Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                            <--------                                                                                <---------AHL20(2)                                                                                --------->AHL20(1)                                        --------->YAB1                          <---------AHL20(1)                                        --------->TOE2(3)                  --------->AHL20(2)<-------                                       <<<<<<<<<ARR2            <----------DOF2 --------->ARR11(3)                                       <<<<<<<<<ARR1  --------->YAB1    --------->YAB1---------->DOF2 -DOF2      <----------DOF2       --------->ANAC46    ----------->GT1  <---------ATHB12     ---------   gccatctatcgctactttctatatcacaagtgatacaaacaatcttagctatagtatcgtaattagctttcaaatcatataatatatagaaagagatatt  15152300                                                           <---------ALFIN1                                                           --------->DEAR3(1)                                                           --------->AtMYB61                 <---------ANAC58                  --------->SPL7                 --------->ANAC55(2)              ------>NtERF2                 <---------ANAC58                --------->ZAT18             <---------ANAC58                  <---------ZAT18        <---------ICU4                         <---------At4g35610    <---------YAB1                             --------->At4g35610                 <------ZmHOX2a(1) --CCA1(1)   --------->ANAC55(2)               --------->ZAT14     --------->TOE1(2)   <-----------RAV1(1) -ARR11(3)   <---------ANAC58            <-----------GT1  --------->MYB46(3)--------->ATHB12 --RVE1(1)   <---------ANAC55(2)         ------->TEIL--------->AtMYB61 <------ZmHOX2a(1) >ARR11(3) <-----------GT1  <------ZmHOX2a(1) --------->ALFIN1   <-------TEIL    <---------TOE2(3)   tgttatatcattgttacttacttgataagaggaattgtggatgtaactgtgcggaccatcaccaccgttcataggaaacgattgaggaaatgttggcatt  15152400                       ------->MYC3                       <-------MYC3                       ------->MYC2                       <-------MYC2                       <-------MYC4                       <-------PIF5                       ------->MYC4                       ------->PIF5                        <---------YAB1                      <---------O2                        <---------AHL20(2)                      --------->TGA1a                     --------->AHL20(2)                      ========================================bZIP_DOF                      --------->O2                       <---------AHL20(2)                      <---------TGA1a                    --------->YAB1                      --------->ANAC55(2)            --------->ICU4                             <----                    <------------OsbHLH66          <----------DOF2                              <----              ==================MYC_MYB            --------->TOE2(3)                         ------->MYC3              ------->GAMYB                    ---------->ID1                                <-------MYC2             <---------MYB52(2)<---------CCA1(2) ------>NtERF2                               <-------MYC3             --------->MYB46(3)<---------At4g35610<------NtERF2                      ------->TEIL  -- <----------DOF2    <---------ALFIN1         <-----------RAV1(1)       ---------->DOF2       ------->MYC2 ===============================bZIP_DOF <---------YAB1  --------->AHL20(2)  ---------->DOF2<--------   tctctttgtttttcaacgacccccacgtgtttcatctctccatatgtttgtcgccttaattaaaattaacatgtaaagaaaaagatgaatatgcatatgc  15152500                                                                                                    -                                                                    --------->ANAC55(2)    --------->ANAC58                                                                    --------->ANAC46       ----------                                                                  <-----------GT1          --------->ANAC58 -----ANAC58                                                   --------->YAB1           <---------ATHB12 -----ANAC58                         ---------->DOF2   ----------->GT1                --------->WOX13(1) ------->At4g35610               ---------->DOF2      --------------->AtSPL8    ----------->GT1   <-- -At4g35610              ----------->GT1              <---------------AtSPL8  ---------->DOF2--------   ctgctaaacaataaactgaaaatgacattgaaaaaaaaagaaagagagagagagggagagtacaatattcacataatcccaaaagtataaatcaagaaaa  15152600                                                             --------->DAG2                                                            ---------->DOF2                                                        --------------->AGL15                                                        <---------------AGL15                                                       ----------------->AGL1                                                       <-----------------AGL1                                                       ----------------->AGL2                                                     <---------WRKY18(1)                                                    ----------->HVH21                                                --------->ANAC58                                                --------->ANAC58                                              <---------TGA2(2) ---------->RAV1(2)                          ----------->HVH21     --------->ANAC58 ->GT1   --------->ANAC46                  --------->At4g35610     --------->ANAC58 ---------GT1                              <---------At4g35610--------->DAG2 ->AHL20(2)                <---------REM1(1) ----------->TGA1---------->DOF2    <---------ANAC46   taacctgatgcccacaatgctgactactggtgaagctatagcaatagctgacgcatgacccaaaaaggcactcaacattgtttcttagaggcgagagaaa  15152700                                                                                        ----------->GT1                                                                                       ----------->GT1                                                                                      <---------ANAC46                                                                 <------ZmHOX2a(1) --------->ALFIN1                                                         <-----------TBP         --------->ALFIN1                              *TSS     <------------CBF  --------->AHL20(2)      <---------ANAC58        <------ZmHOX2a(1)    <---------ANAC58        ----------->GT1             <---------ANAC58   <----------DOF2           <---------ANAC58<----------ARF1    <----------ID1   <---------ANAC46 ---   acaaactttaggagaattggttattgtttttgggtatgaagaattggaagacaagaagtttatataaggactaagagagggaagcgtgggggataaaaaa  15152800         --------->TOE1(1)         --------->TOE2(1)         ----------->GT1      --------->bZIP60(2)      <---------ZAT2     ------>NtERF2    <---------ALFIN1   --------->ATERF1(1)  <---------ATERF1(1)  ------>NtERF2                ----------->GT1  --------->TCP16(2)           <---------ZAT6 <---------PCF2        <---------TOE2(3) <---------TCP16(1)   <-----------GT1                                                       <-------GAMYB <---------PCF5 --------->AHL20(2)                                              ----------->GT1 --------->PCF2 <---------AHL20(2)     --------->GLK1(2)  <-----------GT1       <---------ZAT6 ------>ALFIN1 <---------AHL20(2)  --------->YAB1<-----------GT1        <---------TOE2(3)  <---------   ctggggccacctcgtaatttatattaacgtctagtgttaataatctatatataactcattttacaatttctattaacatatagtgttaattttctgttgg  15152900                                           <---------TOE2(2)                                      <---------ALFIN1                                    ------>ZmHOX2a(1)                                --------->ARR11(3)                                <---------ARR11(3)                               --------->GLK1(1)                               <----------TaMYB80                                           <------ZmHOX2a(2)                               <---------GLK1(1)                                           --------->ARR14(2)                              --------->ARR11(3)                                           <---------ARR14(2)                              <---------ARR11(3)                                        <---------TOE1(2)                              --------->ARR14(2)                                        --------->SPL7                              <---------ARR14(2)                                      <---------SPL7                           <---------TOE2(3)   <-------TEIL                         <-------TEIL   --                  <----------DOF2  --------->ANAC46   --------->ANAC58             <---------ARR14(2)              <---------ARR11(3)--------->ARR14(2)    --------->ANAC58    --------->HSFB2a(2)   ----- --RAV1(1)    --------->ARR11(3)<---------ARR14(2)    --------->ANAC46    <---------HSFB2a(2)------>ZmHOX2a(2)   agtaattttctcttaagatactttagttcaaggatatcctccacataggttcatacacgaactacattactagtttttagaagaggttcggacgatccga  15153000                                                       --------->ANAC55(2)                                                      <---------TOE2(3)                      ----------->HVH21              <-----------GT1                       --------->ARR11(3)                    <----------DOF2        --------->YAB1                                  <---------ARR14(2)        ----------->GT1     <------ZmHOX2a(1)   ----------->GT1                           <---------CCA1(2) --------->GT1 <---------HSFB2a(1)      <---------HSFB2a(2)                             --------->ANAC55(2) ----->DOF2    --------->HSFB2a(1)      --------->HSFB2a(2)           --------->YAB1    <---------ANAC55(2)   aagctaaaaattgtagaattttctttgacaggattagtagttctataagaaggttttacgttttttcatttagcataatcgacatccaatacatatctag  15153100                                          ---------->DOF2                                    <---------PCF5               --------->At4g35610--------->LBD16         --------->AHL20(1)      <---------LBD16                                        --------->AHL20(2)         <---------AHL20(2)     <---------LBD16                                    <----------DOF2         --------->AHL20(2)   --------->ARR14(2)         <---------DAG2       ---------->DOF2        --------->AHL20(2) --------->AtMYB61             <----------DOF2--------->HSFB2a(2)  ------>ZmHOX2a(1)       ----------------->AGL1      <-----------GT1   <---------HSFB2a(2)         <  --------->AtLEC2<-------TEIL<---------ARR14(2)  --------->YAB1        ------>ZmHOX2a(1)     <------   cttcctgcaaaaaaattagatgcattaaaccaaaaccgggaccaagaagcacttataaactttttctaaacctcctagacaaaagctttataaaatatgc  15153200  Previous    Next  AGI:  At5g37990.1    Description:  S-adenosylmethionine-dependent methyltransferase. similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G37970.1); similar to defense-related protein [Brassica carinata] (GB:AAK50345.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299) Range:  from: 15150967    to: 15152730    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version