Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------        <---------MYB52(1)                                                               <---------ARR14(2)       --------->LBD16  <---------AGP1                                                   <---------GLK1(2)      --------->ANAC55(2)                ---------->ID1                            --------->ATHB12 -At4g35610   <----------DOF2        <----------DOF2                               --------->ATHB51 -ZAT2<---------ANAC55(2)    <-----------RAV1(1)                                   -------->ATHB1 >At4g35610--------->ICU4 ------>ZmHOX2a(2)       ---------->ID1   <----------DOF2<---------YAB1    -   tttttgctccgtaatgctttattttggatctatgttggactttgttttttttgtttttttttgtcgagactttgtttgttttgtattattggattctgat  15546800                               <---------ANAC55(2)                              <---------LBD16                            <---------ARR14(2)                      --------->GLK1(1)            ----------------->AGL1            ----------------->AG           <-----------GT1  --------->ARR14(2)         --------->AHL20(2)           <-----------------AGL1                     --------->YAB1           <-----------------AG--------->ANAC55(2)   --------->AHL20(2)   <---------AHL20(1)     <--- --YAB1   <-----------GT1--------->AHL20(2)      --------->AHL20(2)       <---------ARR11(3) -------- -------->ANAC46      <---------GLK1(1)     --------->AtMYB61    --------->ATHB51            --------   acacttagcaattttccaatttggaaatcaaatacgggatggacgaccaaaaaaaataaaaatacaactattgcaatatatgttttcaaaaacaattaaa  15546900                   <----------DOF2                  <---------ANAC58           <---------ANAC58                       <---------AHL20(2)                  <-----------GT1           <---------ANAC46                   <---------DAG2                  <----------DOF2 --------GT1      <---------ANAC58         <-----------GT1               <-----------GT1 ->AHL20(2)<---------ANAC58           ------>ZmHOX2a(1)              --------->AHL20(2)             - ->YAB1 <----------DOF2        <-----------GT1<----------DOF2        <---------AHL20(2)  <----------DOF2   aaccccatcactttcgtattgctttctaactataaacttcctatattactttttaattcagtagttttttttttaatacgctttaaaattactttagaaa  15547000                                                                 --------->AHL20(2)                                                                <---------AHL20(2)                                                                <---------YAB1            --------->ZAT14                               --------->AHL20(2)            <---------ZAT14                         <---------TOE2(3)               <---------HSFB2a(2)      <-----------GT1                            <---------ARR11(3)   <-----------GT1  <---------GLK1(2)     <---------YAB1                              --------->ARR11(3)  <-----------GT1--------->HSFB2a(2) ---------->GT1         <---------YAB1          --------->YAB1<---------ICU4   <---------MYB52(1)  --   tcgagttataacagttcagtagttttatatttggcaaatatttcgatgaaagataatgttttaaatattatttatcagcccgttttctagatttgtttgg  15547100               <---------WRKY38(1)               <---------WRKY12               <---------WRKY45                            --------->TOE1(3)              <<<<<<<<<<WRKY11                       --------->ANAC46              --------->WRKY18(1)                    --------->ANAC55(2)              <<<<<<<<<<WRKY43                       --------->ANAC58              <<<<<<<<<<WRKY6                        --------->ANAC58              <<<<<<<<<<WRKY38                      --------->SPL7              <<<<<<<<<<WRKY26                    <---------SPL7            <------MYB83                         <---------ANAC58            <------MYB46(1)     --------->ANAC58 <---------ANAC58           --------->MYB59      --------->ANAC46--------------->AtSPL3       <---------AHL20(2)       --------->ANAC58<---------------AtSPL8             <---------DAG2      --------->AHL20(1)    --------->YAB1      <-------TEIL                       <----------DOF2      <---------AHL20(1)   --------->ICU4       --------------->AtSPL8            ----------------->AGL1      <---------ARR11(3)   <---------YAB1       <---------------AtSPL3          <-----------GT1 ------->At4g35610       --------->YAB1<----------DOF2     --------->TOE2(3)<---------AHL20(2)  -----   catctctatatatttggtcaacttctgtcattataagctatctttacaaattcgtacgcaaccttgaataccacatatttttttgccttatcgagcgcat  15547200                                                               <-------GAMYB                   --------->At4g35610            <----------DOF2                   <---------At4g35610           <---------ANAC58                              <-----               --------->ALFIN1              *TSS<---------ANAC58                            ------->GAMYB       <---------YAB1                    ------------>CBF  <----------DOF2                   ======== ------>GT1    <-----------RAV1(1)--------->AHL20(2)   <---------CCA1(2)                  --------->MYB52(1)   gttaattttcttattaagtgctgctgttccaaacttttaaatatgcaatttgctttcatctctttcgttgtaactgagaaattttaagagaataacgatc  15547300                                                 <---------DEAR3(1)                                                --------->ATERF1(1)                                                <------NtERF2                                               <---------ORA47(2)                                               <---------ERF1                                               <---------RAP2.3(1)                                              <---------DEAR3(1)                                              <---------RAP2.3(3)                                              <---------DREB2C(2)                                              <---------RRTF1(3)                                              <---------RRTF1(2)                                              <---------RAP2.3(2)                                              <---------RAP2.6(2)                                              <---------ATERF1(2)                                              --------->ATERF1(2)                                              <---------ANAC46                                             --------->ATERF1(1)                   --------->ARR11(3)      --------->ALFIN1          <---------O2                  --------->ATHB12          --------->O2             --------->MYB46(3)          <---------ANAC55(2)     --------->ANAC58                        <---------ICU4          --------->ANAC55(2)     --------->ANAC58   --------->YAB1    --------->YAB1          <---------TGA1a        --------->SPL7------>NtERF2           --------->TOE2(3)      <-----------HVH21        <---------SPL7<---------ABI4(1)        <-------TEIL          <-------- -ZmHOX2a(2)       <---------ARR11(3)  <---------ATHB12       ----------->GT1               --------- ===================MYC_MYB  --------------->AtSPL3 --------->ICU4<-------TEIL  ------>ZmHOX2a(1)   aaacacagagtcacatgtcaacatcttctcagtcgtacccaatgagtggcggcgatgatcaacacagttacatccataattcctcataccaagtatgtaa  15547400                                                                 --------->ANAC58                                                                 --------->ANAC58      --------->YAB1         <---------YAB1                      --------->ANAC46                  <-     <---------YAB1       --------->ICU4                  --------->TOE2(3)                     -----   --------->YAB1    ----------->GT1                      --------->YAB1                       <-----   <---------ICU4  >>>>>>>>>ARR2                       <-----------GT1                        -------  --------->ICU4 <---------YAB1         <---------MYB52(1)--------->TOE1(3)                   -------  <---------ATHB12 >>>>>>>>>ARR1<---------YAB1 --------->HSFB2a(2)                            <------ -ANAC55(2)    <-----------GT1  --------->ICU4 <---------HSFB2a(2)    --------->ICU4          <------ >ANAC55(2) <---------AHL20(2)--------->YAB1   ------>ZmHOX2a(1) --------->AtLEC2            --------   tgtaatcatcatattttatacgattgtaactatgatgattctgttattcctagaatgtaaccataacatgcaatttttgtgagactaatccctaaatata  15547500                 <-----------GT1             <---------ICU4          --------->YAB1        --------->ZAT14        <---------ZAT14   --------->ZAT14   <---------ZAT14   --------->ZAT18   <---------ZAT18       <----------DOF2 --------------AtSPL8   --------->TOE2(3) ---->ARR11(3) <---------WOX13(1) ----CCA1(2) --------->YAB1                                                                         - -->ARR11(3) -------->HAHB4                               <-----------------AGL1                 ---- -->AHL20(1) --------->ATHB12                <<<<<<<<<<AtWER          --------->ANAC58          <---- ---ARR11(3)<---------YAB1                 --------->ANAC58      --------->DAG2                ------ ---AHL20(1)--------->ICU4                 --------->ANAC58    ---------->DOF2                 <----- ->AHL20(2) <---------ATHB12         ---------->DOF2     <-------TEIL --------->ANAC58     --------->TOE2(3)   tctagtacactgtaatgattaacatacctttgtgatacagaaagcaggcatagatggggttcaagaaaaggcaagacaatacattttagaaaacctcgat  15547600                                                <---------MYB46(3)                                              <---------ANAC58                                              <-------GAMYB                                              <---------ANAC58                                    ---          ------->TEIL                  <---------GLK1(2)                                     -------       <---------YAB1          <---------YAB1<---------MYB46(3)                              -------- ------>ZmHOX2a(1)        <----------DOF2   <---------YAB1                               --------->ATHB12 -------->TOE2(3)   --------------->AtSPL8  <---------TOE2(3)                           <---------YAB1 -->ZmHOX2a(2)    --------->YAB1        <---------ARR14(2)          <---------DAG2     <---------ARR11(3) -----GLK1(1)     --------->TOE2(3)     --------->ARR14(2)          <----------DOF2    --------->ARR11(3) --->ARR14(2)    <---------ATHB12       <---------ARR11(3)       --------->ZAT6       --------->CCA1(1) ----ARR11(3) <---------------AGL15     --------->ARR11(3)    ----------->HVH21       --------->RVE1(1)   ctccttaatatgaatcccaatcttagtacttttacaattgcagattttggttgttctattggccctaacacttttcatgctgttcaaaatatcattgata  15547700  Previous    Next  AGI:  At5g38780.1    Description:  S-adenosyl-L-methionine:carboxyl methyltransferase family protein. similar to methyltransferase-related [Arabidopsis thaliana] (TAIR:AT5G38100.1); similar to defense-related protein [Brassica carinata] (GB:AAK50345.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299) Range:  from: 15547245    to: 15548752    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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