Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------AHL20(1)                                                                                --------->AHL20(2)                                                                                --------->AHL20(1)                                                                       --------->YAB1<---------AHL20(1)                                                                       <---------ICU4<---------AHL20(2)                                            <----------DOF2           <---------ATHB12                                      <-----------GT1                 --------->ICU4--------->AHL20(2)                                    <---------ARR11(3)     --------->YAB1       <---------AHL20(2)         --------->AHL20(2)         --------->ARR11(3)     <---------ICU4<---------YAB1     <--------         <---------AHL20(2)         --------->AHL20(1)    <---------ATHB12   --------->AHL20(2) -----AHL20(2)                   --------->AHL20(2)     --------->WOX13(1)--------->YAB1--------->AHL20(2) --->AHL20(2)   <-----------GT1--------->AHL20(2)---------->DOF2    --------->GLK1(1)--------->AHL20(2)   aaaatttgaatataaattttacattctttcaaaaaaaatatatccactttcaaaagttcaatcaatacagaaatcattataaaatattaaatttatacat  15337300                                                                                 --------->YAB1                                                                                 <--------ATHB1                                                                                <---------ATHB12                                                                                <---------ATHB51                                                                          ------>MYB46(1)                                                                          ------>MYB83                                                                        <---------MYB111(1)                                                                        <---------MYB59                                                                       --------->ANAC58                                                                       --------->ANAC46                                     ----------->RAV1(1)               --------->ANAC58                         <---------AHL20(2)<---------AHL20(2)          --------->ANAC55(1)                       <---------ANAC55(2) --------->AHL20(2)        <---------ALFIN1   <---------AtLEC2    --------->ANAC55(2) <---------AHL20(1)      --------->ANAC46 ---GT1        ----------->GT1      <----------ID1          ----------->GT1 <---------ATHB12   tatttgcataaaaaaacttgtaaatacttaattgttatgcaacaaaaaatttgttcaaggagtagtaacacacacctaatcaataatagaatttagagat  15337400                                                          ------>ZmHOX2a(1)                                                          --------->ICU4                                                         <---------------AGL15                                         <---------ARR11(3)                                         --------->ARR11(3)                           ------->GAMYB                                        --------->YAB1   --------------->AGL15      <---------At4g35610                                       <---------ATHB12 <-----------------AG       <-----------GT1                                     ------>MYB83       ----------------->AGL1    <-----------GT1               ---------->DOF2    --------->ANAC55(1)   <-----------------AGL1<---------AHL20(2)    <         --------->ANAC55(2)  <-----------GT1 <-----------GT1                --------->ICU4        <-     <---------DAG2   <------MYB46(1)------>MYB46(1)    <-----------------AGL2--------->AHL20(2)  <--     <----------DOF2  <------MYB83--------->ANAC46     ---------->ID1   ----------->GT1   <----------DOF2   ttgtctactttatgtaacaaagataggttttattacacctaatgatatttagcatttgtccttatttggacaagttgtaattttttaactgactttctta  15337500                                <----------DOF2                          --------->WRKY18(1)             <----------DOF2--------->KAN4(2)                    <---------ICU4 <---------YAB1        <---------At1g77200                   --------->AHL20(2)                 <---- ------------CBF       <---------DREB2C(2)                ----------->GT1               <-------GAMYB --------AHL20(2)    <-----------HVH21                   <---------YAB1                <-----------RAV1(1) -------AHL20(2)    <-----------RAV1(1)            ------------>CBF          <---------ARR14(2)<-----   tttattgttgtttgacttttatgtgtcggtcattctttatcagtttttccaaaaacaatatgattaaaaattacaagtagatcgagagactgttgcagat  15337600                                                                                       <----------DOF2                                                ---------->DOF2                       <---------ANAC58                                            ------->GAMYB                             <---------ANAC58                                           <---------MYB52(2)                <-----------GT1                                      --------->CCA1(2)          ------------>CBF  <---------WOX13(1)                                     --------->ARR14(2)  --------->DAG2  --------------->AGL15                          <---------ICU4   --------->MYB46(3)  <----------DOF2    <------------CBF -----WOX13(1)       --------->AHL20(2)<-------TEIL <----------ID1    <---------ARR11(3) -------CBF      ----------->GT1     <---------ARR14(2) ---------->DOF2  <----------DOF2           <-   tgctcttaaatgacttatctcgataaaatcattttttcagatacaacaaacaaagagaaaaagccctttcaatttctttttacagattgctttctaaata  15337700                                                                                            ---------                                                                                     --------->ANAC46                                                                                     --------->ANAC58                        --------->YAB1                                            <---------REM1(2)             ------>ZmHOX2a(2)                                                <-----------GT1           <---------ARR11(3)                                             <---------ICU4<----------DOF2           --------->ARR11(3)                                             --------->ATHB51  ---------       <------------CBF<---------YAB1       <----------DOF2              --------->ICU4 <---------DAG2 ---------DOF2     <----------DOF2   <---------GLK1(2)                 --------->YAB1--------->ANAC58   gctttgagaaattgatcttctctttatcatactcaaatggattcttcttttctctctagtttttgtgctacagccataattttcttcacgcttttcggta  15337800                                                                                                    - --------->AHL20(1)                                                                                 - <---------AHL20(2)                                                                                 < --------->ARR11(3)                                                                             ----- <---------ARR11(3)               <---------ATHB12                                             ------ <---------AHL20(1)   ----------->GT1                                                          ------ --------->AHL20(2) ---------->DOF2                                                           <------ ------>AtSPL8  --------->HSFB2a(2)  --------->ANAC58            <---------At4g35610          ------- ------>AtSPL3  <---------HSFB2a(2)  --------->ANAC58        <----------DOF2            <----------DOF2   caatatatttcatgttttatagaaaagtcaaatcccatcaagaaaacaaaacaatagcttcttctttagctcttccaactattccatcttctttgtcccg  15337900                                <---------ARR11(3)                                <-----------ARR10 -------->ARR14(2)           <-----------RAV1(2) -------->TOE1(2)           --------->At4g35610 ---------ARR14(2)      --------->ANAC46 ---->LBD16            <---------LBD16 --->LBD16         <---------ARR14(2)                           ---------->DOF2                     - ----->GT1<----------DOF2   <---------At4g35610           ------->MYC3        ---------->DOF2     <-- ---HSFB2a(2)      --------->ARR14(2)                     <-------MYC3      --------->ANAC58    ----- -->HSFB2a(2)  --------->LBD16  --------->ARR11(3)<----------DOF2           --------->ANAC58   <-----   aaaatacgatgtctttccgagtttccacggagcagatgttcgcaaaacctttctttctcacatgctaaaagagttcaaacgaaagggaatcgttccattc  15338000                                                                          --------->YAB1                                                                         <---------ATHB12           --------->ETT(2)                                       <---------ARR11(3)       --------->ARR11(3)                                         --------->ARR11(3)      --------->YAB1                               <-----------HVH21------>ZmHOX2a(2)     <---------YAB1                            ------->TEIL   ---------->DOF2   --------->YAB1                           --------->ANAC46<------ZmHOX2a(2)   <---------ICU4                     <---------ZAT2      ================HOX2a_HOX2a -------->YAB1                        --------->At4g35610 =================HOX2a_HOX2a -------WOX13(1) <------ZmHOX2a(1)    --------->ZAT2      <------ZmHOX2a(1)<-----------TGA1 ---->ATHB12  <-----------RAV1(2)  ------>ZmHOX2a(1) --------->YAB1<------ZmHOX2a(2)           <----- ----ATHB12<---------ETT(2)        ================================HOX2a_HOX2a        ---------->DOF2   attgataatgatatcgacaggagcaagtctattggtcctgagctcgacgaagctatcagaggatcaaagatcgcaatcgtcatgctctcaaagaactatg  15338100                                                                                                -----                                    --------->ANAC55(2)                                       ------>MYB83                                    <---------ANAC55(2)                                       ------>MYB46(1)                                    --------->ANAC46                                          -------                                    --------->ANAC58                                          =======                                <---------ARR11(3)                                            -------                                --------->ARR11(3)                                          <--------                               <---------GLK1(1)                                            ---------                         <------MYB83                                                      --------->ANAC46                         <------MYB46(1)                                                 <---------WRKY18(1)                        --------->MYB55(2)                                              --------->WRKY45                        <---------AtMYB61                                               ----------->HVH21                        <---------MYB46(3)                                              --------->WRKY12                        --------->ALFIN1 ----------->GT1                                --------->WRKY38(1)             ----------------->AGL1 --------->ANAC58--------->CCA1(2)                  --------->DOF5.7(2)      <---------ICU4    --------->MYB111(2)        --------->ARR11(1)                 <-------GAMYB      --------->YAB1    --------->MYB111(1)      ----------->ARR10                   <---------ANAC58     <---------YAB1    <--------P<------ZmHOX2a(2) <---------ARR11(3)                <---------ANAC46 ----YAB1   ------>NtERF2<---------MYB46(3)    ---------->DOF2     --------->YAB1    <---------ANAC58   cttcttcatcatggtgcctaaacgagttggtggagatcacgaaatgtagaaaagatttgaatcaaacagtgatgaccattttctatggcgttgacccaac  15338200  Previous    Next  AGI:  At5g38340.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G38350.1); similar to RPP1 (RECOGNITION OF PERONOSPORA PARASITICA 1) [Arabidopsis thaliana] (TAIR:AT3G44480.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G65850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70119.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA+ ATPase, core; (InterPro:I Range:  from: 15337737    to: 15341291    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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