Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --    ----------->RAV1(2)                                  <---------DAG2                           --- ------->ANAC58                                 --------->MYB52(1) <---------GLK1(2)              <-- ------->ANAC58                            <------ZmHOX2a(1)  --------->TOE2(3)          <----------- ------->ANAC46                          <---------TOE2(3) <-----------GT1               ------------ ------ID1   <---------YAB1       ----------->GT1        <----------DOF2           <---------ARR11(3)   gacgaaacctgactcttgatagaattcgaaccggtcgagttataaggaagtaatggcaactttacctcatattcttggtctccaatttcttctatttcaa  15333700                                                                                            <--------                                                                                           ==========                                                                                           ------>ZmHOX2a(2)                                                                                          ===========                                                                                          <------ZmHOX2a(2)                                                                                         --------->ARR11(3)                                                                                         <---------ARR14(2)                                                                                         <---------ARR11(3)                                                                                         --------->ARR14(2)                                                                                      --------->LBD16          --------->GLK1(2)                                                          --------->ANAC55(2)          --------->ARR11(3)                                                         <---------ANAC55(2)          --------->ARR14(3)                                                         <---------HSFB2a(2)          --------->ARR14(2)                                                         <---------LBD16  ----------->GT1                                                                    <---------ANAC46 ------->MYB52(1)                                                                    --------->HSFB2a(2) ------>ARR14(2)                                                                    <---------LBD16 -------ARR14(2)--------->ATHB12                                                  --------->ARR14(2) ----AGL15<---------ARR11(3)      --------->ALFIN1                <-----------GT1 <---------ARR14(2) --->AGL15<---------ARR14(3)   <---------TOE1(2)          <-----------GT1   --------->CCA1(2)   gaaccggttcaaaatcttcgattggaattatctcaggtctgggtaaaccggttttatatttatctgttttactacgatatatgggttccgggatcttttt  15333800                                                   <---------GLK1(1)                                                   --------->GLK1(1)                                              <-----------RAV1(2)                                           ------>NtERF2                                          ----------->HVH21                                          --------->LBD16                                          --------->DEAR3(1)                        <-------GAMYB     --------->WRKY12                       <---------MYB46(3) --------->WRKY38(1)                      <------NtERF2      --------->ANAC46               <---------LBD16                     <---------RAP2.6(3)--------->At4g35610        --------->ZAT18                     ------>NtERF2      <---------At4g35610        <---------ZAT14             --------->ARR14(2)         <---------LBD16      <------NtERF2  <---------ANAC46             --------->ARR11(3)         --------->LBD16     --------->LBD16<------NtERF2          ---             <---------ARR14(2)        <---------ANAC46    --------->DEAR3(1)                     --- --DOF2     <------ZmHOX2a(1)         <---------LBD16     <---------LBD16 --------->LBD16        <--- ==================HOX2a_HOX2a <---------ARR11(3)  --------->At4g35610 --------->DEAR3(1)       ----- ==================HOX2a_HOX2a --------->ARR11(3)<------ZmHOX2a(1) <---------ABI4(2)       ----------   catttctatagggaggattttgccgtcgttgaagaactcttccgcggaccaggagctctcgccggagattgcaccgcggggtattgaaaactccaaagga  15333900                                                    <---------WOX13(1)                                                  --------->ATHB12                           --------->LBD16    <---------ZAT2                         <---------LBD16      --------->ZAT2                       <---------SPL7      <---------At4g35610                      --------->YAB1      --------->ANAC46 ------>ANAC58       <---------YAB1      ------->TEIL <------MYB46(1) ------>ANAC58     --------->GLK1(1)     --------->ZAT18                        --------->TOE2(3) ------GLK1(1)     <---------GLK1(1)   <---------SPL7 <------MYB83     <------NtERF2 ----->DOF2       <---------ARR11(3)  <---------REM1(1)           --------->ALFIN1           <------- >DOF2            --------->ARR11(3) <---------------AtSPL8     <---------O2   ----------->GT1-------   aagccccaatagaagttggagatatcatacggagattgtgatgtacgctgctcgattggtatggactcgtggtggcaaaaatcgttagaaaatgagattc  15334000                           <---------YAB1      --------->ICU4                         ----------->GT1       <---------AHL20(1)                  <---------LBD16              --------->AHL20(1)                  <---------ANAC46             --------->ARR11(3)                                   -                  <---------ANAC58       <---------HSFB2a(2)                                   ------               <---------ARR14(2)        --------->HSFB2a(2)                                   <-----               --------->ARR14(2)      --------->HSFB2a(2)                               <-----------TBP   <----------DOF2<---------ANAC58     <---------HSFB2a(2)                            <----------DOF2 --GLK1(2)  <---------ANAC58     <---------TOE2(3)              *TSS         --------->At5g28300    < -->GLK1(2) <---------ANAC58  <---------YAB1   <---------ARR11(3)           ----------->GT1    ------   ttggactttcattagcgttttcgggcattgttattaatgttctcgagaaaatattagagggtttgaagaaaatggtgatggtaaaactcttttttatacg  15334100                                                            <------MYB83                                                            ----------->GT1                                                            <------MYB46(1)      <---------ANAC46                                     --------->MYB59      <---------YAB1                                  --------->DAG2      <---------ANAC55(2)       <---------MYB46(3)   ---------->DOF2  --------->ARR11(3)            ----------->GT1   <------MYB83                                    <-- -------->ICU4                 --------->ALFIN1   ----------->GT1                                 <-- --->ANAC55(2)              <------ZmHOX2a(1)     <------MYB46(1)                                 <-- ----ANAC55(2)      <---------AHL20(2)           --------->MYB46(2)           --------------->AGL15 ---------YAB1     <---------AHL20(2)            --------->MYB59      <---------AHL20(2)         <--- --->ANAC46        --------->AHL20(2)         --------->ATHB12    <---------YAB1       <---------PCF5   tgaagattatgtataggggaattaaatgaaggagtggttattttcaaatgtttggtaaagtttggtttatatttgattttctatgtgagggaccattctt  15334200                                                                                                  ---                                                                                                  === -------ANAC58                                         <---------WOX13(1)                         --- -----GAMYB               --------->MYB52(1)         --------->ATHB12                             <-- -------ANAC58           ----------->HVH21<---------TOE2(3)                                       <-- ------MYB46(3)         <---------MYB59   <---------TOE1(3)                                       ---   ggttgtgttctgtcttcgcaaatgggcctaacgtctcttgggttaatgttttagttgattgagtttggccatcttctctgtttctgatgtcttcttgctc  15334300    <----------DOF2 ------>ANAC55(2)                                                     <----------DOF2 ==============bZIP_DOF                            <----------DOF2 <-----------GT1                 <- ------>O2                                   --------->ARR14(2)<---------AHL20(2)                 <-- -------O2<---------GLK1(1)            --------->YAB1      --------->YAB1                        <--- -------TGA1a           --------->WOX13(1)   <---------ARR14(2)<------------------------ANAC81   <--- ------>TGA1a        <-----------HVH21<---------ATHB12    <---------YAB1         <----------DOF2-----   acatgacttttgaaatctcttcatgtcaatccatttgccaataatccaatctgctttgttatcattttttttctttgtttcaactttcaatgctaagttg  15334400                                                                   ------->GAMYB                                                                  <---------MYB111(2)                                                        --------->AHL20(2)                                                   --------->AHL20(2)                                                   <---------AHL20(1)              --------->ZAT18                                                   <---------ARR11(3)             --------->TCP16(2)                                                   --------->AHL20(1)            <---------PCF5 --------MYB46(3)                                  --------->ARR11(3)  <----------DOF2            --- -------WOX13(1)                                   <---------AHL20(2) --------->TOE2(3)      <------- ------ANAC58                               <----------DOF2       --------->MYB46(3)       <--------- ------ANAC58                            <-----------GT1<---------AHL20(2)       <---------TCP16(1) ---->ATHB12        <---------AHL20(2)<---------ICU4<---------AHL20(2)<---------DAG2    --------->GLK1(2)   attgttgtcatgtagtatgtttttaatagttgaaaactaattgttactttcaatatattttaatgtcaacaaccttttttttgggtccacaatcttttat  15334500                                                                     <---------CCA1(1)                                                             --------->WOX13(1)                                                     --------->ICU4  <---------RVE1(1)     <----------DOF2                                 <---------AHL20(1)    <---------DAG2                                   --------->AHL20(1) <-----------GT1                                     <---------ARR11(3) ------------>AtSPL8       <------ZmHOX2a(1)   <---------HSFB2a(2)  <---------ARR11(3) --AHL20(2) <---------ANAC58             <---------------AGL15    <---------TOE2(3) -DOF2      <---------ANAC58    <------ZmHOX2a(1)    --------->ARR11(3)  <---------AHL20(2) ---------   tttttaccttttttgcttaaatattaagaggaaaggatgtaaacccatactagaaaatattatctatcaaggtatttttttcttccgaattcaataagaa  15334600  Previous    Next  AGI:  At5g38320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67050.1); similar to At1g67050-like protein [Arabidopsis lyrata subsp. petraea] (GB:ABY59212.1); similar to At1g67050-like protein [Arabidopsis lyrata subsp. petraea] (GB:ABY59213.1) Range:  from: 15333245    to: 15334064    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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