Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->WRKY12                                                                                   --------->DEAR3(1)                                                                                  <------NtERF2                                                                                  --------->ATERF1(1)                                                                                  --------->RAP2.3(1)                                                                                 ------>NtERF2                                                                                 <---------ATERF1(1)                                                                                --------->ANAC58                                                             --------->LBD16    --------->ANAC58                                                            <---------LBD16     --------->DEAR3(1)                                                            --------->LBD16    --------->ATERF1(1)                                                           ----------->RAV1(2)<---------ATERF1(1)                             ----------->RAV1(1)           <---------LBD16   --------->ARR14(2)                             ====================RAV  <---------MYB52(2)    <------ZmHOX2a(1)                          --------->ANAC46            <---------MYB111(1)   ========================HOX2a_HOX2a                          --------->ANAC58           --------->HSFC1(2)  --------->HSFB2a(2)   <-----                          --------->ANAC58       --------->ANAC58        <---------HSFB2a(2)  -------                        ---------->DOF2          --------->ANAC55(2)     <-----------RAV1(2) ------>ZmHOX2a(2)                   <---------At4g35610           --------->ANAC46      <------NtERF2------>NtERF2                   --------->At4g35610           --------->ANAC58     <---------SPL7<-----------HVH21               --------->ANAC46                <-----------GT1       <---------ANAC58  <-------GAMYB              --------->ANAC46       <-----------RAV1(2)-------->P   <---------ANAC46 <---------MYB46(3) ------->GLK1(2)   <------NtERF2  <------ZmHOX2a(1) <-----------ARR10<---------ANAC58<------NtERF2 --   gaatccatcccaataccaggcagcgaagaagcaacaggaacagatgattttacgaaactacccctggaatggcgtccaggagacgccgtcgttgatccat  15487600                                                        --------->At4g35610                                                     --------->At4g35610                                                     <---------At4g35610                                                     <---------ZAT2                                                    ----------->RAV1(1)                                                 --------->ANAC58                                                 --------->ANAC58                                                 --------->ANAC46                                               <---------TGA2(2)                                              ----------->HVH21                                              ----------->TGA1                                            <---------At4g35610           --------->DEAR3(1)               ================================RAV       <---------At5g28300                  ==========================RAV       <---------LBD16                      --------->At4g35610      --------->MYB52(1)                    ====================RAV   --------->GLK1(1)                        --------->ZAT2      ----------->RAV1(1)   <---------GLK1(1)                        ----------->RAV1(2)----------->HVH21 ------HVH21  <---------O2                --------->ANAC58   --------->ANAC46                  <----- -->WOX13(1)------>NtERF2           <------ZmHOX2a(1)--------->ZAT2 <---------At4g35610     --------- ------->LBD16--------->O2  <----------ID1--------->ANAC58----------->RAV1(1)      ---------->DOF2   cagggaaatcacggcgacttgagtaagaaaacgaagaaggagacacggctgacgcagcagcaccagcgacagcgactcgaagagggaaagtatcagagga  15487700                        <---------LBD16                       <---------ANAC46        <------ZmHOX2a(1)                                    -                    ----------->HVH21         ----------->GT1                                       <                    ----------->TGA1     <---------HSFB2a(2)                                        -                  <---------ICU4         --------->HSFB2a(2)                                       <-                  --------->YAB1         --------------->AGL15                                 <-----                 --------->ICU4          <---------------AGL15                            ------>ZmHOX2a(2)                 <---------ATHB12       ----------------->AGL1                           <------ZmHOX2a(2)         --------->ALFIN1               <---------LBD16                              --------->At4g35610        <------ZmHOX2a(1)              --------->MYB52(1)                --------->At4g35610 <-------      --------->ALFIN1 <---------bZIP60(2)--------->LBD16           >>>>>>>>>TBF1 --------->At4g35610 -ZmHOX2a(1)  <------ZmHOX2a(1)        <---------At5g28300       >>>>>>>>>TBF1    <---------At4g35610 >At4g35610<------ZmHOX2a(1)    ------------>MYB.PH3(2)       >>>>>>>>>TBF1       <---------ZAT2  <--   attgagacgaggaggaggaatcatgacgggggagagtgagttaccggaaggagaaatggtggaagaagaagaagaagcagaggtagcagcgatcgggtcg  15487800                                                                                  <---------HSFC1(2)                                                                                  --------->HSFC1(2)                                                                                  <---------HSFB2a(1)                                                                              <------NtERF2                                                                             ------>NtERF2                                                                          <---------RAP2.3(1)                                                                         <---------DEAR3(1)                                                                   ------>ZmHOX2a(2)      --------->O2      <---------MYB46(3)                                         <---------ARR11(3)       --------->TGA1a <-------GAMYB                                                   --------->ARR14(2)   --------->DEAR3(2) -------->MYB111(2)                                         <----------DOF2 <---------ANAC46 ---------MYB46(3)                              ------>MYB83========================================bZIP_DOF -------->MYB55(2)                              ------>MYB46(1)  <---------ARR14(2) --------->ARR14(2) -------P                 <--------P         --------->DEAR3(2)  --------->ARR11(3) <---------ARR14(2) ----ANAC46 <---------At4g35610            --------->MYB52(1)    <---------AGP1   --------->HSFB2a(1) ----HVH21 <---------ANAC46   <---------At4g35610     --------->ETT(1)   --------->ANAC46 <---------O2 -------MYB52(1)    ------->TEIL   <---------ANAC46 <-----------HVH21   <---------LBD16   <---------TGA1a   ggttgttgttgttgagttgatgaatcgggttgagatgatgtgaagaaaccgacttgtcggacctttggatctactacggcgcgagggttccgacgagact  15487900                                                      <---------AHL20(2)                                                      *TSS                                                     --------->AHL20(2)                                                     <---------AHL20(2)                                                    <---------YAB1                                                  <---------ICU4                                                  <--------HAHB4        <---------AHL20(2)           <------ZmHOX2a(1)                      -------->ATHB1        --------->AHL20(2)        <------NtERF2                             --------->ATHB51     <---------AHL20(2)      <---------DEAR3(1)                         --------->ICU4        --------->AHL20(2)     <------NtERF2                          --------->ANAC46      ------>ZmHOX2a(2)    --------->HSFB2a(2)    <-----------HVH21 <---------LBD16       --------->ANAC58    <---------ARR14(2)     <---------HSFB2a(2)   <---------ANAC46 --------->ARR11(3)      --------->ANAC58<---------LBD16         <-----------GT1   ccatcgcgtcggaggagaagaagctctggattttttctcggtgaagacggaattattaattttggggatcgaatttaatttttgttttcccagacgaata  15488000                                 <----------DOF2                              <---------AHL20(2)                              <-----------GT1                          --------->AHL20(2)                          <---------AHL20(2)                         --------->ANAC46                      <---------AHL20(2)                     --------->ZAT14                 --------                     <---------YAB1                          <---------ZAT18             <----------DOF2                    <---------AHL20(2)                       <---------ZAT14          <--------------                  <---------YAB1 <---------DAG2           ------->GAMYB             --------->YAB1                <---------AHL20(2)                       --------->ZAT6            <<<<<<<<<ARR2          ----------->GT1<---------AHL20(2)            <-----------GT1             <<<<<<<<<ARR1<----   aaacgtagaatagggtttttatttttatttatttactttttcagatttatccgatgttaacagtccagtccgagtcactaaaacaatcttactttgttct  15488100                                                      --------->GLK1(2)                                                     <---------GLK1(2)                                      <---------AHL20(2)                                     --------                                      --------->AHL20(2)                                  --------->YAB1                                     <---------AHL20(2)                                   -------->HAHB4                                     --------->AHL20(1)                                   <---------ICU4                                     <---------AHL20(1)                 <---------AtMYB61--------->ICU4 -->ID1                              --------->AHL20(2)           <---------TOE1(2)    --------->YAB1 ----------ANAC81             <-------MYC3     <---------YAB1     <---------TOE2(3) --------->YAB1 ------DOF2                   ------->MYC3<---------AHL20(2)      <---------TOE2(2)>>>>>>>>>MYB98   <   tttgtttttgttttgtttagagtattaatccatatgcaatttatttattctaatagaatctagtatccaaggttttggtgtcagtaacataataatgaaa  15488200               <---------AHL20(2)                        --------->CCA1(2)         --------->TOE2(3)                    --------->At4g35610         --------->YAB1                       <---------At4g35610       <---------ARR11(3)                   <---------ZAT14   --------->YAB1        --------->ANAC58   --------->ZAT18                             --------->YAB1 ->AHL20(2)    --------->AHL20(2) ----------->RAV1(1)  --------->CCA1(2)       <---------TOE1(2) ------ZmHOX2a(1)        --------->ANAC58   --------->ZAT14                    <---------TOE2(2)    -   taggagcataatcttatttaaataactaagcaagtccaacaaattgtgaactgagagagataagaactgaaacacagttcatatgttttatcatgttcag  15488300                                                       <------MYB46(1)                                                       <------MYB83                                                      <---------MYB46(3)                                                      --------->MYB55(2)                                                      --------->ALFIN1                                          --------->GLK1(2)                               ---------->DOF2                          <------ZmHOX2a(2)           <---------AtMYB61   --------->ARR11(3)              <---------ZAT14            <---------GLK1(2)                <---------ARR11(3)              --------->ZAT14          ----------->ARR10         --------->YAB1        --------->AHL20(2) --------->DOF2          <---------ARR11(3)  <----------DOF2    <-------TEIL------>ZmHOX2a(2)   agcaaaggagacacagtatagagaagagatcaaacaacaagtagattcttttagggctggtggaaattcataacatgatcttactcagattaaaaagcat  15488400                                                     <---------At4g35610                                                     --------->At4g35610                                                     <---------ZAT2                                                     ----------->RAV1(2)                                                     --------->ZAT2                    <----------DOF2                 --------->GLK1(2)                       ---------      --------->MYB52(1)                        <---------HSFB2a(2)            --------->ARR14(2)     ----------->HVH21                 --------->ANAC46                        <---------ARR14(2)     ----------->TGA1        <---------MYB46(3) --------->HSFB2a(2)       ------>MYB46(1)  --------->LBD16   --------->At4g35610      --------->ALFIN1   <---------LBD16            ------>MYB83    <---------ANAC46   <---------At4g35610   <---------AtMYB61------->TEIL       <----------DOF2 --------->RAP2.6(2)   atgagacctgacgaaggaaatactttgatggtggtgactacatgaaacttggggaagctgggcctttggagagaccaagccgaacttccatcccgtggtg  15488500  Previous    Next  AGI:  At5g38640.1    Description:  eukaryotic translation initiation factor 2B family protein / eIF-2B family protein. similar to GTP binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT2G44070.1); similar to hypothetical protein OsJ_011411 [Oryza sativa (japonica cultivar-group)] (GB:EAZ27928.1); similar to Translation initiation factor eIF-2B delta subunit, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97867.1); similar to hypothetical protein OsI_012425 [Oryza sativa (indica cultivar-group)] (GB:EAY91192.1); contains InterPro domain Initiation factor 2B related; (InterPro:IPR000649) Range:  from: 15484909    to: 15487954    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g38650.1    Description:  proteasome maturation factor UMP1 family protein. similar to proteasome maturation factor UMP1 family protein [Arabidopsis thaliana] (TAIR:AT1G67250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49284.1); contains InterPro domain Proteasome maturation factor UMP1 (InterPro:IPR008012) Range:  from: 15488191    to: 15490045    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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