Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------TOE2(3)                                                                               <---------YAB1                                                                             --------->AHL20(2)        <----------DOF2                                 --------->ZAT6       <---------AHL20(2)   <----------DOF2        <---------GLK1(2)<----------DOF2                  <---------AHL20(2) -----------GT1     <---------AHL20(2)     --------->TOE2(3)            --------->YAB1<------ZmHOX2a(1) ---AHL20(2)       <---------AHL20(2)   <---------ARR11(3)             <---------ATHB12 -->AHL20(2)       --------->AHL20(2)   --------->ARR11(3)   ------>MYB46(1)--------->AHL20(2) ---->AGL15 <---------AtLEC2            <---------AHL20(1)   ------>MYB83   <---------AHL20(1)   ataaacttttctttacatgaataaaattgattctctaaacaatatctttaaaacgataacaccaacttatctaatcaaattatttttaggaatacaattt  15660400                                       <------MYB83        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       <------MYB46(1)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       <---------MYB46(3) <---------ARR11(3)                                      <---------AtMYB61   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                   --------->ATHB12       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                 <---------WOX13(1)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                 xxxxxxxxxxxxxxxx>smallRNA(i)                               --------->ATHB12          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                              <---------YAB1             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                              xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                             --------->At5g28300         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                             xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             --------->LBD16            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                            <---------ANAC46           <---------TOE2(3)              ------->GAMYB                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   --------->MYB52(1)                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <---------ATHB12                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->TOE1(3) --------->ANAC58                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    --------->TOE2(3) --------->ANAC58                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         --------->ANAC46<---------WOX13(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 ---------->DOF2<xxxxxxxxxxxxxxxxsmallRNA(i)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)               xxxxxxxxxxxxxxxx>smallRNA(i)            <---------TOE1(3)       ------>MYB46(1)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           <---------YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxx>smallRNA(se3)         --------->YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <---------YAB1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------ARR11(3)---------->DOF2--------->MYB59 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     --------->ARR11(3)<---------DOF5.7(2)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->ANAC46 <---------At4g35610 --------->DOF5.7(2)<-------GAMYB --------->MYB52(1)       ------>MYB83         < --------->At4g35610 <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->TOE2(3)      <-----------GT1       <----   gtgagatgatattataactgaaagttaacgccgtgattgtttggttgacgaaaacttaacgatattatgccttaaataaccaaatcaacgaaacttgatc  15660500                                                                                     <---------DAG2                                                                                     <----------DOF2                                                                        --------->AHL20(2)          <                              --------->AHL20(2)                        <---------AHL20(2)         <-                              <---------AHL20(2)                       --------->AHL20(2)<-----------GT1      ---------->DOF2     --------->ATHB12                   <---------ANAC58  --------------->AtSPL3    --------->YAB1       <---------YAB1                      <---------ANAC58  <-------TEIL   <------ ---------AHL20(2)   <---------DAG2                        <-----------GT1     --------------->AtSPL8 -----ICU4           <----------DOF2            ----------------------->TaNAC69(2) <---------TOE1(2)-   attttatcaaaagtcaaactaaactttatgatttaaatgatttttcgaaagtttatgtttttttcgtctcaaatttaaaaattcgtacttttttcgatat  15660600                       --------->TOE2(3)                                         <---------ANAC58                       <----------DOF2                                           <---------ANAC58       --------->AHL20(2)                                                     <---------WOX13(1)       <---------AHL20(2)     <---------AHL20(2)  <---------MYB52(1)         >>>>>>>>>ARR2        <--      --------->AHL20(2) --------->AHL20(2) <---------REM1(2)              <---------AHL20(2)     <--   ------>ZmHOX2a(1)   --------->TOE1(3)  <---------WRKY38(1)         --------->AHL20(1)          --- -----------GT1   --------->AHL20(2)  --------->DAG2                  <---------AHL20(1)          --- ----------GT1    <---------AHL20(2) ---------->DOF2                  <---------AHL20(2)         <--- ---RVE1(1)<-----------GT1   <---------AHL20(2)  --------->At5g28300  --------->AHL20(2)       ------ --------->ID1<---------YAB1 --------->AHL20(2) ----------->GT1      --------->AHL20(2)     ---------   ttttcctatttattttctaattaaactttaaataaatgaaaaagtcaacacagttaattctctctcttcaattttatttgattgtttgtctaaatctcaa  15660700                                            <---------AHL20(2)                                            --------->AHL20(1)                                            <---------AHL20(1)                                           --------->AHL20(2)        <---------ICU4                                          <---------YAB1            <---------YAB1                                        <---------ICU4            --------->YAB1                                        <--------HAHB4            <---------ICU4                                        --------->YAB1           --------->ICU4                 -----                                       <---------YAB1          --------->YAB1                  <-----                                     --------->YAB1           <---------YAB1                  <------                                     <---------ICU4          <---------AHL20(2)               -------                                    <---------YAB1           --------->AHL20(2)              <-------                                    --------->ICU4          --------->YAB1                   -------- -------ICU4                      <---------ICU4           <---------YAB1                    -------- ------HAHB4                      --------->YAB1       <---------ANAC55(2)                  --------- ------>YAB1                     <---------YAB1        <---------ANAC46                     <-------- ------>ATHB12                   <---------AHL20(2)    --------->ANAC55(2)                --------->YAB1 ------ATHB12                  --------->YAB1          <---------ANAC58                  <---------AHL20(2) --->WOX13(1)                 --------->AHL20(2)       <---------ANAC58              <-----------TBP >TOE2(3)                     <---------AHL20(2)       <---------ANAC55(1)           --------->AHL20(2)   tcatttcaaatgttagtaaatgttagtcaaaatttataattatcattatattcacttacgtattataatcatcattttccttcgagtttatataatgatc  15660800                                                                        <-----------HVH21                                                                     <---------TGA1a                                                                     --------->TGA1a                                                                     --------->O2                                                                     <---------O2                                                                  ----------->HVH21                                                               ------->MYC2                                                               <-------MYC2                                                               <-------PIF5                                                               ------->MYC3 --------->ANAC58                                                               ------->PIF5 <---------ANAC55(2)     -    <---------WRKY38(1)                                        <-------MYC3 --------->ANAC55(2)     -  <-----------HVH21                                            <-------MYC4 --------->ANAC58       -- ---->YAB1                                                     ------->MYC4 --------->bZIP60(1)    <- ----YAB1                                                     --------->ANAC55(2)                  -- ---ARR11(3)                                                  --------->ANAC46                    <-- -->ARR11(3)                                                  --------->O2  <---------bZIP60(1)   --- --ICU4                                           --------->ZAT14<-----------HVH21                <-- ->YAB1                        *TSS           --------->ZAT6  --------->TGA1a                     <-- >HAHB4              <----------DOF2       --------->WOX13(1) <---------TGA1a                     <-- >ICU4               ------>ZmHOX2a(1)  ------->TEIL          <---------O2  --------->ANAC46     <--- -YAB1             <---------ICU4--------->AHL20(2)         <---------ALFIN1--------->bZIP60(2)<-----   atatggtcaccgagaaaataatcctttctcaccaaaaaaatgaatccatcactaaacttcatccacgtgtcacgagtcacgccatcaaactctaactcgt  15660900  <------NtERF2 <-----------TGA1 <-----------HVH21 ------>NtERF2 -------->bZIP60(1) -------->ANAC46 ------->RAP2.3(1) -----NtERF2                                                                               ---------- ------->ATERF1(1)                                                                   --------->At1g77200 -------ATERF1(1)                                                                    --------->DREB2C(2) --->NtERF2                 --------->WRKY38(1)                                      --------->DEAR3(1) -------DEAR3(2)            --------->WRKY12               <---------SPL7           --------->MYB46(3) -------ORA47(2)          <----------DOF2                <------NtERF2              --------->DEAR3(2) -------RAP2.3(1)     <----------DOF2                   <-----------HVH21 --------->HSFB2a(2) ------DEAR3(1) --------->At4g35610                    --------->DEAR3(1) <---------HSFB2a(2)       < ------HVH21    <---------At4g35610               ---------->DOF2    <---------At4g35610<---------ANAC46   cggcgtcactcactctcccgctcactttctttgaccttctctggctcaaacacaaagccgtcgaacgagtcatcttctacaaactcaccgacgtaaatcg  15661000                                                                             <------NtERF2                                                                            --------->LBD16                                                                            --------->ORA47(1)                                                                            ------>NtERF2                                                                           --------->ATERF1(2)                                                                           --------->DEAR3(1)                            --------->TOE2(3)                              <---------ATERF1(2)                            --------->TOE1(3)                             --------->ATERF1(1)  <-----                          ------>MYB83                                   <---------ATERF1(1)  -------                          ------>MYB46(1)                              --------->MYB46(3)   ---------                          -------->P ------>ZmHOX2a(1)                <---------ALFIN1----------->RAV1(2)                         <---------ALFIN1                           <---------ALFIN1  --------->At4g35610                        <---------ALFIN1      ------>ZmHOX2a(1)   ------>MYB83    <---------ARR11(3) >DOF2             <---------SPL7--------->ARR14(2)               ------>MYB46(1)<---------CCA1(2) ----------DOF2--------->YAB1    <---------ARR14(2)       --------->ZAT6--------->ANAC46--------->HSFB2a(2)   ctctttattcgactcagtcatcgtccccaacctcaaatcctctctctcctcatccctctctcactacctcccactcgccggccatatcatctgggaacca  15661100                                     <------NtERF2                                    ------>NtERF2                                   <---------DEAR3(1)                                   --------->DEAR3(1)                                   --------->ANAC46                                    --------->LBD16                           --------->ANAC46                                          <---------LBD16                         --------->ANAC58             <---------At4g35610      <----------DOF2                         --------->ANAC58             --------->ZAT2       ---------->ID1       <----   ------>ZmHOX2a(2)   --------->REM1(1)              <---------ZAT2   --------->GLK1(1)        ----- ----ALFIN1            <---------ALFIN1               --------->At4g35610 <-----------GT1      ------ -->MYB46(3)          <---------REM1(2) <---------MYB52(1)        <---------LBD16  <-----------GT1 >PCF2    ----------->GT1--------->ANAC46       <---------At5g28300    <---------GLK1(1)  ---------->DOF2   catgatccaaaaccgaaaatcgtctacacccaaaacgacgccgtttcattcaccgtagctgagtcaaactcggatttctcccttttaaccggaaaagaac  15661200                                                                     <---------ANAC46                                                                     <---------ANAC58                                                           --------->At4g35610     <---------MYB52(1)                                                           --------->ZAT2        --------->ANAC58                                                           <---------At4g35610   --------->O2                                                          ----------->RAV1(1)    ----------->GT1                   --------->ANAC58                     <---------At4g35610      --------->ANAC55(2)      --------->MYB46(3)       --------->LBD16          --------->At4g35610 --------->ANAC46     ------>ZmHOX2a(1)        --------->LBD16           <---------ZAT2      --------->ANAC58    --------->ANAC46         <---------LBD16            --------->ZAT2      --------->ANAC58    ----- -----HSFB2a(1)    --------->ANAC58               ------>NtERF2      <---------ANAC58  <-----------GT1 ---->HSFB2a(1)    --------->ANAC46            ------>NtERF2    <---------ANAC58 <---------ANAC55(2) ->TEIL<---------ALFIN1<---------MYB52(1)     --------->DEAR3(1)<---------ANAC58 --------->ANAC58   ctttctcctccaccgagttacacccattagtcccggagttacaaaactccgacgactcagcagcagtcgtgtcgtttcaagtcacgttatttccaaacca  15661300  Previous    Next  AGI:  At5g39080.1    Description:  transferase family protein. similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G39090.1); similar to malonyl-CoA:isoflavone 7-O-glucoside-6''-O-malonyltransferase [Glycine max] (GB:BAF73620.1); contains InterPro domain Transferase (InterPro:IPR003480) Range:  from: 15658886    to: 15660389    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g39090.1    Description:  transferase family protein. similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G39080.1); similar to malonyl-CoA:isoflavone 7-O-glucoside-6''-O-malonyltransferase [Glycine max] (GB:BAF73620.1); contains InterPro domain Transferase (InterPro:IPR003480) Range:  from: 15660831    to: 15662344    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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