Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->YAB1                             ------>MYB83                             ------>MYB46(1)                            ----------->RAV1(1)                           ------->GAMYB                          --------->MYB46(3)                         --------->ANAC58                         --------->ANAC58                                                 <---------ALFIN1                  <---------YAB1  --------->YAB1                                         --------->ZAT14                 <---------ARR11(3)                                                      <---------ZAT14           ------>MYB83  --------->ANAC46                          <---------YAB1  <<<<<<<<<TBF1           ------>MYB46(1)<---------MYB52(2)               <---------ANAC58    --------->ARR14(2)         --------->TOE1(2)<---------MYB55(2)               <---------ANAC58    <---------ARR14(2)   < -------DAG2 --------->YAB1--------->AtMYB61             <---------YAB1   ----------->RAV1(1)    ----   ccttactcaaacctagcatgatcatacaaccaacaatgacagcaatcgacattttcttcatgcttgattttgattccaacagttcttcttctacactctc  15101800                                                                                                    <                                                                                                 <---                                                                  ----------->GT1                ----                                                         <---------GLK1(2)                    -------                                                         --------->ARR14(2)                   <------                         ------->TEIL                    <---------ARR14(2)                   ------- ---------GLK1(2) --------->ATHB12            <---------AtMYB61 <-------GAMYB                 <------ ----->ANAC46    <-------TEIL              <----------DOF2     <-----------RAV1(1)           --------   cacaatctctctctctagcttcatttgcatcttctcaaaaaccatcttttggtgttccatattctctgttgtaatttgggacattgtttcttcaagtgca  15101900 <---------MYB52(1) --------->ARR14(2) <---------ARR14(2) ---------RAP2.6(3) ------At4g35610                                 ------>MYB46(1)           --------->ANAC58 -->NtERF2                                       ------>MYB83      --------->YAB1 -->ZAT18                                    -------->P       <-------GAMYB--------->ANAC58 ---ZAT18                                  --------->MYB46(3)----------->GT1 -->ZAT14                  <---------At4g35610  <---------ALFIN1  <---------YAB1 ---ZAT14                  --------->At4g35610 ------->GAMYB <---------MYB46(3)  ---------->DOF2 ->ALFIN1   --------->WOX13(1)          --------->REM1(1) --------->ALFIN1 --------->ANAC46     -----   gccgttcttcgagtcaatctctctatctcatctaacaatgcttcatcaacccacttgaatgtgtggttatcatcaacaagctacaaagaacagagaatta  15102000                                                                                                -----                                                                      --------->YAB1           <-----                                               --------->ALFIN1 --------->MYB52(1)             ------                                         --------->TOE2(3) --------->ANAC58                  --------                                         <---------DAG2    --------->ANAC58           <---------ARR14(2)          <---------AtLEC2            <-----------GT1 --------->At4g35610       <---------ARR14(2)    <---------AHL20(2)           --------->YAB1<-----------RAV1(1) --------->YAB1     --------->ARR14(2)   --------->AHL20(2)           <---------ATHB12      <---------At4g35610       --------->ARR14(2) ---->MYB59                   --------->WOX13(1)     ----------->RAV1(1)   <---------ANAC46  <-------   ggctataaatttgtatgaaacaactcaaatatcaatcacattaccttatgtgttgcagcataagcacaacgatagtaacgtcgatatggattcgaagcgg  15102100                                                          <---------HSFC1(2)                                                          --------->HSFC1(2)                                                          --------->HSFB2a(1)                                                          <---------HSFB2a(1)                                                         <-----------ARR10                                                         --------->GLK1(2)                                                         <---------ARR14(2)                                                         <---------ARR11(1)                                                         ------->TEIL                                                         --------->ARR14(2)                                         <----------DOF2<---------CCA1(2)                                   <---------ALFIN1   --------->ANAC58                                  ------>MYB46(1)     --------->ANAC46                                  ------>MYB83        --------->ANAC58                                 ----------->RAV1(1) --------->LBD16                               <-                             --------->ANAC46      --------->DEAR3(1)                              <- ->NtERF2                  --------->AtMYB61       --------->MYB46(3)                          <----- ----ZAT18                --------->ANAC58         --------->TOE1(2)                           ------ --->ZAT18    ------>NtERF2<---------ALFIN1       --------->ANAC58                      xxxxxxxxxxxxx ->At4g35610 --------->DEAR3(1) --------->AtMYB61 --------->ANAC58                     <---------ALFIN1 --At4g35610<------NtERF2 --------->ANAC58      <---------ALFIN1         ----------->RAV1(1) <-------   acttagacatgagcgccgagatagtagcaccacaccaacacatctttggcacacccacgaatcttcttctctgtccaacatttgatgctccactcgtagc  15102200                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                           <---------                                                                                           <--------- --------->At4g35610                                                                       <--------- <---------At4g35610                                                                    --------->GLK1(1) ----------RAV1(2)                                                                      <---------GLK1(1) --------HSFB2a(2)                                                                    <------ZmHOX2a(1) ----At4g35610                                                                     >>>>>>>ZML2 --->At4g35610                                                  ------------>CBF   <---------HSFB2a(2) xxxxxxxxxx>smallRNA(si3)                  ----------->GT1  >>>>>>>>>TBF1          --------->HSFB2a(2) --CCA1(2)        *TSS      <------------CBF       ---------->DOF2           <---------TOE2(3)     <-   tccagatgaattgctcatattcaagctcagaattgaattcgaaaatggtgaagaaaagagaagaagaacaatcgagattagggttctaggatttctcaat  15102300                                         <---------ANAC46                                         <---------ANAC58                                     <-------GAMYB     ----------->GT1                 <---------ANAC58   <------------CBF                  <---------ANAC58 ------>AGL15                       <------MYB46(1) -------AGL15                       <------MYB83                <---------AHL20(2) --->CBF                <----------DOF2  <---------ANAC58   ----------->GT1 --------AGL2       <------MYB83   <------MYB46(1)         <---------TOE2(3)                  ------- --------AGL1       <------MYB46(1)<---------MYB46(3)      <---------TOE1(3)             <---------AtMYB61 --------AGL3     --------->ALFIN1 <------MYB83     --------->HSFB2a(2)        ------>ZmHOX2a(1) --------LBD16    <--------P     <--------P         <---------HSFB2a(2)    <-----------GT1 <<<<<<<<<<MYB80   ttggggattgtatttatcgggttgggatttatcgggttgggttgtgtgatacctcgagaataaggtttaattcggtttatccttctgggttttggtttga  15102400                                                                                                 <---                                        <---------TOE2(3) --------->GLK1(2)                   <------       <---------ANAC46                <-----------GT1   <---------GLK1(2)         --------->ANAC58    --------->ARR14(2)     --------->ANAC58          <------ZmHOX2a(2)   <----------DOF2     <------- ---->HVH21 --------->YAB1 --------->ANAC58     <---------LBD16    <----------DOF2 --------->ANAC58   catcgggttctgtataataaaccgaaggcaaaccatggaattaacatttttggggatcagagtctgtaactttcgatttagggggaagcatgtttttaac  15102500                                                                       xxxxxxxxxxxxxxxx>smallRNA(i)                                                                       xxxxxxxxxxxxxxxx>smallRNA(s)                                                                       <xxxxxxxxxxxxxxxxsmallRNA(s)                                     --------->ZAT14                 xxxxxxxxxxxxxxxx>smallRNA(s)                                     <---------ZAT14                 xxxxxxxxxxxxxxxx>smallRNA(i)                                  <---------ANAC46                <------MYB83                               --------->GLK1(2)                  <------MYB46(1)                              <---------GLK1(2)                  --------->MYB111(1)                        <---------ZAT6                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -------DOF2          <---------ANAC46                          <--------P     <---------MYB46(3) -----GT1             <---------ANAC58              ----------->GT1 <xxxxxxxxxxxxxxxxsmallRNA(i) ----GT1              <---------ANAC58      <---------YAB1     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   tttcattccatggggaccgagattgagtgttagattctgtgtagttgtgatacaatgtgaaacttggtagggggacacaggtcgttctcccaaaggtttt  15102600                                                                        --------->ARR11(3)                                                                       --------->CCA1(1)                                                                    --------->YAB1                 <---------ARR11(3)                                --------->AHL20(2)                 <---------ARR11(1)                        <---------ICU4                 <-----------ARR10                         --------->YAB1                 --------->ARR11(3)                       <---------YAB1<---------ARR11(3)                <---------CCA1(2)                       <---------GLK1(1)        <---------AHL20(2)               <---------At5g28300    <---------YAB1        --------->AHL20(2)         <---------TOE2(3)   <---------ARR11(3)          ----------->GT1      <----------DOF2              <---------YAB1      --------->ARR11(3)     --------->MYB46(3)      --------->TOE2(3)           <-----------GT1     <<<<<<<<<RAP2.2  --------->RVE1(1)<-----------GT1   agttaatactttaatttcatatcttattcgatcgattaacattcaccatgttgtttagatatcattacaataaatatctaacaactggtaaaaccatatt  15102700  Previous    Next  AGI:  At5g37880.1    Description:  transposable element gene. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18420.1); similar to hypothetical protein 26.t00076 [Brassica oleracea] (GB:ABD65021.1) Range:  from: 15101690    to: 15102218    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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