Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------AHL20(2)               ------>ZmHOX2a(1)            <----------DOF2          <-----------GT1                --------->ANAC58               --------->At4g35610       --------->YAB1                    --------->ANAC55(2)            <---------At4g35610    --------->YAB1                       --------->ANAC58        <---------ANAC58   <---------YAB1                        <---------ANAC55(2)     <---------ANAC58 <---------AtLEC2   <---------AHL20(2)                    <---------TGA1a        --------->HSFC1(2)<---------ANAC58  --------->AHL20(2)                     ================================================bZIP_DOF --------AHL20(2)                        --------->TGA1a        <---------HSFC1(2)<---------ANAC58 ------->AHL20(2)   --------->YAB1       --------->O2           <---------HSFB2a(1)               --- >YAB1 ----------->GT1                   <---------O2           --------->HSFB2a(1)             -----   tttatataatagtaacattttatcaaaaaaaaaaaaaaaactcacgtcttcctcttaaaaattggatgcttctctgatgcctttgcatgtctatgtcgaa  15383300                                     ---------->DOF2                                --------------->AGL15                                <----------DOF2                       <---------ARR14(2)                       --------->ARR14(2)    --------->LBD16            <---------ARR14(2)  <---------------AGL15            --------->ARR14(2) ==============================================MADS_MADS         <---------ANAC58      ----------------->AGL3         <---------ANAC58      <-----------------AGL3     <---------ANAC58  <---------ARR11(3)  <---------LBD16     <---------ANAC58  --------->ARR11(3) --------->MYB52(1)        <---------TOE2(3) ---------->DOF2       <-----------ARR10 <---------ARR14(2)  <---------------AGL15 ------>TOE1(3)       <---------CCA1(2)  --------->ARR14(2)--------->TOE1(3)              --------->ZAT6 -->TEIL <---------ANAC46    ------>ZmHOX2a(1)             --------->TOE2(3)         <----------DOF2   cctgaaagcttgggtatttgcttcatatctcctcctttttaaagaaccggatgaaataaaaccctaaattaagaaaatcccaactctctttttcactaaa  15383400                                         <------MYB83             <---------YAB1                                        --------->MYB111(1)     <---------ICU4                                        --------->MYB46(2)      --------->YAB1                                        --------->MYB59        --------->ICU4                                       <--------P            --------->YAB1                                    --------->ANAC58        --------->AHL20(2)                          <----------DOF2<------MYB46(1)    <---------AHL20(2)            --------->ARR11(3)      --------->ANAC58     <---------ICU4 <---------LBD16     ---------   atccctacaaaataggtcttggataaaacttttgtagcaaggtaggtttcgaggtttactcattaattatgttttgggggttcttagtccataagatttg  15383500                                                                            <---------ANAC58                                                                            <---------ANAC55(1)                                                                            <---------ANAC58  <------                                                                            --------->ANAC55(2)                                                               <----------DOF2                <------                   <----------DOF2                             <---------DAG2              <-------PIF5           <---------At4g35610                              ------>ZmHOX2a(1)          <---------ZAT18        <---------MYB52(1)                              --------->GLK1(2)   <---------ANAC46  <------      <---------MYB46(3)            <-------TEIL       <---------GLK1(2)   <---------TOE2(3)  <------   <-----------RAV1(1)       <---------YAB1   --------->ARR14(2)          <-----------GT1  ------->PIF5 >ARR11(3) --------->At4g35610 ---------->DOF2<---------ARR14(2) <-----------GT1<---------CCA1(2)   tatttgtgttgttagctctaactttccctctatgaaagttcatgttcgaatccataagattcctactttaccagtttaacgtgtttctttgcacttgctt  15383600                          <------MYB83                                   --------->WOX13(1)                          <------MYB46(1)        <---------ZAT14      --------->ANAC58         --------->YAB1   ----------->GT1     <---------ANAC46        --------->ANAC58     <---------AtLEC2    --------->MYB46(2)   <---------ANAC58------->TEIL    -------->P   <-----------GT1       --------->MYB59      <---------ANAC58<---------AGP1 <-----------GT1        < ---ANAC58         <---------ANAC58        <---------MYB52(1) <---------ARR11(3)                    - ---ANAC46         <---------ANAC58  ------>ZmHOX2a(1)        --------->ARR11(3)                 ---- ---AtLEC2      <----------DOF2      ==================================HOX2a_HOX2a               <--- ---ANAC58  <-----------GT1     <---------GLK1(2)--------->ZAT14------>ZmHOX2a(2)           <--------   ggattttacatgaataacctttcttgtttggtaagattcctcttcgtttcgtgcagagaaaatggatctattaagcaatctaccatacgagcttctttgc  15383700                                                            <---------ANAC46                                                           <------NtERF2                                                           --------->RAP2.3(1)                                                          <---------ORA47(2)                                                          <---------ATERF1(1)                                                         --------->ALFIN1             ------>ZmHOX2a(1)                    ---------->DOF2 ---------ARR11(3)                         <---------ARR14(2) <------NtERF2 -------->ARR11(3)                         --------->ARR14(2)<---------ZAT18 ----------->AGL15                ----------->HVH21      <---------DEAR3(1)                       <-- ------------AGL15   ---------->DOF2   <---------------------WRI1              ---------->ID1     --- --DOF2  ------>ZmHOX2a(1)      <----------DOF2<-----------HVH21   <---------YAB1          --------->ARR11(3)   catatattgtccttccttacaacaaaagaggctgctttgacatcggttctgtcaaagaggtggcgcaatctaattgcatttgtccctaatgttgatattg  15383800            --------->HSFB2a(2)                                                                  ----            <---------HSFB2a(2)                                                                 <----      --------->ARR11(3)                                 --------->At5g28300                 <-------      <---------ARR11(3)                                ----------->GT1                   --------->KAN4(2)     --------->YAB1                                 --------->ZAT14                      <---------MYB46(3)    <---------YAB1    <---------AtLEC2              <---------ZAT14                      <---------KAN4(1) -------ZAT18     <----------DOF2          --------->ARR14(2)                            --------->HSFB2a(1) ------>ZAT18  <---------ARR11(3)          <---------ARR14(2)--------->ZAT6    <-----------GT1 ------   tggaccatgatattcgagagcttttcatggattttgttgatagagtattggcattgcagggtaactctcccattaacaaattttccctcgattgttccgg  15383900                                                                                --------->ARR11(1)                                             --------->ALFIN1                   --------->ARR14(2)                                           <---------ANAC58                     <---------ARR14(2)                                          <-------TEIL                   <----------DOF2                                          <---------MYB46(3)       <---------YAB1                           <-------TEIL  <---------ANAC46         <-----------GT1--------->ARR14(1) ----->ALFIN1             --------->CCA1(2)<---------ANAC46     <---------AHL20(2) -----MYB52(1)           <---------ARR14(2)<---------ANAC58     --------->AHL20(2)            ------- --LBD16           <---------MYB46(3) <---------AtMYB61--------->LBD16 <---------ATHB12       <------ --->LBD16  <---------ANAC46   <---------GLK1(2)   <---------ARR14(2)--------->WOX13(1)  <---------HSFB2a(2)   tgttgattcggatagagtggattgttggatacagaatgtgatggtgcgtggtgtttccgagcttaatttatcaatctttgtggattcggttttcgaagat  15384000                                                                       <------MYB83                                                                       <---------MYB46(3)                --------->DAG2                                      <-------GAMYB               ---------->DOF2                                     <---------MYB46(3)            ----------------->AG                                   --------->ATHB12         <----------DOF2                                        <---------ANAC58   --------->YAB1                                               <---------ANAC58              <------ -->At4g35610--------->HSFB2a(2)                      ----------->GT1<--------P       <---------ANAC58 ---At4g35610<---------HSFB2a(2)                      <---------TOE2(3)<------MYB46(1)<---------ANAC58   gactataatctctttccaaaagtgtttgagaacaaaaaactagttaagctcggattaagttatatttcttggttggatgggagcattttcttaccaatgc  15384100                                                                                               ------                                                                                            ---------                                                                        <----------DOF2     ---------                                                             <----------DOF2 <------ZmHOX2a(1) <-----                                                    <<<<<<<<<TBF1<---------ANAC58        --------->YAB1                                                --------->GLK1(2)----------->RAV1(2)   <---------YAB1 ---ATHB12           <---------MYB52(1)        <---------GLK1(2) <---------ANAC58      --------->ICU4   ttaaaacactcgttcttgaatcagttttgttatctgttgagaagtttgagattcttcttcatgctttgcctgcgcttgaggaattagtcatgaataatat  15384200  Previous    Next  AGI:  At5g38390.1    Description:  F-box family protein. Identical to Putative F-box protein At5g38390 [Arabidopsis Thaliana] (GB:Q9FF23); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G38386.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 15383662    to: 15385283    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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