Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---   <----------DOF2                                                                              <---- ---------AHL20(2)                                                  <---------ANAC46            ----- -----------GT1                                                     <---------ANAC58        --------- -----AHL20(2)                                                      <---------ANAC58      <----------DOF2 ----ARR11(3)                                              <---------AHL20(2)             --------->TOE2(3) ----AHL20(2)                                             <---------AHL20(1)        <---------AHL20(2) ----AHL20(1)                                             --------->AHL20(1)       <---------AHL20(2) --->AHL20(2)                <---------YAB1              <---------CCA1(2)--------->STY1(2) <-------- --->ARR11(3)             <---------YAB1        <-------TEIL   <---------AHL20(2)  --------->AHL20(2) --->AHL20(1)            --------->AHL20(2)    --------->AtLEC2--------->AHL20(2)  <---------AHL20(1)   atttactttgtgtagttgaaaacacaatattatacttatatgtgtgaacatgcattcttatatatttatttcgtctagctatcaatttttttctttaatt  15277800                                                             <---------AHL20(2)                                                          --------->AHL20(2)                                                          <---------AHL20(2)                                                          --------->AHL20(1)                                                          <---------AHL20(1)                                                        <---------AHL20(2)                                                  ----------->GT1                           ------>MYB46(1)                                                  <---------ANAC58                          ---------        --------->At4g35610                       <---------ANAC55(1)                       ------>MYB83        <---------At4g35610                       <---------ANAC58                         --------->MYB55(1)  <---------AHL20(2)                              <---------ANAC46                        <---------MYB46(2)  --------->AHL20(2)                              <---------ANAC55(2)            <xxxxxxxxxxxxxxxxxxx  <---------YAB1                                <---------TGA2(2)            --------->ARR14(2) ------AHL20(2)           <-----------GT1      ----------->HVH21    <-----------RAV1(1)   <---------MYB59 -----AHL20(2)   <---------AHL20(2)            <---------ATHB12     <---------MYB46(3) <-----------GT1 ---->AHL20(2)  --------->AHL20(2)             ----------->TGA1 <---------YAB1  <----------DOF2 >AHL20(2)      <---------AHL20(1)  <---------AHL20(2)  <---------AHL20(1)   <---------ARR14(2)------ -AHL20(2)      <---------AHL20(2) --------->AHL20(2)  --------->YAB1       <---------CCA1(2) -------   ttatataattagctgcaatttttttttttaactccaattttatacttcaatgacgtataatattttatagttgttggcctatctttgtataacctaacgt  15277900                                                         <---------DAG2                      --------->TOE1(3)                  <----------DOF2          --------->ZAT14                      --------->TOE2(3)             <-----------GT1           <-----------GT1 >MYB52(1)       <---------MYB52(2)       ------->TEIL<-----------GT1     <---------GLK1(2) xxxxsmallRNA(i2)--------->MYB46(3)   --------------->AtSPL8              --------->ARR11(3) --->TOE2(3)   <-----------GT1   <---------YAB1    <-----------GT1------>ZmHOX2a(1) ---->GT1    --------->AHL20(2)<-----------GT1    <---------AHL20(2)      <---------ARR11(3)   aaaatgctatttcaatataacaaaccttacaaattacaattacgaaccctattttatcacttttcttcctaagaaagatttttctgaactctgaaatagt  15278000                                                                                  <---------ANAC55(2)                                                                                  --------->ANAC55(2)                                                                                  --------->O2                                                                                  <---------ANAC58                                                                                  <---------bZIP60(2)                                                                                  <---------TGA1a                                                                                  <---------ANAC55(1)                                                                                  <---------O2                                                                                  --------->TGA1a                                                                             ---------->DOF2                                                                             ===============bZIP_DOF                                                                           --------->MYB46(3)                                                                          ==================MYC_MYB                                                                          -------->P                                                                         --------->MYB52(1)                    <-----------GT1                                     ------->GAMYB                 <---------GLK1(2)                                      ====================MYC_MYB                 --------->ARR11(3)                                    --------->MYB46(3)                 <---------ARR11(3)                                    <---------MYB46(2)                 <---------ARR14(3)                                    <---------MYB52(2)                 --------->ARR14(2)                                   --------->At4g35610                 --------->ARR14(3)                                   <---------At4g35610        <---         --------->DOF5.7(2)                                   =============================bZIP_DOF        --------->TOE1(3)                            ---------->DOF2<---------WRKY12 <-----------HVH21        --------->TOE2(3)      <---------WOX13(1)    =======================================bZIP_DOF       --------->ANAC46    --------->At5g28300  <----------ID1 ---------->DOF2    <---------ANAC58   ttttcttatacgttaacaagattttccacagtgaatgacttacaaataaaacgagaaaagtcttccaaagtcaactaaccaaagacgtgtcatttagttc  15278100                            --------->YAB1                            <---------ICU4            <-----------ARR10                                                                     <--            <---------ARR14(2)                                  <----------DOF2                   ---            --------->ARR14(2)                    --------->AtMYB61                               <--            --------->GLK1(2)                     --------->HSFB2a(1)      <---------ALFIN1      <--- ------HSFB2a(2)    ------>ZmHOX2a(1)     <---------MYB46(3) <---------ARR11(3)               <------   tccaagtctatgagtatctgtccttctcaatattgacttagtcgtggttcgaccattccactagctcttttctgtctccacttggtttttttttgtttaa  15278200                                                            <---------ICU4                                                           <---------ATHB12                                                         --------->WOX13(1)                      ----           --------->ANAC46                          --------->GLK1(1)                           ----  --------->YAB1                                    --------->ARR14(2)               --------->GLK1(2) -------ICU4                                        <---------ARR11(3)              --------->ARR14(2) ------>ATHB12                                    --------->LBD16                   <---------ARR14(2) ------HAHB4                                     <---------HSFB2a(2)                <---------GLK1(2) ------ATHB12    --------->TOE2(3) *TSS      <----------DOF2--------->YAB1 --------->ZAT14     ------ ---AHL20(2)     <----------DOF2  ---------->DOF2--------->HSFB2a(2)       <---------ZAT14     <-----   tcatttatcatctactctactttaaacacaaaccaaaaaagaaactactttccagatatcaatcatgttctctccagtactcttcagattctcaaaacct  15278300                                                                                                    -                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                            <---------WRKY45                     <---                                              --------------------->WRI1                    <--------                                              <---------ANAC46                          <-------GAMYB  <----------DOF2                             <---------ANAC58                         <---------ANAC58 -->MYB46(1)                                  <---------ANAC58            ----------->HVH21 --------- -->MYB83                              <----------DOF2      <---------WRKY12           <---------ANAC58 --->TOE2(3)                        <-----------GT1         <---------WRKY38(1)        <---------ANAC46 ----MYB59   ------>ZmHOX2a(1)------>ZmHOX2a(1)        ---------->DOF2  --------->O2<---------MYB52(1)   aattcttttctggtccttctcttcttcttatcctatattcactttcttccttgtgctcaaagtcaacgagaaccatgtgacactctgtttcgttgtgggg  15278400              ----------------->AGL1              <---------------AGL15              --------------->AGL15             ----------------->AGL1             <-----------------AGL1             <-----------------AGL2             <-----------------AGL3     <---------ZAT2    --------->DEAR3(1)                  -------->P   --------->MYB46(3)                   ------>MYB46(1) ---------->HVH21                       ------>MYB83 ---->ZmHOX2a(2)                       <---------ALFIN1 -------At4g35610                     <---------ALFIN1 ------>GLK1(1)                      <------NtERF2 -------GLK1(1)                    --------->PCF2 ------>At4g35610                <---------ATERF1(1) ----ZmHOX2a(2)            --------->ALFIN1 ----->ARR11(3)          --------->ALFIN1 ------ARR11(3)      <---------LBD16------>NtERF2                  <---------ZAT14 ----->ARR14(2)    <---------LBD16------>NtERF2                    --------->ZAT18 ------ARR14(2) <----------DOF2 --------->ATERF1(1)                --------->ZAT14 -ANAC46  <---------ARR14(2)  <---------ANAC58                 <------ZmHOX2a(1) >ALFIN1  --------->ARR14(2)  <---------ANAC58            <----------DOF2                           -   atctcacagccggtttccctttctggggagtggctcggccccaaccttgtggtcatccatctttaggacttcactgccaaaaacaaacaaattcgacttc  15278500                             <---------HSFB2a(2)                             --------->HSFC1(1)                             <---------HSFC1(1)                             --------->HSFB2a(2)                      <---------ANAC58                    <---------AHL20(2)                      <---------ANAC46                    --------->AHL20(2)                      <---------ANAC58                  <---------------AGL15                      <---------ANAC55(1) ==============================MADS_MADS     --------->At4g35610 --------->ZAT14  <---------------AGL15   --------->YAB1   ------->TEIL          --------------->AGL15             <----------DOF2 <--------   <---------ICU4   <---------At5g28300   --------->ZAT6--------------->AGL15        <-------TEIL  <---------ATHB12<---------SPL7 ----------->GT1    <---------ZAT18     --------->ANAC58    <-------- -------->YAB1   <---------REM1(1) --------->AHL20(2) <---------ZAT6    --------->ANAC58    ---------   tctaatcatctcaagtctgatgtaccgtgttctcgaagtaaataccactactagtactcttaaattagtaaggcaagacttttcaggtccattctgctcg  15278600                               <---------DAG2                               <----------DOF2                   --------->WRKY12                   --------->WRKY38(1)                                                              -                   --------->WRKY45                                                                 -                  --------->DOF5.7(2)                                                            <---       <---------LBD16  ----------->RAV1(2)                       <---------At4g35610       <-------- -At4g35610      --------->TOE2(3)      <----------DOF2           --------->At4g35610    <---------ZAT6 -ZAT2 --------->At4g35610--------->LBD16                <---------ARR11(3)         ------->GAMYB---- >ZAT2 <---------At4g35610------>ZmHOX2a(1)            --------->ANAC46             --------->TOE2(3)   gcttcattcagcggagcaacgttgactcctgaactttttgagcttttgccagactacaagaccctctccgcttactacctctgcaaccctagtcttcact  15278700  Previous    Next  AGI:  At5g38210.1    Description:  serine/threonine protein kinase family protein. similar to serine/threonine protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G66880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68095.1); similar to hypothetical protein OsJ_002978 [Oryza sativa (japonica cultivar-group)] (GB:EAZ13153.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 15278235    to: 15282860    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version