Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                               <-----                                                                <------MYB83            --------->LBD16                                                                <------MYB46(1)        --------->ANAC58                                                               --------->MYB59         --------->ANAC46  <----------DOF2                                         ------->MYC3                 --------->ANAC58 -------MYB52(1)                    --------->YAB1        ------->MYC2                <---------LBD16 ---------->AtSPL8                 <---------ATHB12       <-------MYC3              <---------ARR14(2) ---------->AtSPL3      <-----------GT1         ----------->RAV1(1)                 --------->GLK1(2) -----GT1            <---------GLK1(1)   <----------DOF2  <-------MYC2              --------->ARR14(2)   ggtactttcttccaagcgtttggatttcactgtatcaatgatactttgagcaacatggaacgtgttcggtccaatagaacatccaaaatccgcaattcta  15218000          --------->YAB1    <---------MYB59    --------------->AGL15    <---------------AGL15   ----------------->AGL2                                                                       -----   ----------------->AGL3        <----------DOF2                                                -----   ----------------->AGL1  --------->ALFIN1   ------->TEIL                                  --------- ------>DOF2               <---------------------WRI1  ---------->ID1              <----------DOF2 ----HSFB2a(2)          <---------AtMYB61   <-------TEIL <----------DOF2      <---------At4g35610  --   aaagtaccaaaatcagaacttagttggaggtcgagcttttcaaagatgcatcgtcttgtcttttctacagcgctacttatagctgctttctgtatcatac  15218100  <---------AHL20(1)  <---------ICU4  --------->AHL20(2)  <--------ATHB1  <---------AHL20(2)  --------->YAB1 <---------YAB1                                                                           <---------HSFC1(1) --------->ICU4                                                                           --------->HSFB2a(2) ---->YAB1                        <-------TEIL                   --------->AHL20(2)       <---------HSFB2a(2) ---->ANAC55(2)                 <---------ARR14(2)        --------->YAB1                  --------->HSFC1(1) >YAB1      ----------->GT1     --------->ARR14(2)    <---------YAB1                   --------->GLK1(2) ------->YAB1      <---------AHL20(1)               <-----------GT1             ----------->GT1     -   ataataattttagctagttaatatatgtattgcatatacatgttttggctcaaattacaattacaaaaaaaatcgcataacatggtgaaattctagaaaa  15218200                                                             --------->YAB1                                                      --------->YAB1                                                     <---------YAB1                                                 <---------ZAT14                                                 <---------ZAT2             <---------AHL20(1)                                                 --------->At4g35610        <---------ARR11(3)                                                 <---------At4g35610        --------->AHL20(1)                                               <---------DEAR3(1)           --------->ARR11(3)                   <---------ANAC46           --------->ATERF1(1)     --------->YAB1            --------->YAB1                    --------->At4g35610  --------->YAB1            <---------ICU4                    <---------At4g35610  <---------ICU4         --------->YAB1                      <---------ATERF1(1)  --------->ICU4        <---------AHL20(2)                  <---------DEAR3(1)  --------->YAB1              --------- --------->DOF2 --------->ALFIN1           --------->RAP2.6(3) <---------YAB1           --------->ANAC46   aaaaaagcatataatcatgtggagtttgtcaaaatggactaatcagacggctgctctgataaatgataatcatcaaaatatatcaaatatacagaattca  15218300                <---------ANAC58                                 ---------->CDC5      --------->YAB1                    ------->TEIL          <---------At4g35610     <---------YAB1                     <-----------GT1       --------->At4g35610                   <  --------->AHL20(1)                ------->TEIL           <---------At4g35610                   <---  <---------AHL20(1)             <---------TOE2(3)         --------->At4g35610                   <---  <---------ARR11(3)          --------->ICU4          ----------->HVH21              <---------ARR11(3) >GLK1(1)       <---------ANAC58 <---------YAB1     ------>ZmHOX2a(2)    <-------TEIL--------->ARR11(3)   acaatatatcataacattacttggtatgaagaattatggatgtaactgtgttgatcgtgaccgctgctcatcgggtacatgtgagaagatgttgacattg  15218400                                                     <---------------AGL15           <---------ANAC58                          --------------->AGL15           <---------ANAC58                          <-----------TBP           <---------ANAC46                        --------->AHL20(2)                            <---      <---------ICU4                               <-----------TBP                               <---     --------->ICU4                      --------->MYB52(2)   ---------->DOF2               <-------- ---------ANAC46                       <---------MYB52(1) ---------->DOF2                   <-------- ------ANAC58   <---------ZAT18       --------->TOE1(3)  <---------AHL20(2)               ---------->DOF2 ------ANAC58  *TSS    ----------->TBP--------->TOE2(3)----------->TBP        <------------CBF <-----   cttcgtatttatgacttgtgaacttataaatctcttacaacgttagtttctgtttatatataaagaaagagttgaaaacaaattgcattttttaaaggtt  15218500                                                                     <---------YAB1                                                               <---------YAB1                                                               <---------AHL20(2)        --------->ANAC58                                      --------->AHL20(2)    <---------At4g35610                                  --------->AHL20(1)    --------->At4g35610                                  <---------AHL20(1)    --------->ZAT2                                       --------->AHL20(2)    <---------ZAT2                       --------->At4g35610  <---------AHL20(2) ---MYB46(1)                         <---------ARR14(2)  <---------AHL20(2) ---MYB83                            --------->ARR14(2) --------->AHL20(2) -TOE2(3)                       <---------ANAC46        <---------AHL20(2) -TOE1(3)                 <---------AHL20(2)        --------->AHL20(2)                 --------->AHL20(2) ---P   --------->ANAC58  --------->AHL20(2)        <---------AHL20(2)   <---------LBD16   ggacacagctaagcattcagtaagacaattaatagtgtgtatttgctgaagaatttaaataaattttaattgttatcgggagttttaaaaaatataactg  15218600                           ----------->GT1                        ---------->DOF2                   ------>MYB46(1)                   ------>MYB83                 --------->AtMYB61                                                           <-------                 <---------MYB59                                                             --------              >>>>>>>>>>WRKY11                                                         --------->AHL20(1)              >>>>>>>>>>WRKY26                                                        --------->ATHB51              >>>>>>>>>>WRKY43                                   --------->O2         <---------ICU4              >>>>>>>>>>WRKY38                                   <---------TGA1a      --------->AHL20(2)              <---------WRKY18(1)             <------ZmHOX2a(1)  <---------O2         <---------AHL20(2)              >>>>>>>>>>WRKY6            <---------REM1(1)       --------->TGA1a  --------->AHL20(2)             --------->WRKY38(1)   --------->AHL20(2)   <---------ICU4            <---------AHL20(2)             --------->WRKY45     --------->AHL20(2)    --------->ATHB12  --------->ICU4<---------YAB1             --------->WRKY12 --------->AHL20(2) --------->ATERF1(1) ----------->GT1 --------->ICU4   atagtaacacagaagttgaccaaaccaaaagataaaataaaaaatgtaggagcatccctcattgctcacatgggtaacaattgtttaattattttagctc  15218700                                                                               <------ZmHOX2a(2)                                                                              --------->ARR14(2)                                                                              --------->ARR11(3)                                                                              <---------ARR14(2)                                                                      ===============================                  --------->ARR11(3)                                  --------->O2              -----                  <---------ARR11(3)                                  --------->TGA1a          ------         <---------MYB46(3)                                           <---------O2        --------->LBD16        <---------TOE1(2)                                         <-----------HVH21      <----------ID1       <---------MYB52(1)    --------->YAB1                      <----------DOF2------>ZmHOX2a(2)     <---------ANAC58        --------->AHL20(2)                  ===============bZIP_DOF <---------ANAC46     <---------ANAC58      --------->AHL20(2)                  --------->HSFC1(2)        <---------RAP2.6(2)     <---------ANAC46 ----------->GT1                          <---------HSFC1(2)       --------->RAP2.6(3) --At4g35610     --------->YAB1                          ----------------------->TaNAC69(2)<------NtERF2 ->At4g35610    <---------ATHB12          <---------AHL20(2)   --------->HSFB2a(1)      <---------LBD16   aaaaatttcgtttgttcaatgatattgaaaataatatttgttaatttataggttagagacatcgaagctttcacgtctacgatctggcattgcggcaaaa  15218800                              <---------RVE1(1)                                                     <                   --------->AHL20(2)                                                               <                   <---------AHL20(2)                                                               -                  <---------AHL20(2)                                                        ---------            <---------HSFB2a(2)                                                            <---------ANAC58         --------->GLK1(2)    <---------CCA1(1)                                            <---------ANAC55(2)      --------->ARR11(3)     --------->ARR11(3)                                            <---------ANAC46      <---------ARR11(3)     <---------ARR11(3)            <---------YAB1                  --------->ANAC55(2)    ----------->ARR10       <------ZmHOX2a(1)   --------->ANAC46                           <---------ANAC58 =====bZIP_DOF    --------->AHL20(2)            --------->ANAC58   <------MYB46(1)   <---------YAB1 - ---->DAG2  --------->HSFB2a(2)       <---------TOE2(3)  <-----------GT1       <---------AHL20(2)   - ---->DOF2 <---------LBD16<---------TOE2(3)     --------->ANAC58   <------MYB83--------->AHL20(2)----   agagattagatattctggaatttaattttaggatatttttgatgttttggacgcaaaatttacaatagttggtattcaaatttaaatctgattccgtaag  15218900  Previous    Next  AGI:  At5g38100.1    Description:  methyltransferase-related. similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G38780.1); similar to defense-related protein [Brassica carinata] (GB:AAK50345.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299) Range:  from: 15216719    to: 15218415    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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