Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------ARR11(3)                                  <<<<<<<ZML2                               <---------HSFB2a(2)           --------->ANAC46                               --------->HSFB2a(2)    <---------ICU4                               --        <----------DOF2        --------->HSFC1(1)    <-------TEIL                                ----       <---------ICU4     <-------TEIL       <-------TEIL --------->ZAT14                        ----     --------->GLK1(2)--------->DAG2    <---------HSFB2a(2)  --------->ANAC58                    <--- ---------->GT1      ---------->DOF2    --------->HSFB2a(2)  --------->ANAC58                  <-----   aatggataatctttattcacataaaaagttcatctagaacttctagattcaaaaattcattacactcaaaaactgaacaaaaacatgctcttcaatatca  15592400                       <---------ICU4                       --------->ATHB51                      <---------YAB1          <---------ZAT18          <---------ZAT14                     --------->At4g35610          --------->ZAT18                  <------ZmHOX2a(2)        --------------->AtSPL8            <---------ARR11(3)     ---------->DOF2--------->ANAC55(2)   --------->ARR11(3)               --------->ATHB12 <------NtERF2      <---------ANAC55(2)  <------ZmHOX2a(1)                <---------YAB1 ------->ALFIN1   <-----------GT1 <------ZmHOX2a(2)                       <---------TOE2(3) ----->At4g35610  --------->AHL20(2) ---------->DOF2                  --------->TOE2(3) ----->ZAT2    <---------ICU4     ==============HOX2a_HOX2a         --------->GLK1(2) ------O2 --------->ZAT14       --------->At4g35610                 <---------ARR11(3)     <---------ARR11(3) ------RAV1(2)--------->ICU4    <---------At4g35610                 --------->ARR11(3)    <------ZmHOX2a(1)   ggtggctcaaagtgtactaattacataattgttcagatcaaaaggatcatctcaaaacttgcctctgaaaaatcttaagattggactcttcaggattttt  15592500                                           ------>MYB83                                           ------>MYB46(1)                                         <---------MYB111(2)                                    -----                                         --------->AtMYB61                                      -----                                         <---------MYB46(2)                         <----------DOF2                                        --------->ANAC46                         --------->ARR11(3)                                        --------->ANAC58                         <---------ARR11(1)                           <---------WOX13(1)                               <-----------HVH21   -----                        <---------YAB1  --------->ANAC58               <---------GLK1(2)        -----                     ------->TEIL     --------->REM1(1)      <---------MYB52(1) <---------CCA1(2)                  <---------YAB1    ----------->RAV1(1)  -------->P  <---------YAB1 --------->TOE2(3)   gaactcatagacaaaaacttatgaatttgattaatctgcaacaccaaactctctaaatcaacccttattttctgattctgtcaaatctttaatcaaacac  15592600                                              --------->ZAT6                                             <---------TOE2(3)                                             <---------TOE1(3)                                            <---------DOF5.7(2)                                          --------->DOF5.7(2)  ----------->GT1                 --------->CCA1(2) ---->ANAC55(1)                --------->ANAC58 ---->ANAC58           <---------GLK1(2) <----------DOF2                     <---------YAB1  -------- ---->ANAC58  --------->ZAT6   --------->ANAC46                 <---------AtLEC2             -------- ---->ANAC46  <---------ALFIN1 --------->ANAC58     ---------->DOF2      <----------DOF2  --------->YAB1   gaaattgaaaaattcaacacttcaaaattctccaagaaatgagctttaacgctaaaaagtttgtttggatgaaaactttctgattagaagaacaataata  15592700                                                                                                  ---                                                                                                  ---                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----  --------->ICU4                                      <---------AHL20(2)                        -----  <---------YAB1                          <---------YAB1<---------TOE2(3)                <------ZmHOX2a(1)  ------>ZmHOX2a(1)                     --------->CCA1(2)      <----------DOF2           ============ <---------MYB59                      --------->YAB1 <---------AHL20(2)          --------->ATHB12<--- ->YAB1                              <---------YAB1  --------->AHL20(2) <---------LBD16  ============ ->AHL20(2)                          --------->ICU4  --------->AHL20(1)----------->RAV1(2)      -----   tgtcctaattgtacaaaactaagcatatgtgtaagtgtaatgatatgatcaaaaatttaatgtttctttgtttacctggaaaaagattggaggaagaaga  15592800      --------->TOE2(3) -------->GT1<---------AHL20(2)                 --------->ANAC46 --->ZmHOX2a(2)                                 *TSS        <---------ATHB12 -----ARR14(2)                                  --------->ANAC55(1) -----ARR14(3)                                  --------->YAB1 --------->AtLEC2 -----ARR11(3)                           --------->ARR14(2) --------->MYB46(3) ---->ARR14(2)                       ---------->DOF2     --------->AtMYB61 ---->ARR11(3)            ----------->GT1<---------ARR14(2)-------->P ====HOX2a_HOX2a          --------->ANAC58 <-------TEIL  --------->MYB46(3)                        <- ---ZmHOX2a(2)            --------->ANAC58--------->CCA1(2)------>MYB46(1)                    <------ ===HOX2a_HOX2a       --------->CCA1(2)  --------->ARR11(3)------>MYB83              <----------DOF2 ---->ARR14(3)--------->MYB52(1)   --------->YAB1  <---------ICU4     <---------YAB1 <---------DAG2<-   tcgtgaaacctctaattaatggagagacaagtcaaaatcaaaagatacacacataatgaccaaccatgcacgatgatatatcccaaacttttccattttt  15592900                                                  <---------ANAC58                                                  <---------ANAC58                                    --------->ARR11(3)                <---------ATHB12 --------->AHL20(1)                                    <---------ARR11(3)          <---------WRKY18(1)    --------->ARR11(3)                                    --------->AHL20(1)          >>>>>>>>>>WRKY40       <---------ARR11(3)                                  <---------ARR11(3)            >>>>>>>>>>WRKY62       <---------AHL20(1)          <----------DOF2         <---------AHL20(1)            >>>>>>>>>>WRKY18     <---------ARR11(3)      <---------ARR14(2) --------->LBD16<-----------GT1        --------->WRKY38(1)   <---------AHL20(1)      --------->ARR14(2)<---------ANAC55(2)  <---------ICU4    --------->WRKY12      --------->AHL20(1) --------ANAC58     <-----------GT1 <---------AHL20(1)         --------->WRKY45      --------->ARR11(3) ---AHL20(2)--------->WRKY45      --------->ARR11(3)     --------->ARR14(2) --------->LBD16<--------- --------ANAC58  --------->YAB1   --------->AHL20(1)     <---------ARR14(2)<---------ANAC55(2)  <----   ttcttgcatatactttgactaataacccgtatgaaaaatatttttcaacatttcttgcatatactttgaccaataacccgtatgaaaaatatttttcaac  15593000                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                  <--                                                                                               <-----                                                                                            ---------                                                                                            <--------                                                                                         <---------MYB52(1)                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       *TSSxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                   <---------ICU4                                      xxxxxxxxxxxxxx                                 <---------AHL20(2)                                    xxxxxxxxxxxxxx                                --------->YAB1                                         xxxxxxxxxxxxxx                       <--------ATHB1           --------->ICU4                         xxxxxxxxxxxxxx                       <---------ICU4<---------YAB1                                    xxxxxxxxxxxxxx                       --------->ATHB51       ---------->DOF2                          xxxxxxxxxxxxxx                       --------->AHL20(2)    --------->AHL20(2)                        xxxxxxxxxxxxxx                       <---------AHL20(2)    <---------AHL20(2)                        xxxxxxxxxxxxxx         <----------DOF2   ----------->GT1  <---------AHL20(2)                         xxxxxxxxxxxxxx <---------ANAC58     <---------ATHB12  <---------YAB1                                 xxxxxxxxxxxxxx <---------ANAC58     --------->ICU4 ----------->GT1         <---------YAB1            xxxxxxxxxxxxxx --GT1------->TEIL    <---------ATHB51--------->YAB1      --------->ICU4               xxxxxxxxxxxxxx -----ICU4          --------->YAB1 --------->YAB1    ----------->GT1             xxxxxxxxxxxxxxxx>smallRNA(s)   atttcttgcatcttttttggactaataatttgtataaaaatgataatttaaagattagtaaatatgattttagttttgtagcaaatggcccattagctca  15593100           <---------ANAC46    xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <-------GAMYB ------MYB83 ------MYB46(1) ---------MYB46(3) -------MYB52(1) ------RAV1(2) >At4g35610<---------ANAC58 -At4g35610<---------ANAC58 xxx>smallRNA(s) xxx>smallRNA(fl3) xx>smallRNA(fl3) xxxxxxx>smallRNA(fl3) x>smallRNA(fl3) xxxx>smallRNA(fl3) xxx>smallRNA(fl3) xxxxxxxxxx>smallRNA(fl3) xxxxxxxxx>smallRNA(fl3) xx>smallRNA(i) xx>smallRNA(s) xxxxxx>smallRNA(i2)                        xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxx>smallRNA(s2)                     xxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxx>smallRNA(i2)                      xxxxxxxxxxxxxxxx>smallRNA(s) xxxxx>smallRNA(fl3)                      xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxx>smallRNA(fl3)                 xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxx>smallRNA(fl3)              xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxx>smallRNA(se3)                 xxxxxxxxxxxxxxxx>smallRNA(i) xx>smallRNA(se3)                      xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2) xxxxxxx>smallRNA(se3)                <-------TEIL x>smallRNA(se3)                      xxxxxxxxxxxxxxxx>smallRNA(s) xxxxx>smallRNA(se3)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxx>smallRNA(si3)                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) x>smallRNA(si3)                   <---------HSFB2a(1) xxxxxxxxx>smallRNA(si3)           --------->HSFB2a(1) xxxxxxxxxxx>smallRNA(se3)        <---------TOE1(2)                    <----------DOF2 xxxx>smallRNA(se3)               <---------TOE2(2)                 <---------ARR11(3) xxx>smallRNA(se3)               <-----------RAV1(2)                --------->ARR11(3) xxxxxxxxx>smallRNA(se3)     <-----------HVH21  <---------AtLEC2   <---------CCA1(2) xxxxxxxxxx>smallRNA(se3)   xxxxxxxxxxxxxxx>smallRNA(si3)   <------MYB46(1)               ----------- x>smallRNA(le3)            xxxxxxxxxxxxxxxx>smallRNA(si3)  <------MYB83         <---------ANAC46   - xxxxxx>smallRNA(le3)       xxxxxxxxxxxxxxx>smallRNA(le3)<---------MYB52(1)   ----------->HVH21    <- xxxxxx>smallRNA(se3)      <---------AtMYB61xxxxxxxxxxxxxxxx>smallRNA(si3)    ----------->TGA1   ----   gttggttagagcgtcgtgctaataacgcgaaggtcgcaggttcgaaacctgcatgggccatttggttttaaatcttttttgtgacgaagaagttgtgaat  15593200                                         <----------DOF2                                       --------------->AGL15                                       <---------------AGL15                                     ------>MYB46(1)                                     -------->P                                     ------>MYB83                                >>>>>>>>>>WRKY38                                >>>>>>>>>>WRKY26                                                  <--                                <-----------GT1                                                ------   --------->YAB1          <---------AHL20(2)                                                -------- >GT1                     --------->AHL20(2)                                     ------>NtERF2 <----- -------->YAB1            <---------AHL20(2)                                    --------->ANAC58<---- --------YAB1            --------->AHL20(2) ---------->DOF2                     --------->ANAC58----- ------->GT1  --------->ATHB12  >>>>>>>>>>WRKY43 <----------ID1    ----------->GT1          <--------   tgtgataatatttgtttcattggacaatttaaattgaccaactctttaaagaagacaagactttctacaatgtaaattgactacgcccatgagtatcatc  15593300  Previous    Next  AGI:  At5g38900.1    Description:  DSBA oxidoreductase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO49213.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain DSBA oxidoreductase; (InterPro:IPR001853) Range:  from: 15590735    to: 15592848    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g38905.1    Description:  pre-tRNA. tRNA-Ile (anticodon: AAT) Range:  from: 15593087    to: 15593160    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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