Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------YAB1                                   <----------DOF2            --------->ICU4                        <---------YAB1                        <---------YAB1                      --------->CCA1(2)          <---------YAB1<--------ATHB1                   <---------TOE2(3) <-----------GT1        --------->YAB1  <------ZmHOX2a(1)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------WOX13(1)---------->DOF2 ------ATHB12--------->MYB46(3) <-----------GT1<---------AtLEC2--------->ATHB12   tcggttctctatcgaaccattaagttatgagttttctctttacaattttgtatgaatgactagaatgattgtgaaagaggagagcaatctcgagttatct  15362300                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                      <---------ANAC55(2)                         --------->YAB1                               --------->ANAC55(2) <---------AHL20(2)                   --------->YAB1                             <---------ARR14(2)         --------->AHL20(2)             --------->ANAC55(2)                              --------->ARR14(2)         <---------AHL20(2)             <---------ANAC55(2)                             <------ZmHOX2a(1)         ------->TEIL         <-----------HVH21  --------->YAB1    ------->TEIL<---------LBD16         <------ZmHOX2a(1)   aaattttgttttgtcacttgttcataacaataacatttttgtgctacgaatgtcaaaatttcaggatttgttaagtattagagaggatgaatttaatagt  15362400                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                            ---------                                                                                    <---------AHL20(2)                                                                                   <---------AHL20(1)                                        <---------AHL20(2)                         --------->ARR11(3)                              <---------AHL20(2)       ----------->GT1             <---------ARR11(3)                  <---------YAB1       <---------AHL20(2)                     <---------ANAC46  -----               <---------AHL20(2)      --------->AHL20(2)               --------->ICU4    <---------TOE2(3)   tttttttgtttttgtgttttatttttgggtttttaatagaatttaatagttcatgtattgtttaatacaatgtcaaaattgtgtatatatttaagaaaga  15362500            <---------ZAT18            --------->ZAT14            --------->ZAT18            <---------ZAT14           <---------ZAT6          <---------------AtSPL8    <---------AHL20(2)    --------->AHL20(2)   --------->AHL20(2) -------->AHL20(2) --------YAB1                                        <---------ICU4 --------AHL20(2)      <---------AHL20(2)           --------->ICU4          <---------ANAC58 ------CCA1(1)        --------->AHL20(1)       ----------->GT1              <---------ANAC46 ------RVE1(1)        <---------AHL20(1)     --------->YAB1                 <---------ANAC58 -----ARR11(3)      <---------AHL20(1)      <---------ATHB12             <---------TOE2(3)       ---- ---->AHL20(1)      --------->AHL20(1)   <---------WRKY12           --------->ICU4               ---- ->DOF2   --------------->AtSPL8         <---------WRKY38(1)   ----------->GT1                   ---- ---->ARR11(3)     --------->AHL20(2)   --------->WRKY18(1)--------->WOX13(1)                 <------   tattatttaattagtgtacaaatatatatttgtaaacttatggtcaatgatgtaaaaatttcaattagtaattttgaggcttgttttttttttagattca  15362600                                                 ------>ZmHOX2a(1)                                          <---------ANAC55(2)                                          --------->ANAC55(2)                                          <---------ANAC58                 ------>ZmHOX2a(2)                   <---------HSFB2a(2)    <---------ANAC58                *TSS            --------->ZAT18               --------->ANAC46        ------------>CBF            <---------ZAT18         ------>MYB83 ======================HOX2a_HOX2a              ----- ----->ANAC46      --------->HSFB2a(2)  <-----------GT1          ------>ZmHOX2a(2)              <---- ----->ANAC58  <---------ANAC58     ------>MYB46(1)             <------ZmHOX2a(2)         --------->ARR11(3) ----->ANAC58  <---------ANAC58   <---------MYB59=================================HOX2a_HOX2a <------ -TEIL<----------DOF2      ------------>CBF      =======================HOX2a_HOX2a       <---------ARR11(3)   agccacttctttagtgggcttatcgaaggcccaataccaaatttacgtctcctctctctctctccgatctcaatagatcgctggagttgagagagcttcg  15362700                                                            --------->ARR11(3)                                                            --------->GLK1(2)                                                            <---------ARR11(1)                                                            <---------ARR11(3)                                                            <---------ARR14(2)                                                            <-----------ARR10                                                           <---------CCA1(2)                                                       --------->AtLEC2                                                       --------->ANAC46            ----------->HVH21                          --------->ANAC58          <---------ANAC58                             --------->ANAC58    --------->REM1(1)          <---------ANAC58                         <-----------HVH21      <-------TEIL        -------     <---------ANAC58                      <-----------HVH21--------->ARR14(2)                <------     <---------ANAC58                  ------>ZmHOX2a(1)   --------->GLK1(1)            --------->GLK1(2) ---->HSFB2a(2)             <---------HSFC1(2)   --------->ZAT2     <---------ZAT14    <---------GLK1(2) -----HSFB2a(2)           <---------ARR14(2)     --------->At4g35610<---------At4g35610--------->ARR11(3) ---LBD16--------->MYB52(2) --------->HSFC1(2)   <---------At4g35610--------->ZAT14  <---------YAB1   ggacttcgcgttccttgacgaagaagacgatacttcttctccttccatcacagcttcacgcaaatctttctgcagttacatcttcttaagattctgagtt  15362800                                                                                                   --                                                                                           <---------                                                                                          <---------bZIP60(1)                                                                                          <---------REM1(1)                     <---------YAB1                 <---------HSFB2a(2)                   <---------bZIP60(2)         <---------LBD16                      <---------AHL20(2)                     --------->YAB1--        <---------ANAC46                     <---------AHL20(2)                --------->LBD16  -----        <---------ANAC58                     --------->AHL20(2)     <---------ANAC55(2)   --------->bZIP60(1)        <---------ANAC58                 <---------AHL20(2)         --------->ANAC55(2)   <---------- -->GLK1(1)      --------->ARR11(3)     <---------AHL20(2)     --------->YAB1  ------>NtERF2   <----- ---GLK1(1)     <------ZmHOX2a(1)       --------->AHL20(2)     <---------ICU4<---------LBD16  ------>NtERF2   ccgacttatttcgtggaaggattttgatatttcaacagtgattttaattttatactggaacttaagcatcacttaatcttccggctaaaatgatgtcgcc  15362900                     <---------ARR14(3)                     --------->ARR14(3)                     <-----------ARR10                     --------->GLK1(2)    <-----------ARR10--------->ARR11(3)    --------->ARR14(2)             <---------At4g35610 <-----------GT1    <---------ARR14(2)<------ZmHOX2a(2)             <---------DAG2   <---------CCA1(2) <---------ARR14(2)         <---------MYB59 ------->ANAC58      --------->ARR14(2)        --------->ANAC58                               <------ --HVH21             <---------ARR11(3)        --------->ANAC46                     <---------AtMYB61 ------->ANAC58     <------ZmHOX2a(1)          --------->ANAC58                   --------->ALFIN1 ---->DEAR3(1) <------ZmHOX2a(2)  <---------------AtSPL8                        <---------ANAC58 -RAV1(1) ------>NtERF2------>ZmHOX2a(2)--------->TOE2(3)                       <---------ANAC46 -NtERF2 --------->DEAR3(1)       --------------->AtSPL8        <-----------GT1 <---------ANAC58   gaagcaaatctccgacgatcgaggatcttcacatttcaggtaccttcatacccaatttttccattaaaacctctctgctattgtgtgtggtttcttcttt  15363000              --------->LBD16                                       >>>>>>>>>>>>>>>>>LFY             <---------ANAC58                              <<<<<<<<<TBF1             <---------ANAC46                        --------->HSFB2a(1)       --------->ATHB12                              <---------HSFC1(2)          --------->ATHB12      <---------YAB1                                 --------->HSFC1(2)         <-------TEIL<-------- ----DOF2    <---------ANAC58                        <---------HSFB2a(1)        <---------YAB1   tgctagttttgatttgcgtagaaatcaaatgagaaaaatcaaaaatcaagaacgaagtttcttcttcttgctccaatggagtttcattgaaattacaaca  15363100                                                                                    --------->ARR11(3)                                                                                  ----------->ARR10                                                                                  <---------TOE1(3)                                                <------MYB83                      <---------TOE2(3)                                                <------MYB46(1)                   <---------YAB1                                               --------->MYB111(1)           <------MYB83                                           <---------ICU4                    <------MYB46(1)                                          <---------YAB1                    <---------TOE2(3)                       --------->LBD16    --------->ICU4                <--------HAHB4                       ------>ZmHOX2a(1)--------->YAB1                  <---------ICU4            <---------ANAC58       ----------->GT1                      --------->ATHB51            <---------ANAC58  ---------->DOF2  <---------TOE2(3)       <---------YAB1         <---------MYB52(1) --------->ARR11(3) --------->MYB59         --------->ICU4        <-------GAMYB<---------LBD16   >>>>>>>>>MYB98       --------->ATHB12--------->MYB59  -------- --ID1 <-----------RAV1(1)  <---------ARR11(3) --------->MYB46(2)    --------->YAB1 <---------ARR11(3)   aaatgtgttctgttgcttcattttcctgaagataatgcagtaacataattaggtagaatcactgatttgagtcataattaggttaagattttagttcatt  15363200  Previous    Next  AGI:  At5g38380.1    Description:  similar to cation efflux family protein [Arabidopsis thaliana] (TAIR:AT2G04620.1); similar to hypothetical protein OsJ_022901 [Oryza sativa (japonica cultivar-group)] (GB:EAZ39418.1); similar to hypothetical protein OsI_024738 [Oryza sativa (indica cultivar-group)] (GB:EAZ03506.1); contains domain Multidrug resistance efflux transporter EmrE (SSF103481) Range:  from: 15362674    to: 15365657    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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