Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ICU4                                           --------->ANAC58                                           --------->ANAC46                                           --------->ANAC58                        ---------->DOF2                                         <-----------GT1                        --------->HSFB2a(2)                       --------->SPL7    --------->MYB52(1)                     <---------HSFB2a(2)                    <---------ANAC58 --------->DAG2                       --------------->AGL15              <---------YAB1   <-----------RAV1(2)                       ----------------->AGL2           <---------YAB1    ------>ZmHOX2a(1)============================================MADS_MADS       <---------GLK1(2)   ----------->RAV1(2)--------------->AGL15    <---------ARR14(2)     -------  --------->TOE2(3) <---------ANAC58---------->DOF2                    --------->ARR14(2)     <------   gaaaccatagattatgattcttgggtacctcctgcaggtaaagtaacgccatgtttagaaacacattgaatcaaatcccgttttagaaagtggctaatga  15572000                           --------->ARR14(2)                 --------->HSFB2a(2)                           --------->GLK1(2)                ----------->RAV1(2)                           <---------ARR14(2)           <---------At5g28300                       <------ZmHOX2a(1)              ----------->HVH21                   --------->LBD16 -->ICU4            <---------AtLEC2         <---------ARR11(3)                          --------->HSFB2a(2) ---ATHB12        --------->ALFIN1           --------->ARR11(3)   --------->ARR11(3)     <---------HSFB2a(2)   gtaatgtattgacttgaaatgtgcaggacaatctggtgatgggcgaacatctctaaatgaccgtctgggatattgatcagcgatagagtttccagagcaa  15572100                                     <-----------HVH21                                 <---------ARR11(3)                            --------->ANAC46                                 --------->ARR11(3)                      <-----------HVH21                          <---------ANAC58                           <---------ANAC58              <---------AtMYB61 --------->RVE1(1)                    <---------ANAC58           <------ZmHOX2a(1)    --------->CCA1(1)            ----------->GT1 <---------ALFIN1 <------         <---------TOE2(3)<---------ANAC58                   <---------At4g35610       ----------->GT1    <------ZmHOX2a(1)     <---------ANAC46      <---------AtLEC2  --------->GLK1(1)  <----------DOF2   actataggattgaggagaggtagaagtggcttaaatatctgtcaagttttgcatcactcagtctggtgatttcttggtcacacagtactttgtaaattca  15572200                                                                                                    -                                                                                          --------->At4g35610                                                                                          --------->SPL7                           <---------AHL20(1)                                 <---------AHL20(2)    <                           --------->ARR11(3)                             --------->AHL20(2)       <-                           <---------ARR11(3)                             <---------AHL20(2)     <---                      <---------WOX13(1)                                 --------->AHL20(2)    ------                    --------->ATHB12                     <---------YAB1  <---------AHL20(2)  <------NtERF2                   <---------YAB1          ----------->GT1               --------->AHL20(1)  --------                   ------>ZmHOX2a(1)      --------->ANAC58               <---------AHL20(1)<---------RAP2.6(2)              <----------DOF2 <---------AHL20(2)     <---------ANAC58 <---------ICU4     --------->ALFIN1            <---------At4g35610           --------->ANAC58           <---------YAB1    <---------ANAC58            --------->At4g35610 <---------AHL20(2)   <---------ANAC58--------->ICU4    <---------ANAC58 -TEIL ----------->RAV1(2) --------->AHL20(1)      <-----------GT1 --------->YAB1     <--------------   tactctaaaccctgagctttcctgattgatatatttttttttgaacggaaattttacttgtgatttatctcataatttattttatattagggtgcggcaa  15572300          --------->TGA1a          <---------ANAC55(1)          =========================bZIP_DOF          =========================bZIP_DOF          <---------ANAC58          <---------ANAC58     <---------ICU4 --------->ZAT6 ----------->CBF ---------TOE2(3) ----------GT1                       ----------->GT1 ------MYB52(2)                     --------->DAG2                                       --------->ANAC46 --->WOX13(1)           <----------DOF2   --------->ICU4           ------>ZmHOX2a(2)     --------->ANAC58 ---->CBF <---------ANAC46         ---------->DOF2         --------->ATHB12              --------->ANAC58 -AtSPL3  <---------TGA1a        --------->LBD16          <---------YAB1--------->YAB1*TSS   ttaacaatacttacgtctgtctctctctttctctccgaaaagtcaaaatgaataagccttatcatttgatccattcatagagcttatccaaacgcaatct  15572400                                                                     --------->CCA1(2)             --                                                                  ----------->ARR10              <---                        <---------HSFB2a(2)          --------->ZAT2 --------->ARR11(3)           <---                        --------->HSFB2a(2)          <---------ZAT2 <---------ARR11(3)           ----            ------>ZmHOX2a(1)                    --------->HSFB2a(2)<---------ARR14(2)           ---- --------->ANAC58<---------ANAC58                <---------HSFB2a(2)--------->ARR14(2)           ---- --------->MYB46(3)<---------At4g35610<-------TEIL--------->LBD16<------ZmHOX2a(1)               <--- --------->ANAC58<---------ANAC58    --------->CCA1(2)    <---------AtLEC2       <----------DOF2<----   ctcacgaccgtctcctatggcttctgctcgaacttggagatacaacgtcttcccgagcttccatggaggagatattcgtaagacttttctctctcattta  15572500 --------->ANAC58 --------->ANAC58 ------->TGA2(2)                                                        <---------ZAT2         ------ ------ANAC58                                                           --------->ZAT14        ------ ------ANAC58                                                           --------->ZAT2         <----- ----->ANAC55(1)                                                      ------->PIF5 --------->ANAC58 ----->ANAC55(2)                         --------->ANAC58            ----------->RAV1(2)      <------ ----->ANAC46                            --------->ANAC58     --------->TOE1(3)    --------->ANAC46 ------ANAC55(2)                         <---------TOE2(3)    --------->TOE2(3)  ---------->DOF2 ---- -----TOE2(3)                      <---------YAB1    <------ZmHOX2a(1)<-------PIF5 --------->ANAC58   cgtaagcagttcaactcaaatgggattacaatgtttgatgatcaaggaatcgagaggagccaaaccatagcccctgctctcatacaagcgattagagaat  15572600                                                                                                    -                                                                                                   <-                                                                                                  ---                                                  <----------DOF2                                 <--                                                 <---------ANAC58                          xxxxxxxxxx                                                 <---------ANAC46                          xxxxxxxxxx   --------->GLK1(1)                             <---------ANAC58                          xxxxxxxxxx   <---------GLK1(1)                            <---------MYB46(3)                        <---------ZAT6  --------->ARR11(3)                         <------MYB46(1)                    ---------->DOF2   <-- <------ZmHOX2a(1)                          <---------MYB46(3)                 xxxxxxxxxxxxxxxxxxxx>smallRNA(l2) --->GLK1(2)                                --------->MYB111(1)      --------->GLK1(2)    xxxxxxxxxxx --->ARR14(2)         ---------->DOF2       <---------AtMYB61       --------->ARR11(3)   xxxxxxxxxxxx ----ARR14(2)<---------MYB46(3)<---------YAB1<------MYB83           <---------ARR11(3)   <xxxxxxxxxxx ---GLK1(2)<---------------------WRI1       --------->ALFIN1      ----------->ARR10 <---------------- ----->TOE1(2)    <----------DOF2          <--------P       <---------AtMYB61--------->AtLEC2     ---   ctaggatatcgattgtggttctttcaaagaactatgcttcttcgagttggtgcttgaatgaattggtggagattttgaaatgcaaagacgtagtgatgcc  15572700               <------ZmHOX2a(2)              --------->AGP1              <---------ARR11(3)              --------->ARR14(2)              --------->ARR11(3)              <---------ARR14(2)           <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)          <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----->ZmHOX2a(2)                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -----ZmHOX2a(2)                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              < ------>ARR14(2)                                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              <- -------ARR14(2)                           xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <xxxxxx xxxxxxxxxx>smallRNA(le3)                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                 <xxxxxx xxxxxxxxxx>smallRNA(si3)            --------->MYB52(1)                                    ========== xxxxxxxxxxx>smallRNA(le3)  --------->ANAC58 --------->GLK1(2)                          ============= -------ARR11(3)            --------->ANAC46<---------ARR11(3)                          <------ZmHOX2a(1) xxxxxxxxx>smallRNA(le3)   ------->TEIL   ----------->ARR10                 ----------->GT1<------ZmHOX2a(1) xxxxxxxx>smallRNA(le3)    <---------LBD16xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxsmallRNA(le3)  <---------SPL7 --------->LBD16                   ---------->DOF2  ========== -------TaNAC69(2)    <------------------SPL14  <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      ============= ------>ARR11(3)<-------TEIL--------->ANAC58--------->ARR11(3)  --------->YAB1        <---------TOE2(3)   gatcttctatgaagtagatccatccgatgtacggaaacagaccggagattttgggaaggccttcaaaaatagttgtaaaagtaaaactaaggaggagagg  15572800                       <-----------RAV1(1)                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                <---------AHL20(2)               <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      ------->TEIL<xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------ARR14(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->ARR14(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxsmallRNA(s)                --------->ZAT14 -----NtERF2  <----------DOF2               <---------ZAT14 xxxxxxxxxxxxxxsmallRNA(si3)          <xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxsmallRNA(le3)        <---------ZAT2 =============HOX2a_HOX2a           --------->ZAT2                                              <---- ==============HOX2a_HOX2a          --------->At4g35610                                     <-------- ==============HOX2a_HOX2a    ----------->RAV1(1)                                          <---------ANAC58 =============HOX2a_HOX2a <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->MYB52(2)           <---------ANAC58   cagagatggatccaagctttaatttttgttggcaacatagctggagaacactcgctgaaatggtttgtttgttttcgatcgactaattttggggctttct  15572900  Previous    Next  AGI:  At5g38840.1    Description:  forkhead-associated domain-containing protein / FHA domain-containing protein. similar to forkhead-associated domain-containing protein / FHA domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G47790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49236.1); contains InterPro domain Forkhead-associated (InterPro:IPR000253); contains InterPro domain SMAD/FHA (InterPro:IPR008984) Range:  from: 15568526    to: 15572307    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g38850.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G16870.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G63870.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G58120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64662.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA+ ATPase, cor Range:  from: 15572386    to: 15575962    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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