Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------MYB52(1)                                                                      <--        <---------ANAC58                              ------>MYB83  ----------->RAV1(1)          ---- ------ATHB12                              ---------->DOF2   --------->DAG2                   <------ ----GLK1(1)                         <---------AHL20(2)     ---------->DOF2                  -------- --->GLK1(1)                         --------->AHL20(2)<---------ATHB12                <---------TOE2(3) -AGL3  <---------ANAC58         <---------YAB1       ------>MYB46(1)          <---------ZAT6<------- -AG    <---------ANAC46      <---------YAB1         --------->WOX13(1)---------->DOF2---------->DOF2   tcaatatgtgtcgttagacttacaaatatagcattataaaaaaataaaagcataccaatcgaaaaagttgcaacaaagttagtgtttttaaagtattaat  15049400                              <---------AHL20(2)                              --------->AHL20(2)                          <---------AHL20(2)                         --------->AHL20(1)        ----------->GT1  <---------ARR11(3) -------AHL20(2)         --------->AHL20(2)                                                      ---- ----->AHL20(2)          <---------AHL20(2)           <---------YAB1           <---------TOE2(3) <--- ---AHL20(2)             <---------AHL20(1)     <---------AHL20(2)        <------ZmHOX2a(1)     <---- ->AHL20(2)              --------->ARR11(3)     <---------ICU4          <---------TOE2(3)   <-------- --AHL20(2)           --------->AHL20(2)    --------->AHL20(2)      <----------DOF2  --------->ATHB12   tttatctggtgagaaaatatgagataatatatttatttatgcagacttaaatatttcttattccatttttcttttaggattaagaattcattgtataatt  15049500             --------->TOE2(3)             --------->TOE1(3)             ----------->GT1        <---------ALFIN1       --------->LBD16     --------->ANAC46   --------->ANAC46 <-----------GT1                                  --------->ARR11(3)       --------->HSFB2a(2) ----->AHL20(2)                                   --------->AHL20(1)    <----------DOF2 ------AHL20(2)                      <---------------AtSPL3          <---------AHL20(2)             < -----AHL20(2)            ------->TEIL       ---------->DOF2  ----------->GT1                       - -AHL20(2)  ----------->GT1          <---------------AtSPL8------>ZmHOX2a(1)                    <----   tatataccccccaaacgttaaaaatatgtatatttgtataatgtactgaaagtatattgtcctatagttattttcttttagaattagtaatctattgtat  15049600                                                       ---------->DOF2                                                    --------->YAB1                                                 --------->WOX13(1)      ---------->ID1                      ---------->DOF2                                        ---- ---------AHL20(2)                      --------->HSFB2a(2)                               ----------- -------->AHL20(2)                      <---------HSFB2a(2)   --------->ZAT6              <---------- -----AHL20(2)<---------YAB1     <---------MYB52(1) --------->AHL20(2)<---------YAB1      --------->AHL20(2)   aattttttgtagttttattttagaatatgttttctgttttttctaaaagagcaattaaaaaggaacagtagtataattttcttatactgtttttatataa  15049700                                                           ------>NtERF2                                                          ----------->HVH21                     <xxxx                                                          --------->DEAR3(1)                 <xxxxxxx                                                         <xxxxxxxxxxxxxxxsmallRNA(le3)       <xxxxxxx                                                        <xxxxxxxxxxxxxxxxsmallRNA(le3)      ---------                                                       --------->TOE1(2)                    ------>MYB46(1)                                                       --------->TOE2(2)                    ------>MYB83                                                      <---------HSFB2a(1)        --------->ANAC58                                                      --------->HSFC1(2)         --------->ANAC58                                                      <---------HSFC1(2)       <---------ALFIN1<xxxxx                                                      --------->HSFB2a(1)    <---------ALFIN1<xxxxxxx                                                      --------->MYB46(3)  --------->ANAC46  <xxxxxxxx                                                     ------->TEIL      <xxxxxxxxxxxxxxxxxsmallRNA(si3)                                             <xxxxxxxxxxxxxxxxsmallRNA(s) ------->GAMYB   ------->GAMYB                                            <xxxxxxxxxxxxxxxxsmallRNA(s) --------->MYB46(3)--------->MYB52(1) ------->GT1   --------->YAB1              <------ZmHOX2a(1)        <-------GAMYB--------->ANAC46 ---->AGL15   <---------YAB1          <xxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxsmallRNA(se3) -----AGL15 --------->YAB1--------->AHL20(2)--------->ALFIN1       <---------MYB46(3)    --------->MYB46(3)   ggcaaaatcgccagttatcatatgaaaataaaacaatcgctagaaggaggggtcgaacctccgaccttgtggttaacagccacacgctctaaccaactga  15049800                                                                                         <---------ARR14(2)                                                                                         --------->ARR14(2)                    <---------AHL20(2)                                                   --------->GLK1(2)        <----------DOF2                                                                  <---------ARR11(3)        <---------DAG2  <---------AHL20(2)                                        --------->TOE1(2) xxxxxxxxxxxsmallRNA(le3)         <----------DOF2                               <---------------AtSPL8 xxxxxxxxxxxsmallRNA(se3)   <---------ICU4  ---------->DOF2                     --------------->AtSPL3 xxxxxxxxxxxxxxxxsmallRNA(si3)    =================================================================== -->RAV1(2)*TSS  ----------->GT1  --------------->AGL15                         --------------->AtSPL8 xxxxxxxxxxxsmallRNA(s) --------->AHL20(2) --------->AHL20(2)   ------->GAMYB  <---------DOF5.7(2) xxxxxxxxxxxsmallRNA(si3)   <---------AHL20(2)       --------->YAB1  ---------->DOF2<-------TEIL xxxxxxxxxxxsmallRNA(se3)<---------AHL20(2)<---------AHL20(2)<-----------GT1  <---------WRKY12<------   gctattccagctttttgttaagttaattaaatatttcttttaaaattaaagtctatgagaaattaaccctcaaaagctggtaaacgtacaaaatctgttg  15049900                     --------------->AGL15                     <---------------AGL15                 <----------DOF2                <---------ANAC58          <---------YAB1                                                                            <         <---------AHL20(1)                                                                       ---         <---------ARR11(3)                                                                <---------AHL20(1)         <-----------ARR10                                                                 --------->AHL20(2)         --------->ARR11(3)            ---------->DOF2                                     <---------AHL20(2)         --------->AHL20(1)    <------ZmHOX2a(2)                                           --------->YAB1        --------->RVE1(1)     --------->AGP1                                               <---------ICU4        --------->CCA1(1)     <---------ARR11(3)                                           <--------ATHB1 <---------ANAC55(2)<-----------------AGL2            <---------AHL20(2)                  --------->ICU4 ----------->GT1<---------ANAC58------>ZmHOX2a(2)    <---------AHL20(1)                   <---------YAB1 ====================================MADS_MADS       --------->AHL20(2)                --------->AHL20(2) ---MYB52(1)<----------DOF2   --------->ARR11(3)     <---------AHL20(2)  ---------->DOF2--------->YAB1   attatgtaaaatatctttgctttctaatttgagatcttattcaaagcatgagcaattttttttttttttggggtcaaaagcatgagcaaataataatttt  15050000                                                                                     --------->YAB1                                                                                    <---------YAB1                                                                                   <---------TOE2(3)                                                                                <---------WOX13(1)                                                                              --------->ATHB12                                         --------->YAB1                      <---------YAB1                                       <---------WOX13(1)               <---------ARR11(3)          --------->MYB59            --------->ATHB12                   --------->ARR11(3)    ------- ----------DOF2                 <---------YAB1                         <---------CCA1(2)     -------- ------->ID1             <---------CCA1(2)                            ------->TEIL--------->YAB1   gtcttttcgaattagatactagttttcatatattcttattcattgatatcgatactacattcacattgtatgtatatctatgattgatgataagagttgg  15050100                                                                                              <------MYB83                                                                                              <------MYB46(1)                                                                                           <---------ANAC46                                                                                           <---------ANAC58                                                                                           <---------AtLEC2                             --------->GLK1(1)                                      <---------ZAT18                             <---------GLK1(1)                                   ---------->DOF2                     --------->ATHB12                                           <---------AHL20(2)                    <---------YAB1  ---------->DOF2        <----------DOF2     --------->AHL20(2) -->ALFIN1          <---------AHL20(2)                   ---------->ID1  --------->TOE2(3) <---------ANAC58 ->ALFIN1     <---------AHL20(2)  <---------YAB1        <-----------GT1  <---------MYB59<----------DOF2   gccaaatgaaaactattttttttttattgggaattcatgaaagaaactagtttttttttttctttttgagttctacctaaaattaatgcgcttgcttggt  15050200     <---------HSFB2a(2)                                                        <----------DOF2     <-----------RAV1(2)                                              <------MYB83   <------ZmHOX2a(2)                                                  <------MYB46(1)  --------->ARR11(3)                 ------->TEIL           <---------YAB1   <------ZmHOX2a(1)  --------->AGP1           <---------ARR11(1)     <-----------GT1    <---------AtMYB61  --------->ARR14(2)     <---------SPL7  ----------->GT1  --------->YAB1   <---------TOE2(3)   <-----  <---------ARR14(2)    --------->RAP2.6(2)       <---------YAB1     --------->MYB59       <---------LBD16   tttagatccagatgtaatcgaacaggccgtatcaacatgtatatagttatttatacttgttcataataggtttggttaaggactttggaattgtccggtt  15050300  Previous    Next  AGI:  At5g37795.1    Description:  pre-tRNA. tRNA-Asn (anticodon: GTT) Range:  from: 15049738    to: 15049811    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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