Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <----------DOF2                                             ==========================HOX2a_HOX2a      --------->GLK1(1)                      ------>ZmHOX2a(1)    ==================================HOX2a_HOX2a    =================================HOX2a_HOX2a                                                <----    =================HOX2a_HOX2a          ---------->ID1                                   --------->AHL20(1)    <------ZmHOX2a(1)                 <---------ANAC58             <---------ALFIN1        <---------AHL20(1)  <---------TOE2(3)           <------ZmHOX2a(2)       --------->ANAC46             --------->ANAC46 -----GAMYB                   ======================HOX2a_HOX2a --------->ANAC58   --------->ANAC58 - -----YAB1                   --------->ARR11(3)       --------->ANAC58             ----------->GT1  < -----ANAC46                 <---------ARR11(3)   --------->DOF5.7(2) <---------DAG2     <---------AHL20(1) -----TOE2(3)            --------------------->WRI1 <---------DOF5.7(2)        --------->YAB1  ------ -----TOE1(3)--------->ARR11(3)       <---------ANAC58--------->ANAC58<----------DOF2    --------->AHL20(1) ----At5g28300<------ZmHOX2a(2)------>ZmHOX2a(2) <----------DOF2--------->ANAC58   --------->ANAC55(1) -->MYB52(1) <---------ARR11(3)=====================HOX2a_HOX2a ------>ZmHOX2a(2)  --------->ANAC58<-   ggttgaggaattcaagatcgagtttttctaagatcgcttcgcttgtcctttctttaacgccatcgatcgccactttctgtatcacaagtaatatatatta  15141500                            <----------DOF2                           <---------ANAC58                      --------->ATHB51                      --------->ATHB12      <---------At4g35610  <---------ANAC58  --------->TOE2(3)   <---------ICU4                                    <-------GAMYB -----AHL20(2) --------->ARR11(3)                                      <---------MYB46(3) -------->ARR11(3)   --------->ICU4                ---------->DOF2     ------>ZmHOX2a(2) ---------ARR11(3)   <---------YAB1            ----------->GT1         ===========================HOX2a_HOX2a --->AHL20(2)  <---------ARR11(3)    <---------bZIP60(1)              <---------YAB1       <------ZmHOX2a(1) --------CCA1(2) ------>ZmHOX2a(2)   --------->bZIP60(1)           <---------YAB1     --------->ATHB12   tatatcttagctaatgtgatctcattattgctttaaatcacatcatatatagtaaaagaaacttagtatatgatcgttgtaacatacttgataggaagaa  15141600                         <---------ALFIN1                         --------->DEAR3(1)                         --------->AtMYB61                 --------->SPL7                ------>NtERF2               --------->ZAT18             --------->At4g35610             --------->ZAT14                                 --------->At4g35610             <---------ZAT18   <-------TEIL                  <---------At4g35610             <---------At4g35610--------->ATHB12     <-----------RAV1(1)            --------->ALFIN1  <---------MYB52(1) <------ZmHOX2a(1)       <----------DOF2       ------->TEIL--------->AtMYB61           <---------TOE2(3)      <---------ARR11(3)         <---       <-----------GT1  --------->MYB46(3)--------->ATHB12   <---------CCA1(2)                   <---   ttgtggatgtaactgtgcggaccatcaccaccgttcattggaaacgattgaggaaatgttggcatctctctaggtctttcaactacgtccacaaatttca  15141700                                        ----------->HVH21                                      --------->ANAC55(2)             ---------->ID1           <---------ANAC55(2)           <------MYB83               --------->ANAC46           <------MYB46(1)            --------->ANAC58           <---------MYB46(3)         --------->ANAC55(1)          <---------AtMYB61           --------->bZIP60(2)          <----------ID1       <-----------RAV1(1)            ----------->GT1              --------->ANAC46     <---------MYB52(1)               --------->ANAC58             --------->ANAC58    --------->LBD16            ----------->GT1              --------->ANAC58                    <---- ------CCA1(2)                --------->DAG2                --------->ANAC58                  <------ ------At4g35610             ---------->DOF2      <---------YAB1   --------->ANAC58          --------   tctctccgtatgttggtcgtcttaatttagataaagtaacacgtaacacattataaatatgcatgctatacgaaaaataaactgagactaaaactaaaag  15141800                                                                                                 ----                                                                                                -----                                                                                            ---------                                                                                           <---------      --------->ANAC58   <---------SPL7                                                  <---------WRKY18(1)      --------->ANAC58 <---------------AtSPL3                                           ----------->HVH21   <---------ATHB12  --------->YAB1                                                   <---------AtLEC2 ------ID1      <---------DAG2               --------->ANAC46                  <---------At4g35610 ---------AtSPL8--------->TOE2(3)    --------->LBD16                           --------->At4g35610--- -->DOF2     <-----------GT1   <------ZmHOX2a(2)               <---------REM1(1)  --------->At4g35610   tacaaatcaagaaaatcaccttatcgtagtacgatcaccctgaaaacccacaatgctgacaactggtgaagctatagcaatagctgatgcatgaccccaa  15141900                                                                    <---------YAB1                                                                  --------->AHL20(2)   --------->ANAC58                                               <---------AHL20(2)   --------->ANAC58                                               <---------ICU4                  <-- ------>DOF2                     <------ZmHOX2a(1)               --------->ICU4                   <-- ----->DOF2          <---------ANAC46                            <---------YAB1                   <-- ------>AGL15        <---------ANAC58                         --------->ICU4                   ------ --------AGL1        <---------ANAC58                      ----------->GT1                     <----- ------>DAG2    --------->MYB52(2)              <---------AHL20(2)--------->ATHB51  <------------CBF   aaggcactcaacatagtttagttgcttagaagagaggaagaagtttgtattttcttacgaagagataattatttttgggtttcatgaattgggagaagaa  15142000                                                                     <---------AHL20(1)                                                                     --------->AHL20(2)                              --------->ALFIN1                       <---------AHL20(2)           ---------->DOF2   ------->MYC3            --------->YAB1 --------->AHL20(2)      <------ZmHOX2a(1)      ------->MYC2            --------->TOE2(3)     <----------ID1          <-------MYC2        <---------MYB59  --------->TOE2(3) -------DAG2--------->DAG2   <-------MYC3      ------>NtERF2    ------>MYB83 -------------AGL15        <XXXXXXXXXXXXXXXXXXXXMIR4239         ------>MYB46(1) --------DOF2             <---------ANAC58    <----------ID1   ----------->RAV1(1)               <--- --->ARR11(3)             <---------ANAC58    <---------PCF2  ------->GAMYB                     ----- ----ARR11(3)        <------ZmHOX2a(1)     --------->ALFIN1  --------->MYB46(3)            --------->HSFB2a(2)   ctttataaggacaaaaagagagaggagtgcatgtggggataacaaatggggccaaacttaataaccaacattaaattttgtagtttatgttttctcgatt  15142100                                                                                         <---------AHL20(2)                                            <------------CBF                             --------->AHL20(2)                                          <---------YAB1                              --------->YAB1                                          ------>ZmHOX2a(1)                          <---------YAB1                                         --------->TOE2(3)                         <---------ICU4                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   --------->WOX13(1)                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->AHL20(2)                                       ------>MYB83                    <---------ANAC46  --------->YAB1                  <-------TEIL         ------>MYB46(1)                <---------TOE1(2) xxxxxxxxxxxxx                 --------->AtLEC2     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------AHL20(2) --------->AHL20(2)       ----------->HVH21<---------ICU4        <---------ARR11(3)--------->YAB1 ------AHL20(2)  --------->ANAC58     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    --------->ICU4 -------- ---->AHL20(2)   --------->ANAC58    --------->AtMYB61           <-----------ARR10<---------ATHB12   aaataaaacatatggagacatgcattctatgacatgagaccatccttattgcaagtctcttactacaaatcttaggtgtaattaatcataataatatgtg  15142200                                            --------->ARR11(3)                                            <---------ARR11(3)                                    <------MYB83                                <---------AHL20(2)                                    <------MYB46(1)                            <---------AHL20(1)                                   --------->MYB111(1)                         <---------AHL20(2)                     --------->CCA1(2)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               <---------ANAC46    --------->MYB59                             --------->AHL20(2) xxxxxxxxxx>smallRNA(si3)     ---------->DOF2                               --------->YAB1 --->GT1  --------->ALFIN1  --------->CCA1(2)                              <---------YAB1--------->AHL20(2)   aatagtttagaagtgtttcttagataagagataaaagtaggtataagagcttcaaaccattacaaaaactcttagctataatttttttcaataaaacaat  15142300                                                                                                   <-                                                                                                 <---                                                                                            <--------                                                                                           --------->AHL20(1)                                                                                           <---------AHL20(1)                                                                                           --------->ARR11(3)                                                                                           <---------ARR11(3)              <----------ID1                                              <---------ANAC46 <---------AHL20(2)            ---------->DOF2          <---------TOE1(3)                 <---------AtMYB61   --------->AHL20(2)       ----------->GT1               <---------TOE2(3)       ----------->GT1        <---------ZAT6 <- --------->YAB1           --------->ZAT6<--------P           <---------ZAT6         ----------->GT1<-   tcatcaaaatagttaaaagacaaaattaagtctaccattaaggttgctctgatcaagcttgtagtgttaatttttggtgggaactagtgttaatatattt  15142400  Previous    Next  AGI:  At5g37970.1    Description:  S-adenosyl-L-methionine:carboxyl methyltransferase family protein. similar to S-adenosylmethionine-dependent methyltransferase [Arabidopsis thaliana] (TAIR:AT5G37990.1); similar to defense-related protein [Brassica carinata] (GB:AAK50345.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299) Range:  from: 15140319    to: 15141914    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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