Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                          <---------GLK1(1)                                          --------->GLK1(1)           <---------ANAC46                                         <-----------ARR10            <---------ANAC58                                         <---------AGP1          ----------->HVH21                                         --------->ARR11(3)      --------->ALFIN1                                         --------->ARR14(2)     <-----------HVH21                                         <---------ARR11(3)    --------->ALFIN1                                         <---------ARR14(2)  <---------ANAC55(1)                                      --------->ANAC58       <---------ANAC58                  <---------TOE2(3)   --------->ANAC58       <---------ANAC46           ------>MYB46(1)        ===============HOX2a_HOX2a<-------TEIL<------NtERF2          ----------->RAV1(1)     ================HOX2a_HOX2a<---------ANAC58        --------->MYB46(3)        <------ZmHOX2a(1)        --------->ALFIN1    ---------->ID1       < ----------ID1   <-----------GT1 <----------ID1       ------->PIF5    <---------ANAC58   <-------TEIL --WOX13(1)------>MYB83   <---------------------WRI1  <-------PIF5   <---------LBD16 <-----------RAV1(1)   aagagacaaaaccaacatataacgttccctcgataaggacaaggatctcagtagcacgagggtgcgtgtgaggcgggttttgtccatatggtgcatagtc  15670800                                                                      ==============================HOX2a_HOX2a                                                                     --------->At4g35610             --------->KAN4(2)                                      <---------ARR14(2)            <---------KAN4(1)                                       --------->ARR14(2)            --------->GLK1(1)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)            <---------GLK1(1)                                 ========================bZIP_DOF            <---------HSFB2a(1)                               --------->O2            --------->HSFB2a(1)                               <---------TGA1a            <----------TaMYB80                            <-----------HVH21<----------DOF2            --------->KAN4(1)                      <---------WRKY18(1)------>ZmHOX2a(2)           <---------ARR14(2)                <---------DDF1   =======================================           --------->ARR11(3)               <---------ETT(2)  --------->TGA1a           <---------ARR11(3)        <---------ARR14(2)  <---------bZIP60(1)           --------->ARR14(2)        --------->GLK1(2)   --------->bZIP60(1)          --------->YAB1            <---------GLK1(2)  <-------GAMYB<---------AGP1      <---------ANAC58        <---------TOE2(3)        --------->LBD16  --------->WRKY38(1)<---------At4g35610<---------ANAC58   ------>NtERF2                <---------LBD16xxxxxxxxxxxxxxxx>smallRNA(se3)     <---------YAB1  --------->LBD16           <-----------GT1 --------->ETT(2)  <---------O2 <---------DAG2           < ---------LBD16        <---------ZAT6--------->ARR14(2)=================MYC_MYB<---------YAB1------>ZmHOX2a(1)   tatgcggaccaaggatattcccatagtgtttaaccctggaatctggtcgacattgactgttgtcacgttggatctgactttattattagtgcttcctgcc  15670900                                                         <----------DOF2                                                        <---------HSFB2a(1)                                                ------>ZmHOX2a(1)                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                                            --------->ARR14(2)                               <-------                                            <---------ARR14(2)                            <---------AHL20(2)                                            --------->ARR11(3) --------->AtLEC2           <---------ICU4                                      <---------ANAC46  --------->HSFC1(2)               --------->AHL20(2)                                      <---------ANAC58  <---------HSFC1(2)          <----------DOF2     ------>NtERF2   -------->ATHB1   <---------ANAC58  --------->HSFB2a(1)        --------->TOE2(3) ========MYC_MYB    --------->ICU4<---------ANAC58 <---------HSFB2a(2)     --------->At5g28300 --------P     >>>>>>>>>TBF1      <---------ANAC58 --------->HSFB2a(2)    ----------->GT1<---------AHL20(2)   tggttgaggcctgagaagaagaattattctgccttcgcttgcttgggatccttacagaactttccattcacaaaaactgtaaaaacctttatttattaca  15671000                                                                     --------->AtMYB61                 ---------->DOF2                                     <---------ALFIN1                --------->ICU4                                       --------->DEAR3(1)           ----------->GT1                                          --------->MYB46(3)       <---------AHL20(2)                                         --------->ANAC46       <---------YAB1                                           --------->ANAC58      <---------AHL20(1)         <---------ICU4                 --------->ANAC58      --------->AHL20(1)        --------->ICU4                  --------->ANAC46                <----      --------->AHL20(2)    --------->At5g28300    ----------------------->TaNAC69(2)         -------     --------->YAB1        ----------->GT1        --------->GLK1(2)------->TEIL       <---------YAB1 ----GT1   --------->YAB1<---------ZAT14 <---------ZAT6       <-----------GT1   <---------TOE2(3)   acttcaaatataatcgtaataaaggagaacagtaattagtagagagttagagaatttgagttttatacgcaccaccatttttgaggtcatcaatggccac  15671100                                                                  <---------ICU4                                                            ----------->GT1                                                           --------->DAG2   <---------ARR11(3)                            ---------->DOF2  --------->YAB1   --------->ARR11(3)               ---------->DOF2        <---------TOE2(3)  <---------GLK1(1)    --------->YAB1           --------->AtMYB61--------->ICU4  --------->GLK1(1)   <------ZmHOX2a(2)        ----------------->AGL1<------ZmHOX2a(1) -----ALFIN1 --------->ZAT18      <---------At4g35610      <---------TOE1(3)        --------->GLK1(1) ---->RAV1(1)<---------ZAT18      --------->At4g35610  <---------RAP2.6(3)          <---------GLK1(1)   acagaaatcttgaagtggacttggatcataagcttcagcaaaggaaatgaccaaagccgataaggtaatcaggatgagagacttggaaaccctcattttg  15671200                   <----------DOF2                  <---------ANAC58        <---------GLK1(1)        --------->GLK1(1)        --------->CCA1(2)        <----------TaMYB80       ---------->TaMYB80                         <---------ANAC58                           --------       --------->ARR14(2)                         <---------ANAC58                 <---------AHL20(2)       <---------ARR14(2)                         <---------ANAC46               <-----------TBP  --------->MYB52(1)          <----------DOF2   *TSS     <------------CBF--------->At4g35610--------- ---------->DOF2  <---------ANAC58            <-------GAMYB              <---------At4g35610=========   aaacaaagggatatgctaatgcttttcaaagacttttatatgtgtgtgtgttgtttgtgaattgtgaagcatttgagctcagtatttatagggcaaaagc  15671300                         <---------RVE1(1)                         <---------CCA1(1)                        <---------ARR11(3)              --------->ALFIN1            <---------ANAC46                                                                       --            <---------ANAC58                                                                      ---            <---------ANAC58                                                                      <--            --------->O2--------->ARR14(2)                                                      <----            <---------TGA1a                                                                     -----            <---------bZIP60(2)     >>>>>>>>>EIN3                                            --------     --------->ICU4    --------->YAB1<------------CBF         --------->DAG2                 <------- ->DAG2     <---------O2--------->ARR11(3)                   ---------->DOF2                <-------- ->DOF2  ----------->HVH21 --------->GLK1(2) <---------AHL20(2)     <-----------GT1  <---------bZIP60(1) =====================bZIP_DOF     <-------TEIL<------------CBF----------->GT1       --------->bZIP60(1)   gcatgtcatatttgacgtggtccaaagatattctatatacattgttttaaattggcagtttaaaaaagtttaacaagtctatcgatgacttcatatatct  15671400    <---------YAB1                                           <---------YAB1  --------->AHL20(2)                                       <---------AHL20(2)  --------->YAB1                                          <---------AHL20(2) <---------YAB1                                           <---------AHL20(1) ------->YAB1                         --------->ANAC58    --------->AHL20(2) ------>AHL20(2)          --------->AHL20(2)           --------->AHL20(2) -------AHL20(2)          <---------AHL20(2)           <---------AHL20(2)           <---------ZAT2 ------DOF2     <---------AtLEC2      --------->MYB46(3)  --------->AHL20(1)      ------>ZmHOX2a(1) ---->TOE2(3)   <---------ANAC58      --------->ANAC58--------->AHL20(2)    --------->HSFC1(2) ->ARR11(3)     <---------ANAC58 --------->ANAC58     <---------AHL20(2)    <---------HSFB2a(1) --ARR11(3)--------->ARR14(2)    --------->ANAC58    <---------AHL20(2)     <---------HSFC1(2) -CCA1(2)  <---------ARR14(2)  ---------->DOF2      --------->YAB1          --------->HSFB2a(1)<-----   ttaattataaatggatttgcatgcctatataaataaagccacgaccagagcttatattaatttattctagatttaagaagtttcctagctgttttgcagt  15671500                                             ---------->DOF2           --------->AHL20(2)                                         <----------ID1                <---------AHL20(2)                  <---------ANAC58     ---------->DOF2      <---------ANAC58    --------->ANAC58                  <---------ANAC58<----------ID1            <---------ANAC58    --------->ANAC46    -                  <---------ANAC46----------->GT1           <---------ANAC46    --------->ANAC58  <--         --------->HSFB2a(2)     ------------------------>ANAC81       --------->AHL20(1)         --- --GAMYB <---------HSFB2a(2)    ---------->DOF2   ---------->DOF2     --------->AHL20(2)  <------ZmHOX2a(2)   tggaaccatgcctagaaatgacttgttcaaaaaaaaaagaaaaaagaaaaagaaaagaaatgacttgttcaaattaattaacaaggaatcggatcaactt  15671600                                                --------->ARR14(2)                                                <---------ARR11(3)                                                <---------ARR14(2)                                                <---------ARR11(1)                                                <-----------ARR10   <---------bZIP60(2)                    --------->ANAC58   <---------ANAC58                       --------->ANAC58   <---------ANAC58                     ---------->DOF2   <---------ANAC46                  ---------->DOF2                                  --------->DAG2 ---------->HVH21                  <------NtERF2--------->ARR11(3)           <-------TEIL -------ANAC55(2)                --------->ALFIN1      --------->LBD16   <---------ICU4----------->GT1 ------>ANAC55(2)              --------->ALFIN1<---------CCA1(2) --------->ZAT14     ---------->DOF2   aagtgacttggagactaccatacacaaattgaagggtggcaaagaagccatatcttccccaaatcagagaactcatagttacatccaaaaagttaacatg  15671700  Previous    Next  AGI:  At5g39100.1    Description:  GLP6 (GERMIN-LIKE PROTEIN 6); manganese ion binding / metal ion binding / nutrient reservoir. Identical to Germin-like protein subfamily 1 member 13 precursor (GLP6) [Arabidopsis Thaliana] (GB:P92997); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39150.1); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39110.1); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39120.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74480.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); c Range:  from: 15670318    to: 15671248    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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