Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ARR14(2)                            ----------->HVH21                          --------->ANAC58                          --------->ANAC58                          <---------ANAC58                          --------->ANAC46                          --------->ANAC55(1)                          <---------ANAC58                          <---------ANAC55(2)                          --------->ANAC55(2)            ---------->DOF2      <-------TEIL              <---------ATHB12 --------->ANAC58  --------->TOE1(1)          <---------ARR11(3)            --------->WOX13(1) --------->ANAC58  --------->TOE2(1)        --------->ANAC58      -----      ---------->DOF2    <---------TOE2(3)      --------------->AtSPL8    --------->ANAC58      ----- ------>TOE2(3)         <-----------GT1 <---------ARR14(2)    ---------->DOF2--------->CCA1(2)  ----- ------>TOE1(3)--------->YAB1--------->MYB52(1) ------>ZmHOX2a(1)     --------->ANAC46        -------   ccttgaagaaaagtcaatcagaagttttacgtaacgcatgcatatatgtcctcgtactcaaaagaaaagcatacacaagatacattgcatttacacaaac  15392700                                   --------->ANAC46                         <---------WOX13(1)                       <---------ICU4                       -------->HAHB4                       --------->ATHB12                      --------->ICU4                      <---------YAB1                                             <----------DOF2                      <---------ATHB12                                         ------>ZmHOX2a(1)          ----------->RAV1(1)  <-----------GT1                           <---------YAB1 ---->ANAC46         <---------TOE2(3)                              --------->ANAC46 ---->ANAC58       <---------AHL20(2)             --------->AHL20(2)--------->ANAC55(2) ---->ANAC58       --------->AHL20(2)       <----------DOF2         --------->ANAC58           <----- -->MYB52(1)   --------->AHL20(2)--------->ZAT6--------->YAB1       --------->ANAC58           <-----   gaaacgctcgagcaccattaattaatgatggatttacactcgacaactttcattatataaccaagacttcacgttataatcctcttttcatctaaaactt  15392800                     <----------DOF2            ------->TEIL                                           <----------DOF2            --------->GLK1(2)                                <-----------GT1            --------->ARR14(2)                        --------->AHL20(2)            <---------ARR11(1)                        --------->AHL20(1)         <---------YAB1                               <---------AHL20(1)                          ---         <---------ANAC55(2)                          <---------AHL20(2)                         <---       <-----------GT1                          ------>ZmHOX2a(1)  <---------DAG2    <---------MYB52(1) <---------ZAT6   ---------->ID1            XXXXXXXXXXXXXXXXXXXX>MIR865-3P         --------->MYB52(2) ----DAG2--------->ANAC55(2) <------------CBF  --------->TOE2(3)  <---------DAG2   <---------MYB46(3) -----DOF2  <---------ARR14(2)         <---------GLK1(2)<------------CBF          <-------TEIL<------   tttgtgttattacgaatcttgttcttttgaatattgtgttcgattctttcctcaaatttattgtttccccttttttgtgttcgattcgttgctcttacca  15392900                           ---------->DOF2          ---------->DOF2                      <---------------AGL15        --------->YAB1                      --------------->AGL15     --------->WOX13(1)               <----------DOF2               --------->ANAC58                          ------------>CBF            <---------ARR11(3)               --------->ANAC58                   --------->ANAC46 ------>YAB1--------->ARR11(3)             ---------->DOF2 <---------MYB52(1)------->TEIL ------YAB1<---------At4g35610     ---------->DOF2<---------ATHB12       --------------->AtSPL8 ----- ---YAB1   <---------GLK1(1)   ---------->DOF2------------>CBF          ----------->RAV1(2)     <----   ttatagtttttggagctcttttgacttaaaaaagaaagaaagagagaaagcaatcaaagccgttggagactcatacctgtacccataacaacaatacacg  15393000                                                                                  <---------ARR14(2)                                                                                  --------->ARR14(2)                                                                              <-------MYC3                                                                              <-------MYC2                                                                              <-------PIF4                                                                              ------->PIF4                                                                              ------->MYC3                                                                              <-------PIF5                                                                              ------->MYC4                                                                              ------->MYC2                                                                              <-------MYC4                                                                              ------->PIF5                                                                             <---------O2             <---------RVE1(1)                                               --------->O2  <---------YAB1                                                             <---------TGA1a  ----------->TBP                                                            --------->TGA1a -->MYC3    <---------ARR11(3)<---------YAB1            ----------->GT1      ======================== ---MYC3    --------->ARR11(3)<---------AHL20(2)       <---------TOE2(3)    ------->TEIL        <----   ttttataaatgggagatattaagtctgaccatattattccaagttataaaacatgttgatgtaaaaaatgtgtgaatgcacgtggattctatgaagagag  15393100                                                      --------->ARR14(2)                                                      <---------ARR14(2)                                                     <------ZmHOX2a(1)                      <------NtERF2                    ----------->GT1            ------->GAMYB                               ------>NtERF2                   <---------TOE2(3)        --------->MYB52(1)                            <---------bZIP60(1)            <---------ANAC46              --------->MYB46(3)                             --------->RAP2.6(3)            --------->ALFIN1             --------->ANAC46                               --------->MYB52(1)           --------->At5g28300           --------->ANAC58                              ----------->TGA1         <---------DEAR3(1)              --------->ANAC58                      --------->ANAC58        --------->ZAT18                 --------->WOX13(1)                     --------->ANAC46   ---------->DOF2 <---------TOE1(3)  ======================HOX2a_HOX2a        --------->ANAC58 =============bZIP_DOF ---------->DOF2<------ZmHOX2a(2)                        <---------ANAC55(2) -----ZAT2<---------ANAC46           --------->ARR11(3)                       --------->TOE1(2)------   ctcgtgtaagcgcggtgtatgaaggtaaagagagaaatagatcaagcaacggagaggaaactcgaagggaacagtctaaacacgcgagaatgacggcaaa  15393200                                                  --------->ANAC58                                               --------->TOE2(2)                                               --------->TOE1(2)                                              --------->ANAC58                                              --------->ANAC58                                 <-----                                              --------->ANAC46                                 ------                                        <------NtERF2                                          ------                                       ------>NtERF2                                           ------                                      --------->ATERF1(2)                                      ------                                      --------->DEAR3(1)                                       ------                                      --------->RAP2.6(2)                                     <------                                      <---------ATERF1(2)                                    --------                                      --------->RAP2.3(2)                                    --------                                     --------->RAP2.3(1)                                    ---------                                    <---------At4g35610          <---------YAB1             <--------                                    --------->At4g35610         <---------ARR11(3)          ---------                                    <---------ATERF1(1)         --------->ARR11(3)          ---------                ---------->DOF2     ------>NtERF2 --------->ANAC58--------->YAB1            <--------        ------->TEIL               <-----------RAV1(1)         --------->YAB1             ----------- ---->DOF2 --------->DOF5.7(2)   ----------->RAV1(2)          <---------YAB1     ---------->DOF2   agctcggatgaacgtttacaaagagagcatgaaacctctgccgcctaaacgtaagaaatcgttgatgatcataagtttgatgagaaagaaggaagatacg  15393300 ----ANAC55(2) --->ANAC55(2) --->ANAC58 --->ANAC46 --->ANAC55(1) --->ANAC58 -TEIL--------->YAB1                                                                  --------->GLK1(1) ->CCA1(2)                          --------->DAG2            <---------ZAT14         <---------GLK1(1) ->ARR14(1)                        ---------->DOF2        --------->ANAC58           --------->ARR14(2) >ARR11(1)                   ---------->DOF2              --------->ANAC58           <---------ARR14(2) -ARR14(2)               <---------------------WRI1       <---------DEAR3(1)       --------->LBD16 >ARR11(3)          <-----------RAV1(1)   <------ZmHOX2a(1)   --------->ZAT14    <---------LBD16 >ARR14(2)        <---------At5g28300   ------------------------>ANAC81  --------->LBD16 -ARR11(3)       <-----------GT1<----------ID1     ---------->DOF2       ----------->GT1 >ARR10      <---------TOE2(3)--------->DAG2 ---------->DOF2 --------->ALFIN1---------->TaMYB80  ----   caagatgatcaaaataatgttactgttgtcgaaaaggaaaaggaggagaaagagaaaggcacggtgcagaacatcagggaaaatgcggaaatgctctcat  15393400                       <-------MYC4                                           <------MYB46(1)                       <-------MYC3                                           <------MYB83                       ------->MYC2                                           <---------MYB46(3)                       <-------MYC2                                    --------->ALFIN1                       ------->MYC3                      <---------ANAC46    <---------AtMYB61                   <------NtERF2                         <---------ANAC58    --------->ALFIN1                   <---------At4g35610                   <---------ANAC58<------NtERF2                  --------->RAP2.6(2)                <---------ANAC58<---------ANAC46           <----                 --------->ATERF1(1)                 <---------ANAC58<---------ANAC58         <------                 --------->PCF2                  <-------PIF5        <---------ANAC58         <------              --------->ATERF1(1)                ------->PIF5  <---------ANAC58            ----------              --------->ALFIN1                  <---------ANAC58    <---------MYB46(3)     ----------            --------->ALFIN1                   ------->TEIL    <---------ANAC46      <------NtERF2---    --------->ALFIN1<---------ALFIN1     <------ZmHOX2a(1)     <---------ANAC58   --------->ATERF1(1) ----->YAB1<------ZmHOX2a(1)   --------->TOE2(2)<---------ANAC58<----------DOF2   <------NtERF2<-----   caaaatgtgttgaggagtggccgcacatgttaacatatgaagaggaatggacgtggtttgcgtttgcgtttgggtggggatggtggcagcgttatgacgc  15393500                                                                     <---------MYB46(3)                                                                     ----------->GT1                                                                     <------MYB46(1)                                                                     <------MYB83                                                                    <---------AtMYB61                                                                    --------->ALFIN1                                                                    --------->MYB111(2)                                                                    --------->MYB55(2)                      <-----------GT1                               --------->MYB46(2)     --------->At4g35610                 <---------TOE1(3)          --------->MYB111(1) -----DEAR3(1)    <<<<<<<<<<MYB80        <---------TOE2(3)<---------ICU4 ---ANAC46       <------MYB46(1)   --------->ICU4        <---------ATHB12 ---bZIP60(2)    <------MYB83  <---------YAB1   --------->MYB52(2)  <---------MYB46(3) ->TGA1         <---------AtMYB61 <---------TOE2(3)<-----------GT1 <---------MYB55(1) ->HVH21--------->At5g28300 --------->ICU4   ------------>MYB.PH3(2)<---------DEAR3(1) ------>At5g28300----------->GT1 ---------->DOF2<---------MYB46(3) <--------P            <---------YAB1 ----LBD16     <--------P--------->AHL20(2) --------->ALFIN1      <-------GAMYB   <-------TEIL   ggtgatgagcggtaagagttggtttaactaaatattaaagattaaggtgtttgttacaaatcattttgggttggtgaaactatatacatagatgatagtt  15393600  Previous    Next  AGI:  At5g38400.1    Description:  unknown protein Range:  from: 15393076    to: 15393531    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version