Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------AtMYB61         <---------ANAC58         <---------ANAC58                                                           --------->WRKY18(1)         <-------GAMYB             <---------ICU4                                  <--------ZAP1        <------MYB46(1)         <---------ICU4                                    <------MYB46(1)  --        <------MYB83           --------->AHL20(2)                                 <------MYB83    ---        <---------MYB46(3)     <---------AHL20(2)                                 ----------->GT1 <--       <---------AtMYB61       <---------ATHB51                                <---------MYB52(1)----       --------->MYB59         <---------ATHB12                             --------->MYB59      ----  <---------TOE1(3)            --------->ICU4                          --------->ICU4<---------------  --------->MYB59 <<<<<<<<<<MYB80 --------->ICU4                 --------------->AtSPL8     ---------  <---------TOE2(3)          ------>MYB83                        <---------------AtSPL8--------->ICU4 -AHL20(2) <---------MYB46(3)------>MYB46(1)                  --------->MYB111(1)--------->MYB59-----   agtttaggtttggttgttttggtttgaaaccaaataattagtagtaatacatactattacttagtagttagtactaattcggttcggtcaaaattaggca  15067100                                               -------->HAHB4                                               --------->YAB1                                               --------->ATHB51                                               <---------ICU4                                               <--------HAHB4                                              <---------ATHB51                                              <---------------AGL15                                              --------->ICU4           <----------DOF2                    <---------YAB1           <---------DAG2                --------->ANAC46       <---------ARR14(2)              <---------DOF5.7(2)     ----------->ARR10                <---------WRKY12 ------->YAB1                         <---------WRKY38(1) ------>MYB46(3)                      <---------WRKY45 -------ATHB12                       --------->WRKY18(1)    <----------ID1 ----->ANAC58     <----------DOF2  <------MYB46(1)-------->HAHB4 ----->ANAC58   ---------->ID1     <------MYB83<--------ATHB1  --------->MYB46(3) --AGL1--------->ARR14(2)         --------->MYB59<---------YAB1<---------MYB52(2) >MYB59<---------ARR11(3)       <---------ARR14(2)--------->YAB1------->GAMYB       ------>ZmHOX2a(1) ---->WOX13(1) <-----------GT1  --------->ARR14(2)--------->AHL20(2)               --------->TOE2(3)   atcaacgtagatacttttttctttttttttggcagataggtcaacgtaataattatagaaatacaacaaacacatttgactagctccttaactgctacaa  15067200                                                                                 ------>ZmHOX2a(1)                                                                               ------>ZmHOX2a(2)                 <-------TEIL        ------->GAMYB                           <---------ARR14(2)                --------->CCA1(2)   <---------MYB52(2)                   ----------->RAV1(2)        --------->ICU4              --------->MYB46(3)      --------->YAB1   --------->ARR14(2)       <-------GAMYB             <----------ID1 <-----------GT1      ---------->DOF2       --------->AHL20(2)      ----------->GT1  ----------->GT1         <-----------GT1    --------->TOE2(3)     --------->YAB1   atcgtaggcagttattagatacaaatcgtagaaatacaacaaacacattttacccatttctaacataacatcaaagcctgatcctgtttttcataaatta  15067300                                            --------->YAB1                                            -------->ATHB1                                            <---------ICU4                                           <---------ATHB12                                          ------>MYB46(1)                                          ------>MYB83                                             --                   <-----------GT1       --------->WOX13(1)                               --------->ARR11(3)         --------->At4g35610           ------------>CBF                                   <---------ARR11(3)         <---------At4g35610         <-----------GT1                                  ---------->DOF2      <-------TEIL<-----------GT1--------->CCA1(2)   <------------CBF     <-----------HVH21       ---   catctaagtacagctctatttttccaactcattagatataaaccaatcattctgtaattgtttcaactaatttctgtttcacatgtataaaagctcttca  15067400                  --------->AtMYB61                ------>MYB83               --------->ANAC46              <---------MYB55(2)              --------->MYB46(3)              ------->GAMYB               <---------DAG2            --------->ANAC58           <-----------GT1      <---------ARR11(3)  ------------>CBF<----------DOF2 ----->GAMYB--------->ANAC58      <----------DOF2     --------->AHL20(2)        ---------->DOF2 ------>MYB46(3)------>MYB46(1)<---------ARR11(3)    --------->AHL20(2)      --------->TOE2(3)   acctccaagttctcaacccaccaaaaatttcaatttcttttctacttttctccaaataaaaaactcacatccacatttttcttaaagaaaatgacttctc  15067500                                         --------->ANAC58                  <---------RAP2.6(2)                                         --------->ANAC58                 --------->ATERF1(1)                         --------->ARR11(3)                               --------->RAP2.6(3)         <------ZmHOX2a(2)            ---------->DOF2             <------ZmHOX2a(1)           ------>ZmHOX2a(1)   atggtgaagagatcgaagacgaacaaatatcaagaattgagaaaggcaattgcaaagatagccaaggaggaatggagacggccatatgtagttctcctag  15067600                                                                          <---------AHL20(1)                                                                          --------->ARR11(3)                                                                          --------->AHL20(1)                                                                         <---------AHL20(2)                           --------->YAB1                            <---------YAB1                       <---------MYB52(2)                          --------->YAB1                 --------->DAG2                                   <---------YAB1               ---------->DOF2                                  --------->YAB1             --------->ANAC46                                   --------->ATHB12           <---------------AGL15                                <---------ICU4          <-----------------AGL1                                <--------ATHB1          <-----------------AG    <-----------GT1              --------->ICU4          <----------DOF2  <---------ANAC58     --------->MYB46(3)    <---------AHL20(2)<---------YAB1    <-----------GT1  <---------ANAC58----------->GT1--------->AHL20(2)            <---------ATHB12<-----------HVH21 <---   cattgtttgccttacacaaaaggtaacaaacaaaattaactatttgttttatttcatagttaacaatgattataaatattttgtcacaactttgttgatt  15067700            <---------AHL20(2)           --------->AHL20(2)        --------->YAB1                   <---------WOX13(1)                                  <-------       <---------AHL20(2)              --------->ATHB12                                      <-------       <---------YAB1                 --------->ICU4                            <---------AtMYB61 <--    <---------AHL20(1)         --------->At4g35610                           --------->ALFIN1<-------    --------->AHL20(1)         <---------At4g35610               <---------LBD16<---------ZAT6    --- --------->AHL20(2)     <---------At4g35610              --------->YAB1    <---------ANAC46  <------- ------AHL20(2)  --------->ATHB12     <---------YAB1  --------->YAB1    --------->ALFIN1   --------->ARR11(3)   tttttatatattataaaattgattacagttgatagcagagatgattggaacctatttcataatattctctggatgtggagtagtggtagtgaatgtcttg  15067800                                  <---------ANAC58                                  <---------ANAC46                                  <---------TGA1a                                  <---------O2                                  <---------ANAC58                               ----------->HVH21                          ------>ZmHOX2a(2)        --------->YAB1  <---------ARR14(2)                                             --------->ZAT14    <------ZmHOX2a(1)   <---------ARR11(3)                                             <---------ZAT14    ============================HOX2a_HOX2a                                            <---------ZAT18    =============================HOX2a_HOX2a                                        --------->LBD16 --ANAC58               --------->ARR11(3)                         <---------ZAT14<---------LBD16 --ANAC46               --------->ARR14(2)                       --------->ZAT6 <---------ARR14(2) -------LBD16       <---------LBD16                        --------->ATHB12     --------->ARR14(2) --ANAC58  --------->YAB1<------ZmHOX2a(2)       <---------YAB1<-----------GT1 --------->GLK1(1) ------>SPL7        --------->LBD16        <---------YAB1 <---------YAB1       <---------GLK1(1) -----------SPL14  <---------LBD16<---------bZIP60(2)     --------->ICU4 <-----------HVH21      <----   tacggaggaacaataacatttccagggatctgtgtgacttggggtctcattgttatggtcatgatttactctactggtcacatttccggtgcacatttta  15067900                    <---------At4g35610               <---------TGA1a           <---------TOE1(2)               ===========================MYC_MYB      <---------MYB52(1)               <---------ANAC58      <------NtERF2--------->MYB52(2)  <---------ANAC58     <-----------TGA1             <-------GAMYB                                         <------ZmHOX2a(2)     <-----------HVH21           <---------DEAR3(2)                                     --------->CCA1(2)     ------>NtERF2<-------TEIL   <---------MYB46(3)                                    --------->ARR14(2)     <---------RAP2.6(3)        <---------DEAR3(1)                                     --------->ARR11(3)    <---------bZIP60(1)        <---------MYB52(1)                                      <---------ARR14(2)    --------->ATERF1(2)       ------>NtERF2                                            --------->AGP1    <---------ATERF1(2)      <---------LBD16                               <----------DOF2    --------->RAP2.6(2)      <---------RAP2.3(2)                 ------>ZmHOX2a(2)     <---------AGP1    --------->bZIP60(1)      <---------RAP2.6(2) <---------ANAC55(2)       <---------DAG2------>ZmHOX2a(2)  ------>NtERF2--------->TGA1a--------->LBD16    ----------->GT1--------->GLK1(1)      <---------ARR11(3) -------GT1<-----------HVH21<---------LBD16    <-----------RAV1(2)         <---------------AGL15   accctgccgtcactgtcacgttcgctgttttccggcggtttccttggtatcaggtaaatgtctctgatctctatctcctttttcaagaagatctaaaatg  15068000  Previous    Next  AGI:  At5g37820.1    Description:  NIP4;2/NLM5 (NOD26-LIKE INTRINSIC PROTEIN 4;2); water channel. Identical to Probable aquaporin NIP4-2 (NIP4-2) [Arabidopsis Thaliana] (GB:Q8W036;GB:Q9FIZ8); similar to NIP4,1/NLM4 (NOD26-LIKE INTRINSIC PROTEIN 4,1), water channel [Arabidopsis thaliana] (TAIR:AT5G37810.1); similar to Probable aquaporin NIP-type (Pollen-specific membrane integral protein) (GB:P49173); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 15067491    to: 15068772    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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