Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------ANAC58                            <---------ANAC58                     --------->YAB1                 <---------AHL20(2)                --------->AHL20(1)                --------->AHL20(2)                <---------AHL20(2)               --------->YAB1            <---------AHL20(2)                           <---------TOE2(3)           --------->AHL20(2)                          <---------AHL20(2)             --------->AHL20(2) --------------->AtSPL8  <---------GLK1(1)            <---------AHL20(2)   <----------ID1 <---------------AtSPL8  --------->GLK1(1)       <----------DOF2        ---------->DOF2 -------AHL20(2)<---------AHL20(1)            --------->GLK1(2) ----------->GT1       <---------AHL20(2)   ttaatggtactcatttaatataatcagatttcttacttcaattttgaaattctttttttaatgtaaatgtgaaaaaaagaacaagaatataaatccatac  15330900                                                                      <---------ARR11(3)                                                           --------->AHL20(2)                                                      ----------->GT1 --------->ARR11(3)                                             --------->ANAC46   <---------ICU4               --------                                             --------->ANAC58  --------->ICU4     --------->ARR11(3)                                             --------->ANAC58--------->YAB1       <---------ARR11(3)                                 <---------ANAC46 --------->DAG2--------->YAB1    <-----------ARR10               <---------YAB1    ----------->GT1 ---------->DOF2-------->HAHB4 --------->AHL20(2)   ttgagtttcttctaaatatgtttagaggtattgttctgtataaatccaagaaaaagtggaaaataataatgaaatcttgcataaaatcttgcctaaaaaa  15331000                                                           <---------AHL20(1)                                                           --------->AHL20(2)                                                           <---------AHL20(2)                                                           --------->AHL20(1)                                                        --------->AHL20(1)                                                       <---------ICU4                                                       --------->ATHB51                                                       --------->AHL20(2)                                                       <---------AHL20(2)                                                      <---------YAB1                             >>>>>>>>>>GT-1           --------->ICU4                             --------->ARR11(3)  <---------TGA2(1)                          <---------WOX13(1)     <---------bZIP60(1)                  <---------AHL20(2)             ----------->GT1                     <----------DOF2                 <---------AHL20(2)              --------->bZIP60(1)    --------->GLK1(2)      ------                 --------->AHL20(2)         <---------ANAC46           <---------GLK1(2) --------->ANAC55(2)      <------------CBF <---------YAB1       <---------ANAC58 <------------CBF     <-----------GT1   < ->AHL20(2)  <---------YAB1 --------->YAB1  <---------ANAC58--------->ATHB12    <-----------GT1<-----   tagtatggaattgtttttattaattttgaatgatatagatttcatggagtgatgtaattattttattggtttagaatctaattttctctttacataacat  15331100                                                                 ------->TEIL                                                                 --------->ARR14(2)                                                                 <---------ARR11(3)                                                                 <---------ARR14(2)                                                                 <---------ARR11(1)                                                                 <-----------ARR10                                                                <---------CCA1(2)                                                                <---------ARR14(1)                               --------->YAB1                 <---------ANAC58                              <---------YAB1                  <---------ANAC55(2)                 <---------ARR14(2)                           <---------ANAC58  --------->AHL20(2)    <-----------GT1                       --------->ANAC55(2) --->ARR11(3)    <---------GLK1(2)                      ---------->DOF2<---------YAB1 ----------DOF2  --------->ARR11(3)--------->ANAC55(2) --------->AHL20(2)                <---------ANAC58 ----ARR11(3)  ----------->ARR10   <---------ANAC55(2) <---------AHL20(2)<------------CBF<---------ANAC58   ctcttttaatacaaactcagattttgtaacccatgataagtattcatggatgagaaattaaagtccgtatcttctaattgttttcttcttagcttgtttc  15331200                ------>MYB83                ------>MYB46(1)              <---------MYB59                                                      <---------AHL20(2)            -------->P  ------------>CBF                                         <-----------TBP           --------->MYB52(1)--------->YAB1                                ---------->DOF2         <---------MYB52(2) <<<<<<<<<ARR2                            ---------->DOF2          <------ZmHOX2a(1)  <-------TEIL--------->TOE2(3)<---------CCA1(2)    ------------------------>ANAC81--------->AHL20(2)   taaatacatgaactaacctaataacttacaatcaaatctcttacagagagacattaagaagaaaactaaaacaaagtgaaagtatttatatggagaggat  15331300                                <---------YAB1                               --------->AHL20(1)                               <---------AHL20(2)                               <---------AHL20(1)                              --------->AHL20(2)                   <----------DOF2                              --------->YAB1          <---------AHL20(2)       <---------YAB1                          ------>ZmHOX2a(1)          <---------AHL20(1)        <---------TOE1(3)                         --------->TOE2(3)           --------->AHL20(1)        <---------TOE2(3)                    --------->At4g35610            <---------AHL20(2)       <---------YAB1                    <---------At4g35610   <---------TOE1(2)     <---------ARR11(3)        <----------DOF2                 <---------ANAC58         <---------TOE2(2)     --------->ARR11(3)     <-----------GT1                 <---------ANAC58        <-----------RAV1(2)   <---------CCA1(2)     <----------DOF2             <----------DOF2 <---------YAB1       --------->AHL20(2)      --------->YAB1  <---------DAG2   aacttcacttgtattctttgctagcttccttattatatttgtctcaggtatattatatattttgtatatctttcaattgttatggttctttactttattc  15331400                                 --------->YAB1                                <---------YAB1                              --------->YAB1                             --------->AHL20(2)                             <---------AHL20(2)                             <---------YAB1                            <---------AHL20(1)                            --------->AHL20(1)                                                      -                            --------->AHL20(2)    --------->YAB1                                   <-                       --------->AHL20(2)      <---------ICU4                                     <--        <---------TOE2(3)  --------->YAB1      --------->YAB1                  <---------At4g35610<--       <-----------GT1 <---------AHL20(2)     --------->ICU4                   --------->At4g35610<--   <----------DOF2    <---------AHL20(2)<-------TEIL     <---------YAB1        <-------GAMYB    <----   gatttctttaaacgtttcaagtattttaaatataattatacgttcacaataatcaaattttgatattgccagtttatggacagttgacaaaaccacttct  15331500          <---------HSFB2a(2)          <---------------AtSPL8 ---------->HVH21 --------WOX13(1)                                                                              <----- -------ANAC58                       <-----------HVH21                                        <------ -------AtLEC2                  --------->YAB1                                             <---------YAB1 -------ANAC58                 <---------YAB1                                            ----------->GT1 -----YAB1--------->HSFB2a(2)--------->YAB1                                   <---------YAB1  -------   gcttgacattttctagtacaacgtagatgaattatcatatgtcccatggcaatggatgaacagaacataaacaaaatagtatgatatagtaatgtgatta  15331600                                --------->TOE2(3)                          -------->HAHB4                          <---------ICU4                          --------->YAB1                         --------->ICU4                         <---------YAB1      ---------->DOF2  --------->YAB1 ===================================MADS_MADS                                                     --- --------------->AGL15<---------YAB1                       <---------YAB1                        ---- ----ICU4           --------->YAB1                       --------->YAB1              ---------->DOF2 ---YAB1           <---------YAB1                       <---------ATHB12            --------->AHL20(2) -->ICU4          <-----------------AGL3                <---------YAB1              <---------AHL20(2)   tttcatataaaagtattggttcttataatgataacataaataagacttactatgtctaatcataaatgtacaaatgcaagaacaaattaaagtgaattag  15331700                                                                                        --------->LBD16                                                                                       <---------ANAC46                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC55(2)                                                                                       <---------LBD16                                                                                      <---------LBD16                                                                                     --------->MYB52(1)                                                                                  --------->ZAT6                                                                                  <---------------AGL15                                                                                 ----------------->AGL1                                                                                 <---------TOE2(3)                               <---------ANAC58                                 <-----------GT1                               --------->ANAC55(2)                            --------->AHL20(2)                               --------->bZIP60(1)                            <---------AHL20(2)                               <---------ANAC55(2)                         <--------ATHB1                               <---------bZIP60(1)                         <---------ICU4                               <---------ANAC58         <---------AHL20(1) --------->AHL20(2)             --------->AHL20(2)<---------ANAC46         <---------AHL20(2) <---------AHL20(2)      <-      ----------->RAV1(1)      <---------bZIP60(2)      --------->AHL20(2) --------->ATHB51       <-- ------>CCA1(2)   --------->AHL20(2)<---------ANAC46   --------->AHL20(2) <---------ATHB51      <---- ----->ARR11(3) <---------TOE2(3)----------->HVH21   --------->TOE2(3)    <---------ATHB12    -------   atatatgccaacaaatttaagaaaatagcaatggcgtgacttattttcatcaaaacattaaattttgacattgtcaataatttaacattacgggaaacat  15331800  Previous    Next  AGI:  At5g38317.1    Description:  LCR58 (Low-molecular-weight cysteine-rich 58). Identical to Putative low-molecular-weight cysteine-rich protein LCR58 precursor (LCR58) [Arabidopsis Thaliana] (GB:P82772); similar to LCR80 (Low-molecular-weight cysteine-rich 80) [Arabidopsis thaliana] (TAIR:AT5G38330.1); similar to hypothetical protein MtrDRAFT_AC157504g27v2 [Medicago truncatula] (GB:ABD33391.2) Range:  from: 15331290    to: 15332456    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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