Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <---------GLK1(1)                                                                   <---------WOX13(1)                                                               <---------MYB111(1)                                                               <---------MYB59  --------->ARR14(2)                 <----------ID1           --------->ANAC55(1) ------->YAB1         ------>MYB46(1)----------->GT1      <-----------GT1 -->AHL20(2)          -------->P    ----------->GT1  <------MYB83------>MYB83                     <-- -------AGL15         ------>MYB83---------->DOF2    <------MYB46(1)   <-----------GT1        <------ ------>AGL15       <---------MYB111(1)       ---------->DOF2 --------->ANAC46               <------- --DOF2        <-----------GT1<---------AHL20(2) --------->ATHB12------>MYB46(1)       ----------->HVH21   atagtattctctataatttacacctactctatataaaaaaggaaaaaaaaaagattggttttacacctaattgataccccttaagaagactgaccgctat  15342700                                                                                                <----                                                                                               ------                                              --------->ALFIN1                                 <-----                               <---------YAB1 <-----------RAV1(1)                            --------                    <----------DOF2           <---------ANAC58                             <---------                   ------>ZmHOX2a(2)          <---------ANAC46                             --------->MYB46(3)                 --------->ARR11(3)       <---------ANAC58                                 <---------MYB111(1)       ---------->ID1    <---------AHL20(2)   <---------ANAC58                             <---------MYB52(2) ---------GT1    <---------ARR11(3)       <---------ANAC58     <---------ANAC58            <---------MYB46(2) ----DOF2<----------DOF2<---------AHL20(2)<---------ANAC46     <---------ANAC58 <---------AHL20(2) --MYB52(1)  --------->ANAC55(2) <----------DOF2      ----------->GT1  --------->TOE2(3)   ==========   ttagcatttgtctttaagtgatcttttttatttatctttgtttgacttgtgtggctaagtaatatgcgtcttaccttcgtatttcattgtctaactaacg  15342800                                                                  --------->ANAC46                         ================================HOX2a_HOX2a    --------->ICU4       ------>ZmHOX2a(2)                        --------->ANAC58 -------TGA1         <---------YAB1               <---------------AGL15        <---------ANAC58     < --->TGA1a         --------->YAB1                 <----------DOF2 --------->ANAC58                 -- ----TGA1a       <---------WOX13(1)               ------>ZmHOX2a(1)    --------->REM1(1)           <- ->MYB52(1)   <---------TOE2(3)            --------->AHL20(2)   <-----------GT1<---------ANAC58  ---- ---MYB.PH3(2)<---------TOE1(3)         --------->TOE2(3)      --------->ARR14(2)               <---- ====MYC_MYB  <---------YAB1           ----------->GT1         <---------ARR14(2)  <-----------------AGL1   tctgcaattttggtttaagattgatgatcgctccattttcagcgttaaaatccttttctaagaaatatacgctacatcgtttcgttccatcttcggcatt  15342900             <---------HSFC1(1)                                                                    --     <----------DOF2       <------ZmHOX2a(1)       --------->CCA1(2)                             ----  <---------YAB1      --------->MYB52(1)          --------->ARR14(2)                       <--------- ---------ICU4        <-----------GT1             <---------ARR14(2)                <---------ANAC58 ------->ICU4<---------HSFB2a(2)                  --------->ARR11(1)    <------------CBF <------MYB46(1) --------YAB1--------->HSFC1(1)                   <---------GLK1(2)    --------->ATHB12  <------MYB83 ----->YAB1  --------->HSFB2a(2)                  <---------ARR11(3)  <---------YAB1<---------ANAC58 ---TEIL     ------>ZmHOX2a(1)                    --------->ARR11(3) <---------GLK1(2)  --------->MYB59   cattattcttttttcctagaaaattaacaggattagtttttttttcttacaagatttgcccattatacacagattattgaacagttgagttcggtttaag  15343000                                                                                                   --                                                                                              ------>MYB83                                                                                              ------>MYB46(1)              <---------ICU4                                 *TSS                            --------             --------->AHL20(2)                     --------------------->WRI1              ---------            <---------YAB1                    --------->HSFC1(2)                            ------->GAMYB          --------->YAB1                      <---------HSFB2a(1)                          <---------MYB52(2)          <--------HAHB4                      <---------HSFC1(2)                           --------->MYB46(3)    ------->TEIL                              --------->HSFB2a(1)                          <---------MYB55(2) <---------ATHB12                            <---------TOE2(3)                            --------->ANAC58 ------->WOX13(1)           <-----------TBP  <---------TOE1(3) --------->TOE2(3)  --------->HSFB2a(2) -------->CBF<---------AHL20(2) <---------AHL20(2)  <----------DOF2    ---------->DOF2    --------->ANAC58 -DOF2   <---------YAB1--------->ALFIN1 <----------DOF2     <---------CCA1(2)     <---------HSFB2a(2)   tcaatgaatctattattaattccaagtgggatatataatgttctttgaaggttcctttgtgcctatctcaaataaaagcattttccagactcaaccaaca  15343100                              <----------DOF2                             <---------ANAC58                             <---------ANAC58     <----------DOF2      <---------WOX13(1)                               --------->At4g35610    <---------DAG2  <-----------GT1                                        <---------At4g35610 -------->DOF2  --------------->AGL15           --------->ARR11(3) --------->YAB1      <----------DOF2 --->RAV1(1)    <----------DOF2                 <---------ARR11(3)<---------YAB1<---------GLK1(2) >AtMYB61    <---------ARR11(3)           <----------DOF2<-----------GT1 <-----------RAV1(2)   aaaaagccttttcaatttctttttacagattgctttctgaatagctttgagatattgattttctcttcatcatactcagatggattcttcttttctctct  15343200                                            <---------ARR11(3)               <---------ATHB12                                            --------->AHL20(1)         <---------ARR14(2)                                            --------->AHL20(2)         --------->ARR14(2)            ------>NtERF2                   --------->ARR11(3)        --------->GLK1(1)         --------->ZAT2                     <---------AHL20(2)        <---------GLK1(1)         <---------ZAT2            --------------->AtSPL8         ----------->GT1         <---------At4g35610       --------------->AtSPL3        --------->DAG2         --------->At4g35610   <----------DOF2             --------->HSFB2a(2)      <---------At4g35610    --------------->AGL15         <---------HSFB2a(2)  --------->ANAC58     <-----------RAV1(1) --------->ZAT14    <---------AHL20(1) ---------->DOF2  --------->ANAC58   ggtttttgtgctgctgccataaccttcttcactcttttcggtacaatatatttcatgttttatagaaaaggcaaatcccatcaagaaaacaaaacaatag  15343300                                                                                    <---------ARR11(3)                                                                                    <-----------ARR10                                                                                    --------->ARR11(3)                                                                                   <---------At4g35610                                                                                  ----------->ARR10                                                                                 <-----------RAV1(2)                                                                             ------->PIF5                                                                             <-------PIF5                                                ----------->GT1             --------->ANAC46          <---------ARR11(3)                   --------->ANAC58             <---------O2          --------->ARR11(3)      <----------DOF2 --------->ARR14(2)        --------->O2    --------->TOE2(3)   --------->ANAC46       --------->ANAC58            <---------LBD16        <--    <----------DOF2 <---------At4g35610      --------->MYB52(1)      --------->ZAT2--------->At4g35610   cttcttctttaatatctatttcatctactccatcttctttacctcgaaaacggaaacacgatgtcttccctagcttccacggggcagatgttcgcaaaac  15343400                                                           --------->ARR11(3)                                                          --------->YAB1                                                       --------->YAB1                                                       <---------ICU4                ---------->DOF2                     --------->YAB1              ------>ZmHOX2a(1)                   <---------WOX13(1)                      <---------At4g35610 <---------ANAC58                      <---------MYB46(3)<---------YAB1                   --------->At4g35610 <---------ANAC58        ---------->DOF2        --------->ATHB12                       ------>ZmHOX2a(1) --------DOF2--------->TOE2(3) ---------->DOF2 <---------ATHB12      <------ZmHOX2a(1) ==============   ctttcttgctcacatcctaaaagagttcaaagggaaaggagtcgttccattcattgataatgatatcgagaggagcaagtctatcggtcctgagctcata  15343500                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                    ------>ZmHOX2a(2)                   <------ZmHOX2a(2)                  --------->ARR14(2)                                                <---------ARR11(3)                  <---------ARR14(2)                                                --------->ARR11(3)                  <---------ARR11(3)                                         <---------MYB46(3)                  --------->ARR11(3)                                         <------MYB83  <---------ANAC46             ------>ZmHOX2a(2)                                               <------MYB46(1)           --------->ARR14(2)                                               --------->MYB111(2)           <---------ARR14(2)                                               --------->ALFIN1  <------          =======================HOX2a_HOX2a                                <---------MYB46(3)-------          =================HOX2a_HOX2a                <<<<<<<<<TBF1         <---------AtMYB61--------          ======================HOX2a_HOX2a    <---------YAB1               --------->MYB55(2)-------          ================HOX2a_HOX2a  --------->ANAC58                     --------->MYB111(1)          <------ZmHOX2a(1)            --------->ANAC46                    <--------P<------ZmHOX2a(2) ===================HOX2a_HOX2a        --------->ANAC58           <----------DOF2  <---------GLK1(1)   gaagctattagaggatcgaagatcgcgatcgtcttgctctcaaggaactatgcttcttcttcgtggtgcttaaacgagttggtggagatcatgaagtgta  15343600  Previous    Next  AGI:  At5g38344.1    Description:  transmembrane receptor. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G38340.1); similar to disease resistance-like protein 9 [Brassica rapa] (GB:AAV88086.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 15343061    to: 15344218    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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