Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->MYB52(1)                        <---------ALFIN1                        --------->DEAR3(1)                       <---------MYB55(2)           <---------TOE2(3)           <---------TOE1(3)  --------->ARR14(2)                                                -----      <----------DOF2  --------->MYB46(3)                             ----------------->AGL1    ----- -------->YAB1       --------->AtMYB61    --------->ANAC58        ---------->DOF2               ----- --------YAB1       --------->MYB46(3)  --------->At4g35610 --------->ANAC58                    ----- -----GT1 <---------At5g28300 <---------ARR14(2)            <----------ID1                      ----- -->ZAT6 <-----------GT1--------->AtMYB61 --------->ANAC58  --------->ANAC58     <----------ID1 <----   tatcatttcttttacggtttctaccaccaccggttttgcatcagaagcaagacgtttctaagaagccaaaatgccaaaatagagagacaaaaacacacac  15184600                                                                                --------->LBD16                                                                               --------->ANAC58                                                                               --------->ANAC46                                                                               --------->LBD16                                                                    <-----------GT1                                                             ---------->ID1    --------->ANAC58                                                         <----------DOF2      <---------LBD16                                                        <------------------------ANAC81 --------->ICU4                                        <------------------------ANAC81 ---->ANAC58                                          <-----------GT1        <---------LBD16 ---->ANAC55(2)                                    <---------ARR11(3)  <----------DOF2 ---->ANAC58         <---------AHL20(2)            --------->ARR11(3)  <---------DAG2   <---------YAB1 ---->ANAC46 ----------->GT1                       <---------GLK1(2)---------->ID1--------->ARR14(2) ---->ANAC55(1)     <---------AHL20(2)      <---------AHL20(2)     <-----------GT1<---------ARR14(2) -----ANAC55(2)     --------->AHL20(2)      --------->AHL20(2) <----------DOF2--------->LBD16 <------   gtattgatcagaaaattgttaatttaatctactggtatattgatatatatatagattttctttttcttttttcctttttccccggaacttatggttcttt  15184700                                                                                <---------LBD16                                                                                --------->LBD16                                                                        ----------->RAV1(2)                                                                       ------->TEIL    --------->ATHB12                                                                    <---------ANAC58   <---------ICU4                    <-------TEIL                                    <---------ANAC58   --------->ATHB51                <---------YAB1                                      <---------ANAC55(2)<--------HAHB4          --------->ARR11(3)                                        --------->ANAC55(2)-------->ATHB1      ---------->DOF2                           --------->AtLEC2    --------->ANAC46  --------->ICU4     <---------WRKY12                       <-----------HVH21      --------------->AtSPL8       -----     <---------WRKY38(1)                 --------->CCA1(2)         --------------->AtSPL3       <---- ----DOF2 <---------ARR11(3)           <<<<<<<<<RAP2.2        <------NtERF2<-----------HVH21 --------   ttttcagtcaaagagcttatggttcatatgtagcaaaatttagatatgtcatacaaatagtggaggcaatacgtacctgtccctcggaattattagcata  15184800                                                                <---------ICU4                                                                <---------AHL20(2)                                                                --------->ATHB51                                                                --------->AHL20(2)                                                                <--------ATHB1                                                               <---------YAB1                                                               --------->ICU4  --------->ZAT14                          ---------->DOF2   --------->YAB1 ---->MYB52(1)                    --------->ANAC58        <---------ANAC55(2) -----ARR14(2)         <---------YAB1<---------TOE2(2)    --------->ANAC55(2)     --------->AHL20(2) ->YAB1        ------>ZmHOX2a(1)  --------->ANAC58    --------->YAB1      --------->ATHB12   actgtgttctccatctcctcccttcatgcttagaacacccatgtttaaagtccctataatacataataatttgacttgattagattatatactaaatcaa  15184900                                                                         <------ZmHOX2a(2)                                            <---------AHL20(2)          --------->ARR11(3)                                         <---------AHL20(1)             <---------AGP1                                         --------->AHL20(1)             <---------ARR11(3)                                         <---------AHL20(2)             --------->AGP1                                        --------->AHL20(2)        --------->ATHB12       --------->AHL20(2)                                 <---------ANAC46                <---------YAB1          <-----------TBP                                 <---------ANAC58             <---------YAB1   <---------HSFC1(1)                           <---------ARR11(3)               ----------->GT1    <---------HSFB2a(2)            ----------->GT1--------->ARR11(3)              *TSS  --------->ICU4--------->HSFB2a(2)   --------->DAG2      ---------->DOF2  --------->YAB1    <---------ANAC46------>ZmHOX2a(2)  ---------->DOF2  <----------ID1<---------ANAC58 <---------AtLEC2<---------ICU4  <<<<<<<ZML2       <   acacaaaagtgatgccgaaaaaaaacaaagaccttgtgtgaattatatttttgcaagatgaagtgtgattattagatctatctagaaccatatatataga  15185000                                             ----------->HVH21                                         --------->ALFIN1                                   <--------                                        ------->MYC3                                       --------->AHL20(2)                                        <-------MYC2                                       <---------AHL20(1)                                        ------->MYC2                                       --------->AHL20(1)                                        <-------MYC3                                       <---------AHL20(2)                                     <---------ANAC46                             <---------ICU4                                     <---------ANAC58                             --------->ATHB12                                     <---------ANAC58                            --------->ICU4             --------->YAB1 ----------->RAV1(1)                           <---------HSFB2a(1)             <---------ICU4 <---------------AGL15                         --------->HSFB2a(1)            <---------ATHB12--------------->AGL15                  --------->ALFIN1   --------->AHL20(2)            --------->ICU4  ========================================================================= --------->YAB1 <---------ICU4--------->MYB46(3)             --------->ALFIN1    <---------YAB1 <---- ---------YAB1 <---------YAB1 <---------MYB52(2)    <-----------HVH21--------->ALFIN1 <---------AHL20(2)   ccatcataaatctaatcatcattcattttgcaacaaatggcatgtgtgtgactgtgtgagagagtgtgagtgtgggattttccatgattaaaatttattt  15185100                               --------->YAB1                               --------->TOE2(3)                       --------->AHL20(1)                       --------->AHL20(2)                       <---------AHL20(2)                    <---------ANAC58                  --------------->AGL15                      <---------ANAC58                  <---------------AGL15                      --------->ANAC55(2)                 ----------------->AGL3----------->GT1       <---------ANAC55(2)   ------>MYB46(1) <-                 ----------------->AG  <---------TOE2(3)    ------->TEIL           ------>MYB83   ---               ------>MYB46(1)----------->GT1         -------->ATHB1      <---------------------WRI1      <-----------GT1  <---------AHL20(1)             --------->ATHB51   <-----------GT1     -------- -AHL20(2)<-----------GT1 <---------YAB1             <---------YAB1   <---------ARR14(2)    --------- ==================================MADS_MADS    --------->DAG2        --------->ARR14(2)   ---------- -----AHL20(2) ------>MYB83  <---------TOE2(3) ---------->DOF2--------->TOE1(2)   ----------->RAV1(1)   cattgttttttctcaccttcccaaatttattaatgttaattaagaaaaaaaaagtattattgtacgtgagagtatttgcgataccaacaaaaaaaaagtc  15185200                 --------->ZAT18                 --------->WRKY38(1)   --------->AHL20(1)   <---------AHL20(2)  --------->AHL20(2)                      <---------TOE2(3)  <---------AHL20(2)                   <---------YAB1 <---------AHL20(2)               <---------ICU4 --------ICU4 <---------ANAC58 --------->YAB1 ------>ICU4  <---------ANAC55(2) <-----------GT1 --->GT1      <---------ANAC58<---------AHL20(2)    <---------ANAC58                           <----- >DAG2        <---------ANAC46--------->AHL20(2)    <---------ANAC58     ---------->DOF2 <---------AHL20(2) >DOF2 <-----------GT1       --------->AHL20(2)   <-----------GT1 --------->TOE2(3)     --------->ICU4   aaaattattttgcaatacgtggactgtggaaattaataactattaatgtaattttcttgtcaaaataaccaaaatgaaagaaaacaagtatttattgttt  15185300                                                         <---------ICU4                             --------->ATHB12            <--------HAHB4                          <---------AtLEC2               --------->YAB1                          --------->YAB1                 --------->ATHB12                         <-------TEIL  --------->ANAC55(2)             <---------YAB1 <---------YAB1           <---------AHL20(2)          --------------->AGL15       <---------TOE2(3) <---------YAB1--------->ARR14(2)       <-----------GT1  --------->AtLEC2 <---------AHL20(2)       <------NtERF2 ------GT1<---------------AGL15 <-------TEIL  ----------->GT1   <---------DEAR3(1)     <----------DOF2   ctattcttgtaacttaatattgcaacatgcatgattcatttatgtaatttgttattttatcattaggcgtcgaattcactaaaaaaaaactttcatttat  15185400                  <-----------GT1              <----------DOF2           <-----------GT1           <------ZmHOX2a(1)        <---------AHL20(1)    --------->AHL20(2)        --------->ARR11(3)   <---------YAB1     --------->AHL20(2)    <---------AHL20(2)     <---------AHL20(2)   --------->ICU4                                                  --------->AHL20(2)   --------->AHL20(2)     --------->AHL20(2)                             <------ZmHOX2a(1)<---------AHL20(2)   ggcatattaatatatactttatactgtatttattatttaggactctaaataacaaaaaaaaaacattttgacttaggaccctagataactatttaaatga  15185500  Previous    Next  AGI:  At5g38020.1    Description:  S-adenosyl-L-methionine:carboxyl methyltransferase family protein. similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G21950.1); similar to methyl transferase [Arabidopsis lyrata subsp. lyrata] (GB:AAP57211.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299) Range:  from: 15182882    to: 15184959    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version