Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             <-------                  --------->AHL20(2)                                                     <---------AHL20(1)                  <---------AHL20(1)                                                     --------->AHL20(1)                  <---------AHL20(2)                                                     --------->AHL20(2)        --------->AHL20(2)         --------->ARR11(3)                                    <---------AHL20(2) ->ATHB12     <---------AHL20(2)   <---------ARR11(3)               ------>ZmHOX2a(2)<---------AHL20(2) -AHL20(2)--------->AHL20(2)  --------->AHL20(1)           <-----------GT1          --------->AHL20(2) -YAB1  <---------AHL20(2)    <---------AHL20(1)        <---------ICU4          ----------->GT1  <---   gagaccatatttttatataaaaaattttaaaaaatattatcttatcgatttttgttaatttttacattgatccgacttgaaacggataaaatttattaat  15082200         <---------AHL20(2)                  <--------HAHB4      --------->AHL20(2)                     <---------ICU4      <---------AHL20(2)                     --------->ATHB12     --------->AHL20(2)                      --------->ATHB51           --------->TOE2(3)     <---------AHL20(2)                      <--------ATHB1             <----------DOF2 <<<<<<<<GATA-1                              --------->YAB1          <---------ARR11(3) ---AHL20(2)                                --------->AHL20(2)       --------->ARR11(3) -->AHL20(2)                                --------->ICU4<-----------GT1 ->AHL20(2)               <---------TOE2(3) <---------ATHB51      <-----------GT1                 --- --AHL20(2)              <-----------GT1    <---------ATHB12 --------->YAB1                       --- ------AHL20(2)  ----------->GT1       --------->YAB1    <---------AHL20(2)--------->YAB1 --------->AHL20(2)   ttatctattaatttatagagtgtttattaacatttagtatatcacaataattagtttttttaatcatataacatctttaatagccaaacaaataaaacaa  15082300                          <---------ANAC58                                ----------->GT1                          <---------ANAC46                                <----------ID1         <---------AHL20(2)--------->LBD16------->TEIL                  ---------->DOF2        --------->AHL20(2)<---------ANAC55(1)                 --------->GLK1(1)        <---------AHL20(2)<---------ANAC55(2)                 <---------GLK1(1)     <-------MYC2     --------->AHL20(2)   <---------ANAC58--------->GLK1(2)  --------->ARR14(2)     ------->MYC3    --------->AHL20(2)    --------->ANAC55(2)                <---------ARR14(2)     <-------MYC3    <---------AHL20(2) <---------ARR14(2) <---------ARR14(2) <---------GLK1(2)      ------->MYC2 ------>AHL20(2)       --------->ARR14(2) --------->ARR14(2)<------ZmHOX2a(1)      <---------ANAC58 ------>YAB1 ----------->GT1<---------MYB52(1)            <---------TOE2(3)        <---------ANAC58   taaaaaataaataaatggaaaaacagttccgtgattttgaaatgaatctggattttggtttaggattcccaaaaaaaagaaaaaaacgtgccagaccaaa  15082400                                                          --------->LBD16                                                          ------>NtERF2                                                        <------NtERF2                                                        --------->ATERF1(1)                                                        <---------LBD16                                                       --------->ABI4(1)                                                       <---------ATERF1(1)                                                       ------>NtERF2                                                      --------->ATERF1(2)                                                      --------->RAP2.3(2)                                                      --------->RAP2.3(3)                                                      --------->RRTF1(3)                                                      --------->RRTF1(2)                                                      <---------DEAR3(1)                                                      <---------ATERF1(2)                                                     --------->RAP2.3(1)                                                     --------->ERF1                                                     --------->RRTF1(1)              <---------------AGL15                  --------->RAP2.6(1)             --------->ZAT6                          <------NtERF2           ------>MYB46(1)                           --------->ATERF1(1)           ------>MYB83                              --------->DEAR4(2)          --------->MYB55(1)                         --------->ORA47(2)         <---------MYB52(2)                         ------>NtERF2         --------->AtMYB61                          <---------ATERF1(1)         <---------MYB111(2)                        --------->LBD16                            ------         <---------MYB46(2)                        --------->ANAC46                            ------         <---------MYB59                          <---------LBD16                          <---------ZAT6         <---------MYB111(1)                      --------->MYB46(3)                   <---------ZAT14        --------->ANAC55(2)                    <-----------GT1       --------->TOE2(3) --------->ZAT14        --------->ANAC46                    <---------GLK1(2)        <----------DOF2  <----------DOF2    --------->AtMYB61                 --------->WRKY12--------->DEAR3(1)        <---------ARR14(2) <-----------GT1                      --------->WRKY38(1)<---------ANAC46       --------->ARR14(2)   aaaaaacctcacctaaccctatctagagacattaacttcgttgacaaattctcccgccgccgggtatagaactttaatatcgggtccggtttactgtaag  15082500         --------->ARR14(2)   --------->MYB52(1)   ------>MYB83 <---------------AGL15   ------>MYB46(1)        --------->WOX13(1)                              ---------->DOF2 <---------MYB59--------------->AGL15                               ----------->GT1 --------->AtMYB61      ------------>CBF      --------->LBD16    <----------DOF2 --->ANAC58     ------>ZmHOX2a(1)            <---------ANAC46  --------->At4g35610     --------->WRKY18(1) --->ANAC58    ----------------->AGL2       <---------LBD16  <---------ZAT18          <-----------HVH21   aaaccaaaccgaatagtcctcaaattagcaatcgaaccggtttgagtccgggtatgaaaacagtgagctttagttaaaaagtctcatgggtcaaacagaa  15082600                                                --------->MYB46(3)                                               -------->P                                              ------->GAMYB                                             --------->MYB46(3)                                             <---------MYB55(2)             <---------At4g35610             <---------MYB111(2)             --------->At4g35610     ------>NtERF2             <---------ZAT2         --------->ANAC46           <---------WRKY12         --------->LBD16                                                <-     ---------->DOF2                <---------ETT(1)                           <---------ATHB12   <--    *TSS <-----------HVH21         --------->HSFB2a(2)                 <------ZmHOX2a(1)       ------  --------->YAB1                   <---------HSFB2a(2)               --------->ANAC58    --------->TOE2(3)  --------->TOE2(3)             ------>ZmHOX2a(1)<---------ALFIN1    --------->ANAC58    --------->TOE1(3)   gctatcttaaaggtcagctcttgatgccattctccttcccgacaacaacaaccacttctcttccattccacaaggaccacaatcacttcaaccttaatcg  15082700                          <---------AHL20(2)                                          <---------AHL20(2)                          --------->AHL20(2)                                         --------->AHL20(1)       --------->ARR14(2) --------->AHL20(1)                              --------->AHL20(2)       <---------ARR14(2)--------->ICU4                                 --------->TOE2(3)     --------->LBD16     <---------ATHB51                               <---------------AGL15   <---------LBD16       --------->AHL20(2)                             --------------->AGL15 --------ARR11(3)        <---------AHL20(2)                             <----------DOF2 -------GLK1(1)    --------->TOE2(3)       <---------MYB59 <---------ANAC46          <---------AHL20(1) --->YAB1          --------->TOE1(3)  --------->YAB1    <---------MYB52(1)<---------AHL20(2)---------   aaatctccggttttgctcaaacctgaaataatttgtacaattgtacttaactaatacagttgtgttttgtttttctttaatttgatatatatttgttttt  15082800                                                          ------>NtERF2                                                       <---------ATERF1(1)                                                       ------>NtERF2                                                      --------->ANAC58                                                      --------->ANAC58                                                      --------->DEAR3(1)                                                    <---------ATERF1(1)                                                   --------->bZIP60(1)                                                ----------->TGA1                               <-----              --------->YAB1               <------ZmHOX2a(1)                                   <-----            <---------WOX13(1)    --------->HSFB2a(2) --------->ANAC46                 <---------GLK1(2)          --------->ATHB12        <---------HSFB2a(2)--------->ATERF1(1)               --------->ARR14(2)     <---------ARR14(2)         <------ZmHOX2a(2)  <---------bZIP60(2)                 <---------ARR14(2)     --------->ARR14(2)         ==================HOX2a_HOX2a  --------->AGP1          --------->ARR11(3) ->ID1   <---------YAB1        --------->ARR11(3)  <---------bZIP60(1)                <---------At4g35610   tttagtggattttgattgataattttgttgtaagatcgagaaataggagaatgacgacgcctccagttctatctctcgctcttccttcagatactggtcg  15082900                                                                 --------->TOE2(3)                                                                <---------ICU4                                                                <--------HAHB4                      <                                                                --------->YAB1                      <                          <---------TOE1(3)                    <---------YAB1                      <-                          <---------TOE2(3)           --------->ANAC55(2)                        <---                         <-----------RAV1(2)        <-----------GT1                            ------                      <---------ZAT14               <---------AHL20(2)                        <------                      --------->ZAT14            --------->ARR11(3)                         --------- ----ANAC58       <---------ALFIN1               <---------ARR11(3)               <---------TOE1(3)<- ----ANAC58     <---------ALFIN1               <---------TOE2(3)--------->ATHB12  <---------TOE2(3)<-   tgttcttagtatccaatcccacactgttcaggtttttgttcgaactcttaagatttacttatcttatcattagaaactgtgtttaaagtttcaattttga  15083000 ---------ANAC58 ---------ANAC58 -----MYB83                                                                          <---------ANAC58 ------WOX13(1)                                                               <----------DOF2 --->ATHB12                                                             --------->GLK1(2)     ------- ---YAB1                          <----------DOF2                      <---------GLK1(2)      <------ >YAB1                   <---------DAG2                                <---------ARR11(3)<---------AtLEC2 --------MYB46(3)        <----------DOF2                          <-------TEIL<---------DAG2--------- -----MYB46(1)   --------->MYB52(1)     ------->TEIL             --------->CCA1(2)   <---------ANAC58   ttggttgcccttaagaaaaaaacagagctttttctgcttttgaatctgaatttgtttgattacaaagattcaagattctactttattccctgcatgatga  15083100  Previous    Next  AGI:  At5g37850.1    Description:  SOS4 (SALT OVERLY SENSITIVE 4); kinase/ pyridoxal kinase. Identical to Pyridoxal kinase (PK) [Arabidopsis Thaliana] (GB:Q8W1X2;GB:Q94EN4;GB:Q9FKE1); similar to putative pyridoxal kinase splice variant 1 [Brassica napus] (GB:ABE73472.1); contains InterPro domain Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase; (InterPro:IPR004625); contains InterPro domain Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749) Range:  from: 15082604    to: 15086229    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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