Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------AHL20(2)              <---------AHL20(2)              --------->AHL20(2)              <---------ICU4                          --------->YAB1              --------->ATHB51                       <---------YAB1             --------->ICU4                      <---------GLK1(2)                <------MYB83             <---------YAB1                     <---------At4g35610               <------MYB46(1)           --------->YAB1              <---------AHL20(2)                         <---------MYB46(3)           <---------ICU4              --------->AHL20(2)                 --------->ARR11(3)          <---------AHL20(2)           --------->AHL20(1)                 <---------AHL20(1)     <---          <---------YAB1              --------->AHL20(2)<---------YAB1    --------->AHL20(1)     <---        --------->YAB1   <---------GLK1(2)  <-----------HVH21            --------->AHL20(2)      <---   ttattttgttttataattattttcttagattctacaaaaaaaaaattgtcagattattatgagagacacaaacaaatatatagttggttcttcacattat  15482800                                                                                                    <    --------->KAN4(2)  <------ZmHOX2a(2)              --------->ICU4                              --- ------ANAC58         <---------ARR11(3)              <---------YAB1                 --------->At4g35610 ------ANAC46         --------->ARR11(3)           <---------YAB1                 --------->At4g35610 ------ANAC58   --------->YAB1                   ----------->GT1   ---------->DOF2<---------At4g35610   cgtgtttattctttctaatcacaagatcaacaatgtagtatcactcttaaaatgtgattatgaagttaacaaagcttacatggtagcagaagaaaacatt  15482900       --------->LBD16     <---------LBD16    --------->MYB52(1)                                                                         ------   ------->GAMYB                  <----------DOF2      --------->ARR11(3)                   ---------  --------->MYB46(3)          <----------DOF2          <---------ARR11(3)          <---------YAB1 <-- ---------DOF5.7(2)        <---------ALFIN1      ---------->DOF2                 <-----------GT1 <--- ------>DOF5.7(2)   <----------DOF2        --------->YAB1  <----------DOF2  <----------DOF2 ---------   gttaacgaccggaagacttacactttgccacactttctttatttttcataacaaagagatacttttggagaatttcatcttttttactattcaatattaa  15483000                                                                                                    <                                                                                                   --                                                                                                  <--                                    <---------ANAC58                                              <--                                    --------->ALFIN1                                             <---                                  --------->ALFIN1                  --------->AHL20(2)           ----                                <---------ANAC58                   --------->YAB1                ---- --->WOX13(1)                   <---------ANAC58                  --------->AHL20(2)             ---- >TOE2(3)                <---------ARR11(3)                     --------->YAB1                   <--- -------ICU4             --------->GLK1(2)                    --------->AHL20(2)                 <--- ------ATHB12            --------->ARR11(3)   <---------YAB1 --------->YAB1  ---------->DOF2    ----- >YAB1               --------->YAB1 <---------ANAC58        --------->AHL20(2)               --------   tcaatactgttttgcctctgaaataaaaatctatgggtgtgtgtcattgtaattctctcaaaataaaaataaaaataggcaaagtagacataaacaaaag  15483100                                                                               --------->GLK1(2)                                                                               <---------ARR11(3)                                                                               --------->ARR11(3)                                                                              --------->CCA1(1)                                                                         <---------AHL20(2)     <---------------AGL15                                               --------->AHL20(2)    --------->ZAT6                                                    <---------ICU4 ----------DOF2                                                       --------->ATHB51 ---->ZmHOX2a(2)                                                      <--------HAHB4 ----ZmHOX2a(2)                                                       -------->HAHB4        --------- -------RVE1(1)                                                       <--------ATHB1        --------- ------ARR14(3)                                                       --------->YAB1      --------->AHL20(2) ----->ARR11(3)                                                      <---------YAB1       --------->AHL20(1) ----->ARR14(2)                                    ---------->DOF2   --------->AHL20(2)  --------->YAB1 ----->ARR14(3)                                 --------->TOE1(3)    --------->ICU4    --------->AHL20(2) ------ARR14(2)        ----------->HVH21        --------->TOE2(3)    <---------ATHB51  <---------AHL20(2) ------ARR11(3)  <---------ANAC46       <---------AHL20(2)         <---------ICU4     --------->YAB1 ---->RVE1(1) <---------MYB52(1)        --------->AHL20(2)         --------->YAB1    ----------->TBP- -->DOF2  <---------ATHB12   ---------->DOF2<-----------GT1     --------->YAB1--------->RVE1(1)     <   atctttactctaatcagttttgtgagtgacacaaagctccatttttttacccttaaatcaaattactaataataattaaaaaatcttataaaaataatat  15483200                  <---------WRKY18(1)                 --------->WRKY38(1)                 --------->WRKY12                <--------P                                <-----------RAV1(2) >YAB1 <---------ATHB12                          <------ZmHOX2a(2) >AHL20(2)      <---------WOX13(1)              --------->ARR14(2)        --------->GLK1(1) -------->HSFB2a(2)   *TSS    ---------->DOF2   <---------ARR14(2)        <---------GLK1(1) ---------HSFB2a(2)  --------->TOE2(3)    <---------WOX13(1)   ----------->GT1 --------->LBD16   ttctggcaaatcactctggttgacctcaaactcaaagtcgagtaattgccgatctaaaacacagggggtgattcagaaatccccaaaattcgactaaaaa  15483300                                                                                     <---------ANAC46                                                                                    <---------MYB46(3)                                                                                    --------->MYB55(2)                                                                                   <---------ANAC46                                                                                 --------->ABI4(2)                                                                                 --------->ZAT2                                                                                 <---------ZAT2                                                                                --------->ALFIN1                                                                               <---------MYB52(1)                                                                              --------->LBD16                                                                            <---------LBD16                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                         <-------GAMYB             --                                                                         --------->ATERF1(1)      <--                                                                        <---------MYB46(3)       <---                                                                        <---------DEAR3(2)       ----                                   <---------ANAC46                    <---------DEAR3(1)        <---                                ------>ZmHOX2a(2)                      <---------ANAC58          ----                            <---------YAB1      --------->ANAC58       <---------RAP2.6(2) --------->GLK1(1)                      ------>ZmHOX2a(1)         --------->ANAC58       <---------DREB2C(2) <---------GLK1(1)                      =================HOX2a_HOX2a                     <---------ANAC58   <---------ARR14(2)                      <---------YAB1     ---------->DOF2               <---------ANAC46   --------->ARR14(2)   ctaaaaccctagccctaattcatcctgattttgatcgccgtataaaagactcgcattttctgggcttagtatggcggttccggtgctgggtggatttccg  15483400          <---------ZAT6              <----------DOF2                                               - ---->ZmHOX2a(2)                    <------NtERF2                                                   < ----ZmHOX2a(2)                   <---------RAP2.6(2)                                    <---------YAB1 ------ARR14(2)                  <---------LBD16                                  <----------DOF2  -- ----->ARR11(3)              <---------ICU4                               <---------ANAC58      ----- ------ARR11(3)             <---------YAB1    ----------->HVH21       <------ZmHOX2a(1)<---------At4g35610 ----->ARR14(2)           --------->YAB1<---------AtMYB61   <---------ICU4<---------ANAC58--------->YAB1   atcttcatggtagtgagagttttgggtttcatcatcgcggctttggttttgacatggactgttcattacagaggaggcttagctctttcttctgataaca  15483500        =============================================bZIP_DOF        <----------DOF2        --------->TOE2(3)                                                                 <-------TEIL <------ZmHOX2a(2)                                                               ------->TEIL     <-- -------->ARR11(3)                                                               <---------ARR14(2) ---------ARR11(3)                         --------->TGA1a                       --------->ARR14(2) < ------->YAB1               <---------MYB46(3) ----------->HVH21                <---------CCA1(2) <-- ----->DOF2 <---------TOE2(3)              <---------TGA1a              <-----------RAV1(1)--------->YAB1   aagatcacatctttaatgtaattctctcgattgttgttttgactcacatgtgaaatggattggatgaaatgttcttgttgctgtatctgagattcatatt  15483600                                                               ------>ZmHOX2a(2)         <---------MYB46(3)                                   --------->At4g35610      <-----------RAV1(1)>>>>>>>>>SARD1                      --------->ARR11(3)                     < --------->ATHB12        >>>>>>>>>CBP60g                     <---------ARR11(3)               <------ -------ANAC58  --------->ARR11(3)   <----------DOF2  --------->ANAC58                        ------- ---------YAB1  <---------ARR11(3)   <---------DAG2   --------->ANAC46                       <------- -------ANAC58----------->ARR10   <-----------GT1     --------->ANAC58 --------->YAB1        --------   tcttgattgtgttgttgagatattgaaatttggattttacttttctgtgtgatcacaagctatgatctgagactcatatttggatgtataatgtcatcat  15483700  Previous    Next  AGI:  At5g38630.1    Description:  ACYB-1 (Arabidopsis cytochrome b561 -1); carbon-monoxide oxygenase. similar to ACYB-2 (Arabidopsis cytochrome b561 -2), carbon-monoxide oxygenase [Arabidopsis thaliana] (TAIR:AT4G25570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49280.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62730.1); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane (InterPro:IPR006593); contains InterPro domain Cytochrome b561; (InterPro:IPR004877) Range:  from: 15483222    to: 15485415    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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