Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                           <---------YAB1                                                                                           --------->ICU4    ----------->GT1                      <---------TOE2(3)                               <---------ICU4  --------->ALFIN1                    <---------AHL20(2)                                 --------->YAB1  <---------ANAC46           --------->bZIP60(1)                      ----------->HVH21 <---------ATHB12 ------->ALFIN1         --------->At4g35610 >>>>>>>>>>GT-3b  ---------->DOF2            <---------ATHB51 --GT1      <----------DOF2  <---------bZIP60(1)         >>>>>>>>>>MYB80                --------->ICU4   tgagggggggaaaactttagataatgagatgaggtcatattttaagaaaaatatagtcaaaccaaaagacaaatgacatttgaaaaaacaataatgaata  15263700               <-----------ARR10               --------->GLK1(2)               <---------ZAT6                        --------->TOE2(3)               --------->ARR14(2)              ----------->GT1                      <---------ICU4               --------->ARR11(3)      --------->TOE2(3)                  <-----------ARR10               <---------ARR11(3)     ----------->GT1                     <---------ARR11(3)               <---------ARR14(2) <---------YAB1                          --------->ARR11(3)              <---------GLK1(2)   --------->AHL20(2)                   --------->AHL20(2)      ======    ---------->DOF2   <-----------GT1<---------TOE2(3)                 <---------AHL20(2)<---------YAB1 ----->DOF2   <---------ARR14(1)  <---------AHL20(2)      <---------MYB52(1)     --------->YAB1<-----   aaggagaaaaggaagagaatctttttatctcacaatataaatgttaatagagataatttcggtagtttacaaataaaatcttatcaacattattttggtt  15263800                                                                        <-----------GT1                                                                    --------->AHL20(1)                                                                    <---------ARR11(3)                                                                    --------->ARR11(3)                                                                  <---------ARR14(2)              ---             <---------------AGL15                           --------->MYB52(1)                   <--             <----------DOF2                                 <---------DOF5.7(2)            ---------             --------------->AGL15                         --------->DOF5.7(2)              ---------    <--------P                                            <----------DOF2                   --------- ============================MADS_MADS          <-----------GT1   --------->ARR14(2)        --------- ----------AGL15  <---------YAB1        ----------->GT1   --------->TOE2(3)               --------->ANAC46   tatatggtagtttttcttttatgagtcacaatggttttcatatagaaaattatctatatactttaacggatatattactatgcaacttatacactcgaca  15263900       --------->ZAT6 ---->MYC3 -----MYC3                              <---------DAG2                                   ------->MYC2 -->HVH21                         --------->TOE2(3)                                      <-------MYC3 >ANAC46            ---------->TaMYB80  <----------DOF2                <---------GLK1(2) <-------MYC2 >ANAC58      <---------ANAC46    --------->TOE1(3)                  --------->AHL20(2)  ------->MYC3 >ANAC58     <---------AtMYB61 <-----------GT1 <-----------GT1<----------ID1          <---------ALFIN1   catgtttgaacacttgtggtggaatatgagttataaccttcactttattttacatatggccaaatggacaaaaaattctcacaactcaacacatgcttaa  15264000                                               <------------CBF                                              --------->ATHB12                                             <---------YAB1                                           <---------AtLEC2                --------->TOE2(3)          <---------ANAC58                                  <-------              ------->TEIL                 <---------ANAC58                         ------------>CBF<              <-------TEIL        <---------DAG2<---------WOX13(1)                  <------ZmHOX2a(2)    <---------HSFB2a(2)           <----------DOF2                     <---------------AGL15  <-------    --------->HSFB2a(2)        <-----------GT1<---------ICU4         --------->TOE2(3)--------->WOX13(1)   gcacttgtggaacatgtacattagtcatggttttcactttattttgcatgattgccaaatggatgagtttttcttaacaaggatagatcaatctgacttg  15264100        <---------AHL20(2)        --------->AHL20(2)        <-----------TBP                               --------->ARR11(3)                           <-      <-----------TBP                                 <---------ARR11(3)                           --    <---------YAB1                             --------->ANAC46--------->AHL20(2)           --------- <---------MYB52(1)                         ------>MYB46(1)    <---------AHL20(2)      --------->ANAC58 --ANAC58                                 --------->TOE1(2)   --------->AHL20(2)       --------->ANAC58 -------GAMYB                           *TSS------>MYB83--------->TOE2(3)             XXXXXXXXXXXXXXX --ANAC58                 --------->YAB1------->TEIL <---------GLK1(2)               ---------->DOF2-   tctgttatatttatatagagttttgccatcgtaagaactaagaacctacaaaccaaaatctcaaatttataagttttaaaaacaattgaaagcaaaaaga  15264200                                                                         ------>ZmHOX2a(1)                                                                    --------->At4g35610             --------->ANAC46                                   <-----------HVH21    ---------->DOF2                                            <---------bZIP60(1)  <---------YAB1                                               --------->bZIP60(1) --------ATHB12                                            <-----------HVH21 ------->ICU4--------->ANAC58                              <---------RAP2.6(3)                      < ->DOF2      --------->ANAC58     --------->MYB52(1)       <-----------TGA1   <---------YAB1        < XXXXX>MIR863-3P              ------->TEIL        ----------------------->TaNAC69(2)          <------ -------->YAB1          <-------TEIL --------->YAB1<---------YAB1   <---------At4g35610--------->YAB1   aatcatcaaagtttcaagacatgaagttcatgaaactaatggtcatcacagttgtgatagtcgtcatgtcatctcctattttgatcaaatcagaagtgtc  15264300                                    --------->ANAC46                                    --------->LBD16             ---------->DOF2                                   --------->ATERF1(2)        <---------MYB52(2)                                   <---------ATERF1(2)       ------>MYB46(1)                                  <---------LBD16            ------>MYB83                                  --------->RAP2.6(3)      ------->GAMYB                                 -------->P               <---------MYB52(2)                              <---------ANAC58            <---------MYB55(2)               ------->GAMYB  <---------ANAC58            --------->MYB46(3)        --------->ATHB12    --------->ANAC55(2)     --------->ICU4        <------ZmHOX2a(1)             --------->MYB52(1)    <---------ANAC55(2)     --------->AtLEC2   <-----------RAV1(2)  <---------GLK1(2) <---------WOX13(1) -----------TGA1       --------->ANAC58   --------->YAB1 --------->ANAC58  <----------ID1 -----------HVH21      --------->ANAC58  <---------ATHB12--------->ANAC58  <---------ETT(1)         - -----HVH21 ----------->RAV1(1)  --------->MYB52(1)  <------ZmHOX2a(1)<---------MYB46(3)     --------   atcgtcatgtattccaacagaactcatgccatgcttaccggcaatgaccacaggaggacaaccaactaaagattgttgcgacaaactgattgagcaaaag  15264400                                              --------->At4g35610                                              <---------At4g35610     <---------HSFB2a(2)                          <---------------AGL15                       --------->HSFB2a(2)          <-                          --------------->AGL15             --------->ANAC58                <--------                    --------->MYB46(3)     <---------MYB52(1)  ---------->DOF2           ------>ZmHOX2a(1)                  <-----------GT1        --------->MYB52(2) --------->ANAC58            <---------ANAC58                  --------->YAB1         <---------MYB46(3) --------->ANAC46            --------->TOE2(3)          <-------GAMYB  ----------------->AGL2           <---------ANAC58              <---------ANAC58         ----------->GT1 ----------------->AGL3           <---------ANAC58         <---------KAN4(1) -------->ICU4 --------->TOE2(3)       <---------MYB52(1) <---------ANAC46         --------->KAN4(1) -->DOF2 <---------MYB46(3)     <---------------AtSPL3<---------At4g35610     ----------->GT1  ------   gaatgtttatgtggttacattaacaatcccttatacagtacgtttgttagctctccagttgctcgcaaagttttagaagtttgtaatattccttatccta  15264500                                                                                     <-------GAMYB                                                                                    --------->MYB111(1)                                                                                    <---------MYB46(3)                                                                                    --------->MYB55(2)                                                                                    --------->MYB111(2)                                      --------->YAB1                             <---------MYB46(3)                                     <---------YAB1                             <---------YAB1                            --------->ATHB12                                 <---------YAB1                           <---------YAB1<---------ICU4                      --------->ICU4                          --------->TOE2(3)                                --------->YAB1             --------->YAB1--------->ICU4<---------AHL20(2)               --------->ICU4   ---------->DOF2----------->GT1  --------->YAB1                  --------->ZAT14 <--------P --------MYB46(3) <---------ANAC55(2)--------->ICU4       <-----------GT1 <---------YAB1 -YAB1      <---------ATHB12<---------ICU4         --------->TOE2(3)    --------->YAB1 >ZmHOX2a(1)--------->AHL20(2)<---------YAB1   ------>ZmHOX2a(1)   <---------ZAT14<-------GAMYB   gttgttaaagctcaataaatatgtaaaacattattagtaataataaatcctaatcttatataacaacagttcagtgatgatgatggttgttgggagtttt  15264600  Previous    Next  AGI:  At5g38195.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G38180.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G38197.1); similar to seed specific protein Bn15D80B [Brassica napus] (GB:AAP37973.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrop Range:  from: 15264140    to: 15264559    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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