Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->O2       --------->ANAC46 ----------->HVH21 --------ANAC58 --------ANAC58 ------->ANAC55(2) --------ANAC55(2) -----TEIL  <---------At4g35610                         --------->GLK1(2) ----->CCA1(2)                     <------ZmHOX2a(1)  --------->HSFC1(2)                     <------- ---->ARR11(1)                --------->GLK1(2)       --------->HSFB2a(1)                   ========= -----GLK1(2)                --------->ARR14(2)       <---------HSFC1(2)  --------->YAB1    ========= -----ARR14(2)               <---------ARR14(2)       <---------HSFB2a(1)<---------YAB1     <------ZmHOX2a(1) ---->ARR14(2)          ----------->RAV1(1) --------->GLK1(2)          <----------DOF2     ---------- ---->ARR10 --------->At4g35610<-------TEIL<---------ARR14(2)   ------->TEIL         ---------->DOF2 >CCA1(2)  <---------ARR11(3)<---------GLK1(2)     <------ZmHOX2a(1)------->TEIL ----------->GT1-----   ttcgtgaccacgagagcttagaagagcaacagattcaggattgaagaatcggaggaagattccatggatgtaactttgataagcagttaaaggaggataa  15417900                                                                       <-----------GT1                                                                  <-------GAMYB                                                                 <---------MYB46(3)                                                            --------->CCA1(2)                   ------>ZmHOX2a(2)                       --------->ARR14(2)     --------->LBD16<-------GAMYB                          <---------ARR14(2) --KAN4(2)        <------ZmHOX2a(2)                        <---------ARR11(3)             <---------At4g35610 ========================HOX2a_HOX2a         <---------ATHB12   <---------TOE2(3)         --------->ZAT2 =========================HOX2a_HOX2a       ------>MYB46(1)--------->ARR11(3)             <---------ZAT2 ->GT1           --------->ARR11(3)         ------>MYB83  <---------HSFB2a(1)--------->MYB46(3) ---->GLK1(2)    <---------ARR11(3)        --------->WOX13(1)   ---------->ID1            --------->At4g35610   tctaatccccagtaagtgagatcgttgtaagtgccatttctataccaatcgataactggaagatttgtggttatctccatccaatgtctctgagcttcga  15418000                            --------->LBD16                           --------->DEAR3(1)                          <------NtERF2                          --------->RAP2.3(1)                          <---------LBD16                          --------->ATERF1(1)                         ------>NtERF2                         <---------RAP2.6(1)                         <---------RRTF1(1)                         <---------RAP2.3(1)                         <---------ERF1                         <---------ATERF1(1)                        <---------DEAR3(1)                        --------->DEAR3(1)                       --------->RRTF1(1)                       --------->ERF1                       --------->RAP2.3(1)                       --------->RAP2.6(1)                       --------->ATERF1(1)                      --------->LBD16                       <------ZmHOX2a(2)                      ------>NtERF2                        --------->ARR14(2)                      <---------ATERF1(1)                  <---------ARR14(2)                      <---------RAP2.3(1)               ------>ZmHOX2a(2)                    <---------LBD16                    <------ZmHOX2a(2)                 <---------GLK1(1)                    <---------ARR14(2)                 --------->GLK1(1)     <-------TEIL   --------->ARR14(2)       --------->At4g35610               <------ZmHOX2a(1)   ----------->GT1--------->At4g35610          <---------At4g35610            <------ZmHOX2a(1)<------NtERF2        <---------At4g35610          --------->GLK1(1)    <   --------->DEAR3(1)<---------RAP2.3(2)      <-----------GT1    ---------->DOF2  <-------TEIL     <-   aatcgccgaatttaggaggaattccggcgccggagtatggatacattgttacagcagatcggatcagtaatgcgaagagggagatgcagagaaatgaagt  15418100                                                 --------->MYB52(2)                                              <---------MYB52(1)                                             --------->LBD16                                           ------>ZmHOX2a(2)                                           <---------LBD16                                          --------->ARR14(1)                                          --------->CCA1(2)                                          <------ZmHOX2a(2)                                      ----                                         <---------ARR11(3)                                     -----                                         <---------ARR14(2)                                     <----                                         --------->ARR11(3)                                     <----                                         --------->ARR14(2)                          <------NtERF2                                         --------->ARR11(1)                         --------->LBD16                   --------->RAP2.6(2)   --------->ARR14(3)            <---------TGA2(1)<---------HSFB2a(1)       <---------MYB52(1)                <---------ARR14(3)            --------->bZIP60(1)      -----      <---------DAG2  --------->AtMYB61 <---------GLK1(1)              --------->TGA2(1)--------->HSFB2a(1)      <----------DOF2 <---------ALFIN1  --------->HSFB2a(1)            <---------bZIP60(1)    <------  <---------ARR14(2) --------->MYB46(3) <---------HSFB2a(1)       --------->YAB1   --------->LBD16<--  --------->ARR14(2)------>NtERF2--------->WOX13(1)          --------->LBD16      <---------LBD16<--- ---------MYB46(3) --------->ANAC46     --------->GLK1(1)  <---------LBD16  --------->At4g35610<----- --------AtMYB61  --------->MYB46(3)   ----------->ARR10  --------->MYB52(1)<---------At4g35610------   tgtggttcctttatgtgttagccaccaccaagtatcaatcgaagatccggtttgtggtgataccggaatggtgatgtcatcttcgccggaatgtttcgcc  15418200    <<<<<<<<<TBF1 -->NtERF2                                                                                 ========== ---->DEAR3(1)                                                                             ------>ZmHOX2a(2) -----DEAR3(1)                                                                           <---------ARR14(2) -----ATERF1(2)                                                                      --------->LBD16 ---->ATERF1(2)                                                                      <---------LBD16 ---RAP2.3(1)                                                                       <---------ANAC46 ----NtERF2                  ---------->ID1                        --------->At4g35610   --------->ARR14(2) ------ATERF1(1)<----------DOF2                                 <---------ZAT2  <----------DOF2 ----LBD16      ------>ZmHOX2a(1)               <-----------GT1 <---------At4g35610<---------LBD16 --->ATERF1(1) --------->TOE2(3)      <---------MYB52(1)*TSS    --------->At4g35610<---------At5g28300   ggcttcttcttcggcatcctttgttttgtttgtcttctccgtttagtttttttctcacctaagctaagctgatgcaaaatcgatttacggggatcggtct  15418300                       ---------->DOF2                      <---------AHL20(2)                   --------->YAB1                 --------->AHL20(2)                 <---------YAB1                     <---------AHL20(2)                 <---------AHL20(2)                --------->AHL20(2)                --------->TOE2(3)                 ----------->TBP              --------->ICU4                    <---------HSFB2a(2)                                 <           <------ZmHOX2a(1)                    --------->HSFB2a(2)                             <----         <---------TOE2(3)                <---------YAB1    --------->TOE2(3)               <-------- =================HOX2a_HOX2a         <---------AHL20(2)  <---------YAB1                    <--------   cagtttgggtttaggaaatattaataaaaggcccttgtatttttatgtttctataaatttatccttgaaaaatacaaaaacaccattcgactcacttttt  15418400   <---------YAB1  <---------TOE2(3) ---------AHL20(2) -----AHL20(2)            --------->ANAC46                                  <---------YAB1 -DAG2                    --------->bZIP60(2)                        <----------DOF2 --DOF2            ---------->DOF2 --------->ZAT6                 <-----------GT1   attttatgttaacaacttggctaaagacacatcactaacaccattcgactcactaaaactatgaaatataactttcacattataggttatagactcgttt  15418500                                                                   <---------At4g35610   <------MYB46(1)                                                                   --------->At4g35610   <------MYB83                                                         --------->AHL20(2)              <---------MYB46(3)                                                         <---------AHL20(2)             <---------AtMYB61                                          --------->YAB1 <---------AHL20(1)            <--------P                                 ---------->DOF2    <---------AHL20(1)                <-------GAMYB          ---------->DOF2--------->ARR11(3)         --------->AHL20(1)               <---------MYB46(3)  --------->ARR11(3)     --------->AHL20(1)       <---------AHL20(1)             --------->ICU4   ---  <---------ARR11(3)     <---------AHL20(1)       --------->AHL20(1)           ---------->DOF2  <----  --------->AHL20(1)     <---------ARR11(3)       <---------ARR11(3) ----------->GT1 --------->ATHB12  <---------AHL20(1)   ------->TEIL      <---------YAB1 --------->AHL20(2)  ----------->GT1     -----   tgaatatttttaaaaagactatatgaatatttttaaaaagactataatacaatatatattaaatttttgagatgaaaatagtaaagatggttggtttgag  15418600              <---------MYB46(3)              <------MYB83              <------MYB46(1)           <------ZmHOX2a(1)                          <---------AHL20(2)         <---------TOE2(3)                         <---------AHL20(1)        --------->YAB1                             --------->AHL20(1)        <---------ICU4                             <---------ARR11(3)     --------->YAB1                      ---------->DOF2  --------->TOE2(3)            ------>ZmHOX2a(1)   --------->AHL20(2)  --------->YAB1 --------------->AGL15                          <xxxxxxxxxxxxxxx -------->GT1<---------AtMYB61        <---------------AGL15                        <---------ARR14(2) -----At4g35610 <--------P         <---------YAB1  --------->ARR11(3)              --------->ARR14(2) ---->At4g35610<-------GAMYB  ----------->GT1----------->GT1                 --------->ARR14(2) <----   atgaaaataataaggatggttgctatgagaaaatgttattcttcaaagggaaatattttttcttaaaacagggattagcgattcgcatcctcttctgtct  15418700                                                                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                            <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                           xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                     <---------At4g35610                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    --------->ANAC58<---------At4g35610                                                                    --------->ANAC58<xxxxxxxxxxxxxxxxsmallRNA(i)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                <xxxxxxxxxxxxxxxxsmallRNA(i)                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                               <xxxxxxxxxxxxxxxxsmallRNA(i)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                             <---------ARR14(2) xxxxxxxxxxxxxxxx>smallRNA(i)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                          xxxxxxxxxxxxxxxx>smallRNA(i)                                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              --     <---------TOE1(2)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------------AtSPL3          --------->ATHB12   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         <-- xxxxxxxxsmallRNA(se3)<-------TEIL           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   --------->At4g35610 ------DOF2 <---------ZAT6      xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <----   ttcttagtacgtttgtgttatagcttcatttcgaatgactggattgtccgaattactcatgtgtatagggaagctaatcgtctcgcagatgaattagcga  15418800  Previous    Next  AGI:  At5g38460.1    Description:  ALG6, ALG8 glycosyltransferase family protein. Identical to Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3- glucosyltransferase [Arabidopsis Thaliana] (GB:Q9FF17); similar to transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G44660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49316.1); contains InterPro domain ALG6, ALG8 glycosyltransferase (InterPro:IPR004856) Range:  from: 15415514    to: 15418256    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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