Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------ARR14(2)                                --------->ARR14(2)                                --------->ARR11(3)                             <---------TOE1(2)                      <---------ICU4                      --------->ATHB12                      -------->HAHB4                                             <------ZmHOX2a(1)                 --------->AHL20(2) <---------ANAC46                         ---------->DOF2              --------->DAG2<---------LBD16                         <---------ANAC46         <-------             ---------->DOF2--------->LBD16        --------->AHL20(2)    <---------------AGL15    <--   ---------->DOF2   <---------ATHB12 ----------->GT1               <---------ANAC58         <------- ---------->GT1----------->GT1 <------ZmHOX2a(1)--------->TOE1(3)   <---------ANAC58      <---------- --->GT1----------->GT1    <---------ANAC46     --------->TOE2(3) --------->GLK1(2)    <----------DOF2   aaatgtaaagttgtaaaaagtaaatgattccgaggattttgtgtaaaaaaccttaaaatgttttagagtttcttgcactaaaaggataacttttactttt  15421500   <---------ALFIN1                                                                        <---------YAB1 --DAG2                --------->TOE2(2)           <----------DOF2             <---------YAB1 ---------GT1       <-----------GT1      <---------ICU4             --------->ANAC58      <---------AHL20(1) ---DOF2            <<<<<<<<<GT-1     <---------ICU4   ----------->GT1    ---------->DOF2 --------->AHL20(1) -GT1    ---------->DOF2 <-----------HVH21   --------->ZAT14        --------->ANAC58      --------->AHL20(2)   tttccaaaccccaaagtctgatttacctgtgagttaacaacaattactactctctttgagtaaaaatcgcatgccaaaaagattatagaaaatataatac  15421600                   --------->ANAC58                   --------->ANAC46                   --------->ANAC58               --------->CCA1(2)    <---------HSFB2a(1)                                                    --------->ANAC46<---------    --------->HSFC1(2)                                             --------->ANAC46       <---------DAG2    <---------HSFC1(2)----------->GT1                       <---------TOE1(2)--------->ZAT14    <----    --------->HSFB2a(1)--------->At5g28300   <---------KAN4(2)--------->REM1(2)        <---------ALFIN1   cgaagaaaattccaaatatacaagcagtaaattaagttgattttgggaatagtctacaatcccatgtacacatctccactacattccatacacctttttt  15421700                                              ------->MYC2                                              <-------MYC3                                              <-------MYC2                                              <-------PIF5                                              ------->PIF5                                              ------->MYC3                                             <---------O2                                             --------->TGA1a                                             --------->bZIP60(2)                                             ================================bZIP_DOF                                             <---------TGA1a                                             <---------ANAC55(2)                                             --------->ANAC55(2)                                             --------->O2                                           <------------OsbHLH66                                           <---------ALFIN1       ---------->DOF2                   --------->AHL20(2)   <---------ICU4          --------->ANAC58                -----             --------->ANAC58           --------->YAB1          --------->ANAC58            <--------             --------->ANAC58           <-----------GT1       --------->ANAC46           ------->TEIL   --------->RAP2.6(3)                 --------->MYB46(3)     --------->ANAC58      <---------AtLEC2  --------->MYB52(1)              --------->ANAC55(2)<-----------GT1               <-------TEIL <---- -DOF2--------->At4g35610    --------->LBD16 --------->ANAC46 --------->ANAC58  <---------ANAC58<---- -----AHL20(2)     --------->YAB1 <---------ANAC55(2)--------->ARR11(3)         <---------ANAC58-----   aatctaacggctcacaaacaataaaactctccgaataagtaatcaccacgtgatttatcttgacacaccaaagtttgtatagacgtgcatgtatgtaatt  15421800         --------------->AtSPL8         <---------------AtSPL8     <----------DOF2    <---------DAG2 <-----------GT1 ---->AHL20(2)                         ---------->DOF2 -AHL20(2)              <---------At5g28300      ------------>CBF -----AHL20(2)         <-----------GT1<---------AHL20(2)                *TSS        <---------ANAC58 -----AHL20(1)         --------->MYB52(1)  ----------->GT1   --------->DAG2         <---------ANAC58 ---->AHL20(1)   <---------YAB1     ----------->TBP         ---------->DOF2     <----------DOF2   aattaaccttttatgtactatgaattaactgtgttgatatataaagggtgactcaataccccaaaagcggtctctctctatactttgcttctctctctaa  15421900                                                            --------->REM1(2)                                                         <---------ANAC46                                                         <---------ANAC58                                                         <---------ANAC58                                                    <---------ARR11(3)                                                    --------->ARR14(2)                                                    <---------ARR14(2)                              ---------->ID1        --------->ARR11(3)                   <------ZmHOX2a(2)                              <-----------GT1       <---------GLK1(2)                --------->HSFB2a(2)                    ---------->DOF2                 --------->ARR14(3)               <---------HSFB2a(2)          <----------DOF2    <-----------GT1        <---------ARR14(3)   <---------MYB46(3)      <----------DOF2    <----------DOF2          ----------->ARR10      --------->MYB55(2)   acttctctctttctttttttctcaaagcttttttccttctccctaaacgatgaagattttcgtgaagactctcagtggttcgaacttcgagatcgaagta  15422000                                                                                    <---------MYB52(1)                                                                                   --------->LBD16                                                                                  <---------ANAC55(1)                                                                                  --------->ANAC55(2)                        <---------ANAC58                                          ----------->GT1                        <---------ANAC58                                          <---------ANAC58                     --------->GLK1(1)                                            <---------ANAC58                ----------->GT1                                              <------MYB46(1)          --------->DAG2<---------ANAC46                           <------MYB83--------->ARR14(2)          <---------TOE1(3)                         <----------DOF2<------MYB46(1)<---------ANAC55(2)          <---------TOE2(3)        --------->ARR14(2)             --------->MYB59 <---------ANAC46<--       <---------ARR14(2)          <---------ARR14(2)  <-----------GT1       <------MYB83         <--   aaacctgcagataaggtatagtgatttcttgaattcgaatcgtcttctctgtttctttaactgtttattaggtctgatttggttccgtaattcgattttg  15422100                                     --------->ARR14(2)                                     <---------ARR14(2)                           <---------ARR14(2)                                           <------MYB46(1)                           --------->ARR14(2)                                           <------MYB83                           <---------ARR11(1)                                         <--------P<----                          <---------ARR14(1)                <---------ANAC58      <---------ANAC46            <---------LBD16------->TEIL                     <---------ANAC58      <---------ANAC58  -          --------->GLK1(2)--------->GLK1(2)      --------->GLK1(2)   <---------SPL7  --------->ALFIN1   ----------->GT1        <---------CCA1(2)  <---------AHL20(2)   <---------AtLEC2<---------ANAC58  - -------ANAC58----------->GT1        --------->GLK1(2)      <---------ANAC46     <---------LBD16<---- -------ANAC58--------->LBD16     <---------TOE1(2)   <---------TOE1(2)        <XXXXXXXXXXXXXXXXXXXXMIR832-3P   ccttggggaaaaattccggtgaattagcgaatctcgtagtatctgatttaaaattctaggtttcgtttgcatcgtactcttgtttcgggttgggaattgt  15422200        <---------ANAC55(2)        <---------ANAC58        <---------ANAC46                                                                           <-        --------->ANAC55(2)                                                                        --        <---------ANAC55(1)                                                                        --        <---------ANAC58             --------->ARR14(2)                                        <-----       <-------TEIL                  <---------ARR14(2)                             <-----------RAV1(1)   <---------bZIP60(2)         --------->ARR14(2)      <---------ANAC58             --------->ALFIN1 -----ANAC58                   <---------ARR14(2)      <---------ANAC46    --------->ATHB12    ------ ---------->HVH21          <---------WOX13(1)          <---------ANAC58   <---------YAB1      ------- ---------->TGA1         --------->ATHB12      <---------TOE1(3)      <---------ZAT14         <------ -----ANAC58            <---------YAB1         <---------TOE2(3)      --------->ZAT14  <---------ANAC46   ttgtgacgatgcgtgtttctgtttctgtgattggattcgaattcgaattagggtttttcgtgagtatgtaagtatagtgattgtatgtgttgggaattta  15422300        ----------->GT1                                    <----------DOF2   <-----------GT1                                        <---------ANAC58 --------AHL20(2)                                         <---------ANAC58                      <---- ------->AHL20(2)                                      ---------->ID1 <---------YAB1        <-------- ------->YAB1                                          <---------MYB52(1)               <---------ANAC58 ----AHL20(2)                                        --------->MYB52(2)      --------->GLK1(2)  <---- --->AHL20(2)                 <---------ANAC58       <---------MYB46(3)     <---------GLK1(2)   <---- -->AHL20(2)             <---------ICU4      <---------ATHB12     --------->ARR11(3)    <---------ANAC58 ---AHL20(2)   ----------->GT1<---------ANAC58      <-------TEIL<---------ZAT6<---------At4g35610 ---   attatatactgtgtaaattgtatatagttatggcttcttgttttcccatcaacattcgttgctttagtgatcatgctggaatctgattttgcttctttaa  15422400  Previous    Next  AGI:  At5g38470.1    Description:  DNA repair protein RAD23, putative. Identical to Putative DNA repair protein RAD23-4 (RAD23-4) [Arabidopsis Thaliana] (GB:Q84L30;GB:Q94C35;GB:Q9FF16); similar to RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3), damaged DNA binding [Arabidopsis thaliana] (TAIR:AT3G02540.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96879.1); contains InterPro domain Heat shock chaperonin-binding (InterPro:IPR006636); contains InterPro domain UV excision repair protein Rad23; (InterPro:IPR004806); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940); contains InterPro domain Ub Range:  from: 15421872    to: 15424941    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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