->GLK1(1)                      <---------WRKY18(1)                            <----         --------->ARR11(3)               ------>ZmHOX2a(2) <---------O2                     <-------         <---------ARR11(3)               --------->ETT(2)  --------->TGA1a                  <-------         --------->ARR14(2)        --------->GLK1(2) <-------GAMYB                          <--------         <---------ARR14(2)       <---------GLK1(2)  =================MYC_MYB          --------->ARR14(2)        --------->YAB1         --------->LBD16  --------->WRKY38(1)      <---------DAG2<---------ARR14(2)      <---------TOE2(3)       <---------LBD16xxxxxxxxxxxxxxxx>smallRNA(se3)     <---------YAB1  <---- ------>NtERF2            <-----------GT1<---------WOX13(1) --------->O2 <----------DOF2    --------- -------->LBD16      ----------->GT1<---------At4g35610--------->bZIP60(1)   <---------YAB1------>ZmHOX2a(1) -------LBD16    ---------->DOF2 <xxxxxxxxxxxxxxxxsmallRNA(i)         <-----------GT1<---------MYB46(3)   tgcggaccaaggatattcccaaagtgtttaaccctggaatctgatcgacattgactgttgtcacgttggatttgactttattattagtggttcctgcttg  15675500   ------>NtERF2                               --------->AtLEC2 ====MYC_MYB                                 <---------ANAC58 ------ANAC58                                <---------ANAC58 ----GAMYB                                  ------>ZmHOX2a(2) ------ANAC58                   <---------ANAC58 --MYB46(1)                     <---------ANAC58          <---------YAB1 -----MYB46(3)        --------->At4g35610 --------->ARR14(2) --ANAC58         <---------ARR11(3)      <---------ARR14(2) --ANAC58         --------->ARR11(3) <----------DOF2     -------->P -ZAT2           <---------GLK1(1)  <---------ANAC58    <-----------GT1 --MYB83         --------->GLK1(1)  <---------ANAC58<-----------ARR10 >ZAT2      ---------->DOF2 <----------DOF2<------ZmHOX2a(2)                                ---------   gttgaggcctgagtaaaagaaatcttctgcctttgcttgctttggatccttgcaaaacttaccattcacaaaaactgcaagtagaaatattgaataaaaa  15675600                                              --------->ATHB51                                              --------->ATHB12                                              --------->YAB1                                              <--------ATHB1                                             <---------ATHB51                                             <---------ATHB12                                             --------->ICU4                                 ---------->DOF2                              --------->YAB1 --------->AHL20(2)                             <---------AHL20(2)  <---------AHL20(2)                             <---------YAB1  <---------YAB1                            <---------AHL20(1)-------->HAHB4                                        <                            --------->AHL20(2)<--------HAHB4                        --------->MYB46(3)        <-----------GT1     --------->AHL20(1)<---------ICU4                       -------->P       - >AHL20(2)            <-----------GT1      --------->YAB1                     <-----------GT1   <----   aaacctcttattacaacttccaatttacaatataataaaggagactaataattagttgagagttcaagaattcgagttttatacttaccaccatttttga  15675700                                                                                  <---------ICU4                                                                            ----------->GT1            --------->ANAC58                                               <---------TOE1(3)            --------->ANAC58                                               <---------TOE2(3)          ----------->RAV1(1)          --------->ATHB12                    --------->DAG2  <------NtERF2              --------->ZAT18                     ---------->DOF2  --------->YAB1 ---------ETT(2)---------->DOF2        <--------HAHB4           --------->AtMYB61--------->ICU4 -------->RAP2.6(2)          <---------ZAT18        ---------->DOF2    <---------RAP2.6(3)   <------- -----TOE2(3) --------->ANAC46        <------ZmHOX2a(2)        ----------------->AGL1<------ZmHOX2a(1)   ggtcgccaatggccacacaaaagtcttgaagtggacttggatcattagcttcggcaaaggaaatgaccaaagccgataaggtaatcaggatgagagactt  15675800                                                 --------->YAB1   <---------ANAC46                    --------->DAG2             <-----------TBP    <---------ANAC58                  ---------->DOF2  ------>ZmHOX2a(1)      ------->TEIL   <------------CBF          <-    --------->TOE2(3)     <---------YAB1      <----------DOF2<-----------RAV1(1)                 <--- ----------------TaNAC69(2)        <----------DOF2 <---------YAB1 <---------ANAC58         <---------ZAT14   ggaaaacctcattttcaaacaaaaggttatgctaatccttttttgagacttttataaatgtatgtgttgtttgtgaattgtgaagcatttgagtttagta  15675900                                         --------->ARR11(3)                                --------->ALFIN1                              <---------ANAC46                              <---------bZIP60(2)                              <---------ANAC58                              <---------TGA1a         <---------ARR11(3)                              --------->O2            --------->ARR11(3)                              <---------ANAC58        <---------ARR14(2)                        --------->ARR14(2)            --------->ARR14(2)           --------->DAG2     <---------O2<---------RVE1(1)          ---------->DOF2  ----------->HVH21  <-----------GT1                       --------->At4g35610          ==============================bZIP_DOF     <---------CCA1(2)              <---------At4g35610    <------ZmHOX2a(1)   <---------ARR14(2)<---------CCA1(1)                    --------->ALFIN1   <----------ID1    <---------ANAC58    --------->AHL20(1)                ---------->DOF2 --------AHL20(2)    <---------ANAC46    <---------ARR11(3)         <---------TOE2(2) --------TBP         <---------ANAC58    <---------AHL20(1)         <---------TOE1(2)             <--   tttataggacaaaaaagcgcatgtcgtatttgacgtggtccaagatattatctacatatcttgtaactcgcatgtttcaaagtggcagttcaaaaatgtt  15676000                                       <------------CBF                                     <---------AHL20(2)                                     --------->AHL20(2)                                     --------->AHL20(1)                      <---------ALFIN1                                <---------AHL20(2)                          <---------ZAT14                                <---------YAB1                              --------->SPL7                                --------->AHL20(2)                          --------->ZAT14                               --------->AHL20(2)                           <-------TEIL                               <---------AHL20(2)              <---------GLK1(2)                           <---------AHL20(2)    --------->ANAC55(2)     --------->LBD16     <-------                          --------->AHL20(1)     <---------AtLEC2   <-----------GT1         <--------                          <---------ARR11(3)    <xxxxxxxxxxxxxxxxxxsmallRNA(se3)            <--------                          <---------AHL20(1)   <-----------GT1 <---------ARR11(3)--------->LBD16                 ------------>CBF   <---------AHL20(2)  <---------ZAT14 --------->ANAC46    --------- ---------GT1   --------->TOE2(3)   --------->AHL20(2)  --------->ZAT14<---------LBD16 ------------>CBF   taacaagtctatcgataacttcaatctatatattttaattaaattggatttacatgactatactagattttaacccggtacaccgcgaaaacaatttttt  15676100                                                                                                 <xxx                                                                                                 xxxx                                                                                               <xxxxx                                                                                             xxxxxxxx                                                                                             <xxxxxxx                                                                                             xxxxxxxx                                                                                            <xxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                   --------->MYB52(1)                                                                                   <-----------GT1                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                      <---------AHL20(2)       xxxxxxxxxxxxxxxxxxxxxx                                                --------->AHL20(2)            xxxxxxxxxxxxxxxxxxxxxxx                                                <---------AHL20(2)           xxxxxxxxxxxxxxxx>smallRNA(i)                                               --------->AHL20(2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                               <---------AHL20(2)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                            <---------AHL20(2)              xxxxxxxxxxxxxxxx>smallRNA(s)                                            --------->AHL20(2)              xxxxxxxxxxxxxxxx>smallRNA(i)  <---------AHL20(2)                     --------->YAB1                   <---------YAB1  ------>ZmHOX2a(1)  --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) --AHL20(2)        xxxxxxxxxxxxxxxx>smallRNA(i)<---------AHL20(1)<---------ZAT14<---------ANAC55(2) -AHL20(1)        ---------->DOF2<---------CCA1(2)   <---------YAB1  <-----------RAV1(1) xxxxxxxxxxxx -AHL20(2)      <---------AHL20(2)--------->ARR11(3)<---------AHL20(2) <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) >AHL20(2)  <-----------TBP    --------->AHL20(2) <---------YAB1 --------->ZAT14--------->ANAC55(2)   ttttttaaatcagtatatataaaagtttgcaaattatatctatttataaattatttttattttatagtttactgttgttattaagtaacgtccttccaaa  15676200                  --------->ANAC55(2)             --------->ANAC46            <xxxxxxxxxxxxxxxxsmallRNA(i)           <xxxxxxxxxxxxxxxxsmallRNA(s)         <---------ALFIN1         <xxxxxxxxxxxxxxxxsmallRNA(s)        <xxxxxxxxxxxxxxxxsmallRNA(s)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <xxxxxxxxxxxxxxxxsmallRNA(s)      <xxxxxxxxxxxxxxxxsmallRNA(i)     --------->LBD16     ------>NtERF2----------->GT1    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxxxxxxxxxxsmallRNA(s)   xxxxxxxxxxxxxxxx>smallRNA(se3)  --------->SPL7  <---------ANAC46  <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------ARR14(2) --------->ARR14(2) <---------MYB52(1) xxxxxxxxxxxxxsmallRNA(s)                                         --------->AHL20(2) xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                          <---------YAB1 xxxxxxxxxxxxxxxxxsmallRNA(si3)                             ----------->GT1 xxxxxxxxxxxxxxx>smallRNA(le3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxsmallRNA(se3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxx>smallRNA(i)                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxsmallRNA(s)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xx>smallRNA(s) <xxxxxxxxxxxxxxxxsmallRNA(i)             <---------AHL20(2) xxxxxxxxxsmallRNA(si3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <XXXXXXXXXXXXXXXXXXX xxxxsmallRNA(si3)<---------ANAC55(2)--------->ZAT14  <---------AHL20(1)      --------->LBD16 xxxx>smallRNA(fl3)                  <---------ZAT14  --------->AHL20(1)     <---------ANAC55(2) xxxx>smallRNA(le3)--------->LBD16  <xxxxxxxxxxxxxxxxsmallRNA(s)  <---------AHL20(2)     --------->YAB1 xsmallRNA(i2)<-----------HVH21 --------->LBD16      --------->AHL20(2)      --------->ANAC55(2) >smallRNA(si3) --------->SPL7  --------->ZAT14  --------->AHL20(2)         <---------LBD16 >smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(s)<---------MYB52(1)--------->YAB1<-----------GT1 xxxxxxxx>smallRNA(si3)       <---------LBD16    <---------AHL20(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   cccgttccgccaaacccgtcccgtaaaaaaactccgcagtacaccgctaatttaaatatataatgaaaataaatgttttacgggattgcaattgtatttt  15676300  Previous    Next  AGI:  At5g39110.1    Description:  germin-like protein, putative. Identical to Germin-like protein subfamily 1 member 14 precursor [Arabidopsis Thaliana] (GB:Q9FID0); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17603.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Germin; (InterPro:IPR001929); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051) Range:  from: 15675030    to: 15675812    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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