Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->AHL20(2)                      <---------AHL20(2)                     <---------AHL20(2)                     --------->AHL20(2)       <---------ARR14(2)               ----------->GT1                --------->GLK1(2)       <---------WRKY12        ----------->HVH21 --------->TOE1(2)       <---------WRKY38(1) <---------At5g28300--------->ARR14(2)                           <---------AtMYB61      --------->WRKY18(1) <-----------GT1 --------->YAB1                                   --------->ALFIN1   --------->DAG2--------->ARR11(3)    ------>MYB46(1)  <---------WRKY18(1)      ------>NtERF2 <-----  --------->DAG2 --------->ARR14(2)    ------>MYB83    ----------->HVH21      --------->At4g35610 ---------->DOF2 <---------ARR11(3) --------->ANAC58   --------->WRKY12------->GAMYB       <---------DEAR3(1) ------------->AG<---------ARR14(2) --------->ANAC58   --------->WRKY38(1)    <---------At4g35610   <   ccaaaaaggtcaacaaggggatattaatttaccatgacaccaaatgagaatccagcgatgaccgagttttcaacggagaccgctgcgagagcgatggtgc  15192300                               ------>NtERF2              <---------ARR11(3)     --------->GLK1(2)            ----------->ARR10 --------->DEAR3(1)       --------->LBD16       <------NtERF2      <---------DEAR3(1)    ------>NtERF2     --------->SPL7        --------->DEAR3(1)                              --------->ANAC58     <---------LBD16      --------->At4g35610                              --------->ANAC58         -   <-----------HVH21      <---------ABI4(2)                    <---------ANAC58                  <--- ----At4g35610--------->ARR11(3)     <---------ARR14(2)        <---------ANAC58       <---------DAG2< ---------bZIP60(2)    --------->At4g35610            --------->AtLEC2 ------>NtERF2  <----------DOF2   tgatgtgtccggcgaagacctgagtagcagcgccgagagaatattgggttatagacatgaaaatggctggccctgccaagtaccatagctttttgacctc  15192400                                                                                         <------NtERF2                                                                                        <------NtERF2                                                                                        --------->LBD16                              <---------MYB46(3)                                        ------>NtERF2                             <---------AtMYB61                                          <---------At4g35610                             <---------DEAR3(1)                                        --------->DEAR3(1)                           ------->GAMYB                                               --------->RAP2.3(2)                         ------>MYB46(1)                                               ----------->RAV1(1)                         ------>MYB83                --------->ANAC58                  --------->RRTF1(2)                        --------->MYB52(1)           --------->ANAC46                --------->LBD16                       --------->DEAR3(1)           --------->LBD16                  ------>NtERF2                       --------->AtMYB61            <---------LBD16                 --------->ANAC46                       --------->MYB46(3)    <---------ARR14(3)               --------->ARR14(2)                      <---------MYB52(2)     <-----------ARR10                <---------ARR14(2)                     ------>NtERF2           --------->ARR14(3)            --------->ALFIN1           ----------->HVH21 --------->ALFIN1--------->ARR11(3)           <-------PIF5--------->RRTF1(1)     <---------GLK1(1)--------->MYB46(3)     <---------ARR11(3)           ------->PIF5--------->RAP2.3(1)  --------->WRKY12  --------->RAP2.6(2)      <---------ARR14(2)           <---------MYB52(1)      --- ------>MYC3     --------->ANAC46            --------->ARR14(2)        ============================RAV ------ALFIN1    --------->ANAC58        <------ZmHOX2a(1)   ---------->DOF2<---------MYB46(3)    <-- -------MYC3     --------->ANAC58   ------>ZmHOX2a(2)--------->ANAC58  <-----------RAV1(2)   --------   cacgttgaactccttgacgaagccaccaacggtggtgatcggaggaatatcttccacggatgagaaaggaagagcaggtggttcttccgccgcagataga  15192500      --------->LBD16     --------->ANAC46    <---------LBD16 <---------GLK1(1)                        <----------ID1 --------->GLK1(1)           <---------ARR14(2) ------>HSFC1(2)             --------->ARR14(2)                                                 ----- -------HSFC1(2)            <---------CCA1(2) ---------->DOF2---------->DOF2  ---------->DOF2   ----- ->CCA1(2)        ---------->ID1  --------->ANAC46      --------->ICU4 ---------->DOF2  --------->DAG2   agggtctccgtaagaattttgtcttcttccatatccacgagatagagacaaagatggaaagattaaagcatgtaaaagactaaagaccaaagagtgagca  15192600                                 --------->AHL20(2)                                 <---------ICU4                                           <----------                                --------->AHL20(2)                                      <---------AHL20(2)                                <---------AHL20(2)         ------>ZmHOX2a(1)           --------->AHL20(2)                          ----------->GT1          <---------AHL20(2)              ----------->GT1 -- ---->GLK1(2)        <---------AHL20(2)         ----------->GT1    <---------TOE2(3)   *TSS    <----- ---->ARR11(3)       --------->AHL20(2)    <---------AHL20(2) <---------ZAT6    --------->ALFIN1   <-   tcttgggattagtcatacatgaattatatagaaaataatttctgtttaataagttaatttcctaatgttaagaaatattgatgtgttgataaaattgatg  15192700                                                       <------------CBF                                                      --------->ATHB12                                                    <-----------HVH21                                                    <-----------TGA1                                                   --------->ANAC55(2)                                                   --------->bZIP60(2)                                                   --------->ANAC55(1)                                                   --------->O2                                                   <---------O2                                                   --------->TGA1a                                                   <---------ANAC55(2)                 <----------DOF2                 <------------CBF                  --------->ANAC46                  ------->TEIL         ----------->GT1                           <<<<<<<<<<HY5         --------->ANAC58        <---------TOE2(3)                          ===============================================bZIP_DOF    --------->ANAC58                               --------->ANAC58      --------->ANAC46    --------->ANAC58                               --------->ANAC58      --------->ANAC58 --CBF  --------->MYB59                           <-----------STF1--------------->AtSPL8 ------->At4g35610                     --------->AHL20(2)  <---------ANAC46   --------->ANAC58 ----REM1(1)   <---------YAB1          <---------AHL20(2)  ----------->GT1    --------->ANAC58 --------At4g35610     <---------MYB46(3)        <---------ALFIN1 --------------->AtSPL3        <----   cagcgcaagtaaggtttaaaattggtggttcagtttaaaattttaatacgaacacgtcattgggtttaatcgtacacgacaagtatggacttttcatcgt  15192800                                                                                             --------                                                                                             --------                                                                                       --------->TOE2(3)                                                                                       --------->TOE1(3)                       <----------DOF2                              --------->ZAT6     <---------MYB59                       <---------DAG2           <-------TEIL <---------ARR11(3)     ------>MYB46(1)                    <-----------GT1     <----------DOF2      --------->ARR11(3)     ------>MYB83<----               <------MYB83         <----------DOF2          --------->GLK1(2)    --------->AtMYB61 -----MYB52(1) <------MYB46(1)  --------->KAN4(2)--------->YAB1--------->TOE2(3)  <---------MYB59   tttttttttttgaatgtaggttttacttttggtttattctttcttttatattcatgaaacaaaaatcttaagactaggcccaaaccaaacctaaaccttg  15192900            <---------------AGL15      <----------DOF2 ->TOE1(3) <---------TOE2(3)                                                        --------->YAB1 ->TOE2(3)<-----------GT1  --------->TOE2(3)                                   <---------YAB1 -----WRKY18(1)    ----------->GT1       --------->MYB52(1)                 <-------TEIL   actgaacgcttttaacatttttagttaaaacttaaaacataaacaacgaatatagactgtgagagtttgtcttcgagtttcatgaatgagaagagaaggc  15193000                                                                                                   --                                                          --------->ANAC46                         --                  --------->YAB1                          --------->ANAC58         <---------MYB46(3)                --------->GLK1(2)                         --------->ANAC55(1)   --------->ANAC46   --           ---------->DOF2       ---------->DOF2          --------->ANAC58--------->TOE2(1)      <---   ----------->ARR10   <---------HSFB2a(1)               --------->SPL7   --------->TOE1(1)  <------ZmHOX2a(1)   aagagaagactctcaaagaatcagaaggtttgattcaaagttagaaaacttcaggcccatacgcaagaagcccatctcgtacaagtcgttgaagaggaag  15193100                                    <---------MYB52(1)                                  <---------ANAC58                                  <---------ANAC46                          --------->ARR11(3)                  <---------------AGL15                  <----------DOF2---------->ID1                  --------------->AGL15    --------->At4g35610   <---------ARR11(3) ----------->RAV1(2)  ---------->DOF2                 --------->ALFIN1 ------->ANAC58  --------------->AGL15          <---------HSFB2a(2) ------->ANAC58  <---------------AGL15          --------->HSFB2a(2) ------->ANAC46  --------->TOE2(3)<---------ANAC58    <---------ZAT6                        --------- ------ALFIN1   ----------------->AGL3      <----------DOF2                     <----------ID1    <--   cacgcctgcagcattgtttcctttaaaaggtctgtgtcgttttgttctttgtagaagtgttcgaacaaaacatgaaaaacaggggacaaagaatcaaaga  15193200  Previous    Next  AGI:  At5g38030.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT3G26590.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G12950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16105.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 15188476    to: 15192687    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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