Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <-----------                                                                             <-----------HVH21       --------->ARR14(2)                                                   <----------DOF2       <---------ARR14(2)                                                <---------ARR11(3)      <------ZmHOX2a(1)                   <---------------AGL15          --------->ARR11(3)    <---------TOE2(2)                     --------------->AGL15   <----------ID1        ----------->GT1    <---------TOE1(2)            ---------->DOF2             --------->YAB1 =========================   aactcgtaggaactggaacactgaaactcccatcacaaagtataccatatgtagagttttgaataatagagccaagacctttcactggacatgtgaaatt  15296100             ==========================================bZIP_DOF             --------->TGA1a             <---------O2             --------->O2             <---------TGA1a            <------NtERF2                                       --------->HSFB2a(2)           ------>NtERF2                                        <---------HSFC1(1)            <------ZmHOX2a(1)          <----------ID1                                        <---------HSFB2a(2)         <-------- --------->ANAC58                                              <---------LBD16           --------->ALFIN1 --------->ANAC58                                       --------->At5g28300            --------->ALFIN1 ----------WRI1   <-----------HVH21         <----------DOF2  --------->GLK1(2)     ---------->DOF2 ======================bZIP_DOF       --------->ALFIN1 ----------->GT1           --------->CCA1(2)   cccaaggaaatggcgacgagggtcacaagcgtagaacacagtgaggcttttgtaagatggtaaattctggaagagacctgaagataaaagtgtggaggag  15296200                                                                                                <----                          --------->ARR11(3)        --------->ANAC55(2)                         <----                   --------->TOE1(2)                <---------ANAC46                       <XXXXXXXXX                <------ZmHOX2a(1)                   <---------ANAC55(2)               <---------ZAT18            ---------->DOF2                         --------->ANAC58                  --------->ZAT14        --------->ZAT14   <---------ARR11(3)      --------->MYB52(1)                  <---------ZAT14        --------->At4g35610          ---------->DOF2--------->ANAC58            <------ZmHOX2a(1)   <---------At4g35610   --------->GLK1(1)       ----------->TGA1      --------------->AGL15    <---- -ANAC46<---------ZAT14  <---------GLK1(1)       ----------->HVH21     <---------------AGL15 <-------   aatgaagcagagcagaaaggacctgagaaatcttgtcttgaaagtccaagagtgacggaattgttgttgttgtctatatagaggacagtgtagttgtggc  15296300                                                                                       --------->ANAC58                                                                                       --------->ANAC58                               <-------GAMYB                                         <---------------AGL15                              <-----------RAV1(1)                                    --------------->AGL15                              <---------MYB46(3)                             <---------ARR14(2)      --------->CCA1(2)       --------->MYB52(2)                        --------->DEAR3(1) -----ANAC58            <---------ANAC58                              <---------At5g28300 -----ANAC58            <---------ANAC58                    --------->RAP2.6(2)     <---------------- XXXXXXXXXXXMIR398B/C   <---------ANAC46                    --------->ANAC58 --------->ARR14(2) -----ANAC46      <---------YAB1                            --------->ANAC58 --------->GLK1(2) --RAP2.6(2)      <---------ANAC46     --------->ZAT14  ----------->HVH21--------->LBD16 ---------->DOF2   ctgagaagataagagaggttgtgtttgagtgtttgttgcagtttagtttcagagaatggtgaccgcaaacttcaccgcgaatccctcccaagaaaggaaa  15296400                                                                      ----------->GT1                                                                  --------->ANAC58                                                                  --------->ANAC58                                                       <---------ANAC58 --------->ZAT2 --------->ANAC46                       <---------ANAC58 <---------ARR11(3)    ------- <---------ZAT2 <---------ALFIN1      ----------->RAV1(1)    --------->ZAT18 --------->AHL20(2) <---------At4g35610               --------->DEAR3(1)  <---------ANAC46 --------->ARR11(3)    <------ --------->At4g35610  --------->MYB52(1)       --------->YAB1<---------ZAT18 <---------AHL20(2)<----- -AGL1     <-----------GT1      <---------ALFIN1  <---------ICU4  --------->ANAC46   --------->YAB1   accagctgtgatgtttccacaccgaaacggagtaccacagccccataaatcatcttggcttagagcacaaggaagataataaaacaagaataacaagatc  15296500                                              <---------ANAC46                                              <---------ANAC58                                              <---------ANAC58                                              <---------ANAC55(1)                                              <---------ANAC55(2)                                              --------->ANAC55(2)                                              <---------TGA1a                                              --------->O2                     ================HOX2a_HOX2a                     ------>ZmHOX2a(2)        <---------bZIP60(2)                    <------ZmHOX2a(2)         <---------O2         <---------ZAT2       <------ZmHOX2a(1)        ------>MYB83=================HOX2a_HOX2a--------->ALFIN1        ------>MYB46(1)      <----------ID1   --------->TGA1a -->ARR11(3)       --------->ARR11(3)       <---------TGA2(2)                                    <--- ---ARR11(3)       <---------ARR11(3)      ----------->TGA1                        <---------ZAT18 -ZmHOX2a(2)      <---------GLK1(1)        ----------->HVH21               --------->AHL20(2)    ----   agacagaacctagctgtttgagatcccatggaggacaaataatccatgacgtgtgagaataagttttctgtgaacaaatatttagaacacttgtttgata  15296600                                                                      <-----------ARR10                                                                      <---------ARR14(2)                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                      <---------ARR11(1)                                                                      --------->ARR14(2)                                                                <---------WRKY18(1)                                                             ------>ZmHOX2a(2)                                                           --------->ARR11(3)                                                           <---------ARR14(2)                                                           <---------ARR11(3)                                                           <---------AGP1         --------->CCA1(2)                                 ------->TEIL  <----------DOF2         ----  <---------ZAT14                                          --------->ARR14(2)                <------- ------TOE2(3)           --------->DAG2         <-----------RAV1(2)  <---------ARR14(1)<---------ZAT18 ----->DAG2        <----------DOF2   <----------DOF2--------->ALFIN1 <---------CCA1(2) --------->ZAT14   aggctacagagaaatgggagactttataagggggagagacttttcttacaacaggtgtatggatcttgaccatatctttgtttcttctgttcacactttg  15296700              <---------YAB1             <---------ARR11(3)             --------->ARR11(3)            --------->YAB1         <---------ICU4         --------->YAB1        --------->ICU4                                                       <---------AHL20(2)      -------->ATHB1                                                         <---------YAB1      <--------HAHB4                                                   --------->ICU4      <---------ICU4                                                 --------->YAB1      --------->YAB1                                         <---------AHL20(2)     <---------ATHB12              <-----------GT1           --------->AHL20(2)     --------->ICU4              <----------DOF2           --------->TOE2(3)<---------AHL20(2)   --------->WOX13(1)      ------>ZmHOX2a(1)        <-----------GT1  <---------ICU4 ------------>CBF     --------->GLK1(1)       <---------ANAC58   <---------AHL20(2) ------>ID1<---------YAB1----------->RAV1(2)  <---------ANAC58   --------->AHL20(2)          <-------TEIL ---DOF2<---------YAB1<---------GLK1(1)      ---------->ID1<----------DOF2  --------->AHL20(2)   tctctcaatcattatgatatttggaactcctgtttctttaccttcttgtcgtttctaccatctttaattaaaaatgattttaattcatccaagagtacat  15296800                                                                 <---------ICU4                                                                ==============================HOX2a_HOX2a                                                                <---------YAB1                                                                ------>ZmHOX2a(1)                                                               <---------MYB59                                                              ------>ZmHOX2a(2)                                                              ==========================HOX2a_HOX2a                                                             ===========================HOX2a_HOX2a                                                             <------ZmHOX2a(2)                                                            --------->ARR11(3)                                                            <---------ARR11(3)                                                            <---------ARR14(2)                                                            --------->ARR14(2)                                                          ----------->ARR10                 <------MYB46(1)                        ---------->DOF2                        ------                 <------MYB83                      <---------ANAC58                        <---------GLK1(1)                --------->MYB59              ------->MYC3 --------->HSFB2a(1)              --------->GLK1(1)         ----------->GT1                     <-------MYC3 <---------HSFB2a(1)          ------>ZmHOX2a(2)        --------->DAG2             ----------->GT1 <---------ANAC46                   <---------At4g35610       ---------->DOF2            --------->DAG2   <---------ANAC58              =============HOX2a_HOX2a    --------->YAB1              ---------->DOF2   <---------MYB46(3)             ------>ZmHOX2a(1)   ccctattcataaagtaatttggtaatccacaaacaaaaggttatacacatggtgcttggaaagatcctaattgcataaacatcctctgatctgatttctc  15296900                                                                    <---------ARR11(3)                                                                    --------->ARR11(3)                                                              --------->ANAC46                                                              --------->ANAC58                                                              --------->ANAC58                                                            <---------ALFIN1                                                          ----------->RAV1(1)                                                         --------->DREB2C(2)                                                         --------->At1g77200                                                         --------->DEAR4(1)                                                         ----------->HVH21       --------->ARR11(3)                                                         ------->GAMYB           <---------ARR11(3)                            --------->ARR14(2)          --------->DEAR3(2) --------->YAB1    -------- --------->AGL15            <---------ARR14(2)       --------->MYB46(3)   <---------YAB1     --------   tataggttagaaatggaacacatataccaaaatccacaagtctcttgaagtcaaaacgaccgacacacaatatctcattataagttcttaagagcaagta  15297000  Previous    Next  AGI:  At5g38240.1    Description:  serine/threonine protein kinase, putative. similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G38250.1); similar to Ser/Thr protein kinase [Lotus japonicus] (GB:BAD95895.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 15294469    to: 15296547    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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